Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13878
- Subject:
- NM_001543.5
- Aligned Length:
- 2654
- Identities:
- 1640
- Gaps:
- 994
Alignment
Query 1 ATGTCTGCCCTGGCATGCCTCCGGAGGCTGTGTCGGCACGTGTCCCCGCAGGCTGTCCTTTTCCTGCTGTTAGT 74
|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|
Sbjct 1 ATGCCTGCCCTGGCATGCCTCCGGAGGCTGTGTCGGCACGTGTCCCCGCAGGCTGTCCTTTTCCTGCTGTTCAT 74
Query 75 CTTCTGCCTGTTCAGCGTTTTCATCTCGGCCTACTACCTATATGGCTGGAAGCGAGGCCTGGAGCCCTCGGCGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTCTGCCTGTTCAGCGTTTTCATCTCGGCCTACTACCTATATGGCTGGAAGCGAGGCCTGGAGCCCTCGGCGG 148
Query 149 ATGCCCCCGAGCCTGACTGCGGGGACCCGCCGCCTGTGGCCCCCAGTCGCCTGCTGCCACTCAAGCCTGTGCAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGCCCCCGAGCCTGACTGCGGGGACCCGCCGCCTGTGGCCCCCAGTCGCCTGCTGCCACTCAAGCCTGTGCAG 222
Query 223 GCAGCCACCCCTTCCCGCACAGACCCGTTGGTGCTGGTCTTTGTGGAGAGCCTCTACTCGCAACTGGGCCAGGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAGCCACCCCTTCCCGCACAGACCCGTTGGTGCTGGTCTTTGTGGAGAGCCTCTACTCGCAACTGGGCCAGGA 296
Query 297 GGTGGTGGCCATCCTGGAGTCCAGCCGCTTCAAATACCGCACAGAGATTGCGCCGGGCAAGGGTGACATGCCCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTGGTGGCCATCCTGGAGTCCAGCCGCTTCAAATACCGCACAGAGATTGCGCCGGGCAAGGGTGACATGCCCA 370
Query 371 CGCTCACTGACAAGGGCCGTGGCCGCTTCGCCCTCATCATCTATGAGAACATCCTCAAGTATGTCAACCTGGAC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CGCTCACTGACAAGGGCCGTGGCCGCTTCGCCCTCATCATCTATGAGAACATCCTCAAGTATGTCAACCTGGAC 444
Query 445 GCCTGGAACCGGGAGCTGCTGGACAAGTACTGTGTGGCCTACGGCGTGGGCATCATTGGCTTCTTCAAGGCCAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTGGAACCGGGAGCTGCTGGACAAGTACTGTGTGGCCTACGGCGTGGGCATCATTGGCTTCTTCAAGGCCAA 518
Query 519 TGAGAACAGCCTGCTGAGTGCGCAGCTCAAGGGCTTCCCCCTGTTCCTGCACTCAAACCTGGGCCTGAAGGACT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGAACAGCCTGCTGAGTGCGCAGCTCAAGGGCTTCCCCCTGTTCCTGCACTCAAACCTGGGCCTGAAGGACT 592
Query 593 GCAGCATCAACCCCAAGTCCCCGCTGCTCTACGTGACGCGACCTAGCGAGGTGGAGAAAGGTGTGCTCCCCGGC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCAGCATCAACCCCAAGTCCCCGCTGCTCTACGTGACGCGACCTAGCGAGGTGGAGAAAGGTGTGCTCCCCGGC 666
Query 667 GAGGACTGGACGGTTTTCCAGTCAAATCACTCCACCTATGAGCCAGTGCTGCTGGCCAAGACGCGCTCGTCTGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGGACTGGACGGTTTTCCAGTCAAATCACTCCACCTATGAGCCAGTGCTGCTGGCCAAGACGCGCTCGTCTGA 740
Query 741 GTCCATCCCACACCTGGGCGCAGACGCCGGCCTGCATGCTGCACTGCACGCCACTGTGGTCCAGGACCTGGGCC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCCATCCCACACCTGGGCGCAGACGCCGGCCTGCATGCTGCACTGCACGCCACTGTGGTCCAGGACCTGGGCC 814
Query 815 TGCACGACGGCATCCAGCGCGTGCTGTTTGGCAACAACCTGAACTTCTGGCTGCACAAGCTTGTCTTCGTGGAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCACGACGGCATCCAGCGCGTGCTGTTTGGCAACAACCTGAACTTCTGGCTGCACAAGCTTGTCTTCGTGGAT 888
Query 889 GCCGTGGCCTTCCTCACGGGGAAGCGCCTCTCCCTGCCATTGGACCGCTACATCCTGGTGGACATTGATGACAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCCGTGGCCTTCCTCACGGGGAAGCGCCTCTCCCTGCCATTGGACCGCTACATCCTGGTGGACATTGATGACAT 962
Query 963 CTTCGTGGGCAAGGAGGGCACACGCATGAAGGTGGAGGACGTGAAGGCCCTGTTTGACACACAGAACGAACTAC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTTCGTGGGCAAGGAGGGCACACGCATGAAGGTGGAGGACGTGAAGGCCCTGTTTGACACACAGAACGAACTAC 1036
Query 1037 GCGCACACATCCCAAACTTCACCTTCAACCTGGGCTACTCAGGGAAATTCTTCCAGACAGGTACCAATGCTGAG 1110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1037 GCGCACACATCCCAAACTTCACCTTCAACCTGGGCTACTCAGGGAAATTCTTCCACACAGGTACCAATGCTGAG 1110
