Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13863
Subject:
XM_006518565.3
Aligned Length:
3027
Identities:
1397
Gaps:
1485

Alignment

Query    1  ATGGTAGCGCTGACGCTGTGGCTTCTCCCCTGGATATGCCAGTGCGTGTCGGTGCGGGCCGACTCCATCATCCA  74
            ||||.||||.||||||||||||||||.||||||||||||||||||||..|||||||||||||||||||||||||
Sbjct    1  ATGGAAGCGTTGACGCTGTGGCTTCTTCCCTGGATATGCCAGTGCGTTACGGTGCGGGCCGACTCCATCATCCA  74

Query   75  CATCGGTGCCATCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCTGAGCC  148
            |||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||||
Sbjct   75  CATCGGTGCCATCTTCGAGGAGAACGCAGCCAAGGACGACAGGGTGTTCCAGTTGGCTGTATCAGACCTGAGCC  148

Query  149  TCAACGATGACATCCTGCAGAGCGAGAAGATCACCTACTCCATCAAGGTCATCGAGGCCAACAACCCATTCCAG  222
            ||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.||.||||||
Sbjct  149  TCAATGATGACATCCTGCAGAGTGAGAAGATCACCTACTCCATCAAGGTCATCGAGGCCAATAATCCGTTCCAG  222

Query  223  GCTGTGCAGGAAGCCTGTGACCTCATGACCCAGGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTGCATCTGC  296
            ||.|||||.|||                                                              
Sbjct  223  GCGGTGCAAGAA--------------------------------------------------------------  234

Query  297  CAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGC  370
                                                                                      
Sbjct  235  --------------------------------------------------------------------------  234

Query  371  CACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTACACACTGGCTTCGAGACCACCCGTCCGC  444
                                                                                      
Sbjct  235  --------------------------------------------------------------------------  234

Query  445  CTCAATGATGTCATGCTCAGGCTGGTGACGGAGCTGCGCTGGCAGAAGTTCGTCATGTTCTACGACAGCGAGTA  518
                                                                                      
Sbjct  235  --------------------------------------------------------------------------  234

Query  519  TGATATCCGTGGGCTTCAAAGCTTTCTGGACCAGGCCTCGCGGCTGGGCCTTGACGTCTCTTTACAAAAGGTGG  592
             ||||||||||||||.||||||||.|||||.||||||||..|||||||.||.||.|||||||||||||||||||
Sbjct  235  -GATATCCGTGGGCTCCAAAGCTTCCTGGATCAGGCCTCAAGGCTGGGTCTGGATGTCTCTTTACAAAAGGTGG  307

Query  593  ACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCACGATGAAGACAGAGGAGCTGAATCGCTACCGGGAC  666
            ||||||||||.||.|||||.|||||.|||||.||||||||.||||||||.||||||||||||||||||||||||
Sbjct  308  ACAAGAACATCAGTCACGTGTTCACTAGCCTTTTCACCACCATGAAGACCGAGGAGCTGAATCGCTACCGGGAC  381

Query  667  ACGCTTCGCCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGACCAA  740
            ||.||.|||||.|||||.||.|||||||||||||||||.||.||||||||||||||.|||||.|||||||||||
Sbjct  382  ACACTGCGCCGTGCCATTCTACTGCTCAGCCCACAGGGGGCGCACTCCTTCATCAATGAGGCTGTGGAGACCAA  455

Query  741  CCTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCGGAGATCCTGGATCTGGTCC  814
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  456  CTTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCCGAGATCCTGGATCTGGTCC  529

Query  815  ATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGG  888
            |.|||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|.||||
Sbjct  530  ACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGG  603

Query  889  AACAACCACCGCATCTCCTCCCTGCTCTGCGACCCCCAGGAAGGCTACCTCCAGATGCTGCAGATCTCCAACCT  962
            ||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.|||||||||||||||||.||
Sbjct  604  AATAACCACCGCATCTCCTCCCTGCTCTGTGATCCACAGGAAGGCTACCTCCAAATGCTGCAGATCTCCAATCT  677

Query  963  CTATCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTTCACAGGAAGCTGGAGGACCGGAAGTGGCATAGCA  1036
            |||.|||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.|
Sbjct  678  CTACCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTA  751

Query 1037  TGGCGAGCCTCAACTGCATACGGAAATCCACTAAGCCATGGAATGGTGGGAGGTCCATGCTGGATACCATCAAA  1110
            ||||.|||||.||||||||.|||||.||.||.||||||||||||||.|||||.||||||||.||.||.||.|||
Sbjct  752  TGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATGGAATGGAGGGAGATCCATGCTAGACACGATTAAA  825

Query 1111  AAGGGCCACATCACTGGCCTCACTGGGGTGATGGAGTTTCGGGAGGACAGTTCGAATCCCTATGTCCAGTTTGA  1184
            |||||.||.||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.||||||||||||||
Sbjct  826  AAGGGACATATCACTGGCCTCACAGGGGTTATGGAGTTTCGGGAAGATAGCTCAAATCCTTATGTCCAGTTTGA  899

Query 1185  AATCCTTGGCACTACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGTTGGCGACATGGGACTCAGAGAAGG  1258
            ||||||||||||.||||||||||||||||||||||||||||||||||||.||||.||.||||||||.|||||||
Sbjct  900  AATCCTTGGCACAACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGCTGGCCACCTGGGACTCGGAGAAGG  973

Query 1259  GCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTC  1332
            |||||||||||||..|.||.||||||||||||||||||||||||||||||.|||||||.|||||||||||||||
Sbjct  974  GCTTGAATGGCAGTCTACAGGAGAGGCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTC  1047

Query 1333  TTGGAAGAGCCTTTCGTGATGGTGGCTGAGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGA  1406
            ||||||||||||||.||||||||.||||||||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 1048  TTGGAAGAGCCTTTTGTGATGGTAGCTGAGAATATCCTTGGACAACCCAAGCGTTACAAAGGGTTCTCCATAGA  1121

Query 1407  TGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCTGATGGCAGGTACGGTC  1480
            |||.||||||||||||||.||||||||.||.||.|||||||||||.|||||.|||||||||||||||||.||||
Sbjct 1122  TGTGCTGGATGCACTGGCTAAGGCTCTAGGATTCAAATATGAGATATACCAGGCCCCTGATGGCAGGTATGGTC  1195

Query 1481  ACCAGCTCCATAACACCTCCTGGAACGGGATGATCGGGGAGCTCATCAGCAAGAGAGCAGACTTGGCCATCTCT  1554
            |||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1196  ACCAGCTCCATAACACCTCCTGGAATGGGATGATCGGGGAGCTCATTAGCAAGAGAGCAGACTTGGCCATCTCT  1269

Query 1555  GCCATCACCATCACCCCAGAGAGGGAGAGCGTTGTGGACTTCAGCAAGCGGTACATGGACTATTCAGTGGGGAT  1628
            ||.||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct 1270  GCTATTACCATCACCCCAGAGAGAGAGAGCGTTGTGGACTTCAGCAAGCGCTACATGGACTACTCAGTGGGGAT  1343

Query 1629  TCTAATTAAGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCTTTGCTCCATTTGATTTCGCTGTGTGGGCCT  1702
            .||.||.||||||||.||||||||.|||||||||||.|||||.||.||.||.|||||.||.||.||||||||||
Sbjct 1344  CCTCATCAAGAAGCCTGAGGAGAAGATCAGCATCTTTTCCCTTTTCGCCCCCTTTGACTTTGCGGTGTGGGCCT  1417

Query 1703  GCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGAACAGGATACAGGCTGTGAGGGCTCAG  1776
            |||||||.||||||||.||||||||.||.|||||.|||||.||||||||..|||||||||||||.||..|||||
Sbjct 1418  GCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAG  1491

Query 1777  AGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATC-----------------------  1827
            |||||..|||||||..|.||.||.|||||||||||.||||||||.|||||.                       
Sbjct 1492  AGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTCTATGGAGCCTTTGT  1565

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1566  CCAGCAAGGTGGTGAGTCTTCGGTGAACTCTGTGGCCATGCGCATCGTGATGGGCAGCTGGTGGCTCTTCACCC  1639

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1640  TCATTGTGTGTTCCTCCTACACAGCCAACCTGGCCGCTTTCCTCACAGTGTCTAGGATGGACAACCCCATAAGG  1713

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1714  ACATTTCAGGACCTGTCCAAGCAACTGGAGATGTCTTATGGCACTGTCCGGGACTCTGCTGTCTATGAGTACTT  1787

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1788  CAGAGCCAAGGGGACCAATCCCCTGGAGCAGGATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATG  1861

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1862  GAGGGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTATCAGGAAGGCAAAGAAGGGGAACTACGCCTTTCTA  1935

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1936  TGGGATGTGGCCGTGGTGGAGTATGCAGCCCTGACAGATGACGACTGCTCAGTGACTGTCATCGGCAACAGCAT  2009

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2010  CAGCAGCAAGGGCTACGGGATTGCCCTGCAACATGGCAGCCCCTACAGGGACCTTTTCTCCCAGAGGATCCTGG  2083

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2084  AGCTGCAAGACACAGGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACACACAGGTCGATGTGACCTCACC  2157

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2158  AGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTGCATTTTGGC  2231

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2232  CATTGGCCTCCTTCTTGCCTGCCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGA  2305

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2306  CCCCCAAAGAGGACAAAGAAGTGAATCTGGAGCAGGTACACCGGCGCATCAACAGCCTCATGGATGAAGACATT  2379

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2380  GCTCACAAGCAAATTTCCCCAGCGTCCATTGAGCTTTCTGCCCTAGAGATGGGGGGCCTGGCTCCAAGCCAAGC  2453

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2454  TTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATG  2527

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2528  GCACCAGCCGGACACTGTCGTCAGGGCCCAGCAGCAACCTGCCACTGCCACTGAGCAGCTCAGCCACTATGCCC  2601

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2602  TCAATTCAGTGCAAACACAGGTCGCCCAATGGGGGACTGTTTCGACAGAGCCCGGTGAAGACCCCCATCCCTAT  2675

Query 1828  -------------------------------------------------------------------  1827
                                                                               
Sbjct 2676  GTCCTTCCAGCCCGTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACCTCTCATGGCACCTCCATC  2742

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