Query 1111 GACGCTGGGGATGATCTGCTGCTGTCGTATGTGAAGGAGTTCTGGTGGTTCCCCCACATGTGGAGCCACATGCA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GACGCTGGGGATGATCTGCTGCTGTCGTATGTGAAGGAGTTCTGGTGGTTCCCCCACATGTGGAGCCACATGCA 1184
Query 1185 GCCCCACCTTTTCCACAACCAGTCCGTGTTGGCCGAGCAGATGGCCTTGAACAAGAAGTTCGCTGTCGAGCATG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCCCCACCTTTTCCACAACCAGTCCGTGTTGGCCGAGCAGATGGCCTTGAACAAGAAGTTCGCTGTCGAGCATG 1258
Query 1259 GCATTCCCACAGACATGGGGTATGCAGTGGCGCCCCACCACTCGGGCGTGTACCCCGTGCACGTGCAGCTGTAC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCATTCCCACAGACATGGGGTATGCAGTGGCGCCCCACCACTCGGGCGTGTACCCCGTGCACGTGCAGCTGTAC 1332
Query 1333 GAGGCTTGGAAGCAGGTGTGGAGCATCCGCGTGACCAGCACGGAGGAGTACCCCCACCTGAAGCCAGCCCGCTA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAGGCTTGGAAGCAGGTGTGGAGCATCCGCGTGACCAGCACGGAGGAGTACCCCCACCTGAAGCCAGCCCGCTA 1406
Query 1407 CCGCCGTGGCTTCATCCACAATGGCATCATGGTTCTCCCACGGCAGACCTGCGGCCTCTTCACACACACCATCT 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCGCCGTGGCTTCATCCACAATGGCATCATGGTTCTCCCACGGCAGACCTGCGGCCTCTTCACACACACCATCT 1480
Query 1481 TCTACAACGAGTACCCTGGCGGCTCCAGTGAGCTGGACAAGATCATCAACGGGGGCGAGCTCTTCCTCACCGTG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCTACAACGAGTACCCTGGCGGCTCCAGTGAGCTGGACAAGATCATCAACGGGGGCGAGCTCTTCCTCACCGTG 1554
Query 1555 CTCCTCAATCCTGTGAG-----------------TGCTCC-------------ACAGCCCATGG--CTG----- 1591
||||||||||||.|.|| || ||| ||.||| ||| |||
Sbjct 1555 CTCCTCAATCCTATCAGCATCTTCATGACGCACCTG-TCCAACTATGGGAATGACCGCC--TGGGCCTGTACAC 1625
Query 1592 ----------CTGGTG-------------------AGAA---GGGGCTGCTG-CACAG---CCTGTCTGCAGCT 1629
|||||| .||| ..||||||.| |||.| |||| |||||.|
Sbjct 1626 CTTCAAGCACCTGGTGCGCTTCCTGCACTCCTGGACGAACCTCCGGCTGCAGACACTGCCCCCTG--TGCAGTT 1697
Query 1630 GACACAG----GCTTCCTGGAG--------CCAGGAAAGGG--------TG-----------GAGAGG-CA--- 1668
|.|.||| .||||| || |.||||.|.|| || |.|||| ||
Sbjct 1698 GGCGCAGAAGTACTTCC---AGATCTTCTCCGAGGAGAAGGACCCGCTCTGGCAGGACCCCTGCGAGGACAAAC 1768
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 1769 GTCACAAAGACATCTGGTCCAAGGAGAAGACGTGTGACCGCTTCCCAAAGCTCCTCATCATCGGCCCCCAGAAA 1842
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 1843 ACAGGCACCACTGCCCTCTACCTGTTCCTGGGCATGCACCCTGACCTAAGCAGCAACTACCCCAGCTCTGAGAC 1916
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 1917 CTTTGAGGAGATCCAGTTTTTTAATGGCCACAACTATCACAAAGGCATCGACTGGTACATGGAGTTCTTCCCCA 1990
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 1991 TCCCTTCCAACACCACCTCCGACTTCTACTTTGAGAAAAGCGCCAACTACTTTGATTCAGAAGTGGCGCCCCGG 2064
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2065 CGGGCAGCAGCCCTCTTGCCCAAAGCCAAGGTCCTGACCATCCTCATCAACCCCGCGGACCGGGCCTATTCCTG 2138
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2139 GTACCAGCACCAGCGAGCCCATGACGACCCAGTGGCCCTAAAGTACACCTTCCATGAGGTGATTACCGCCGGCT 2212
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2213 CTGACGCATCCTCGAAGCTGCGTGCCCTCCAGAACCGCTGCCTGGTCCCTGGCTGGTACGCCACCCACATCGAG 2286
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2287 CGCTGGCTCAGTGCCTATCACGCCAACCAGATTCTGGTCTTGGATGGCAAACTGCTTCGCACAGAACCTGCCAA 2360
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2361 AGTGATGGACATGGTGCAGAAGTTCCTTGGGGTGACCAACACCATTGACTACCACAAAACCTTGGCGTTTGATC 2434
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2435 CAAAGAAAGGATTTTGGTGCCAACTGCTTGAAGGAGGAAAAACCAAGTGTCTGGGCAAAAGCAAGGGCCGGAAA 2508
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2509 TATCCCGAGATGGACTTGGATTCCCGAGCCTTCCTGAAGGACTATTACCGGGACCACAACATCGAGCTCTCCAA 2582
Query 1669 ---------------------------------------------------------------- 1668
Sbjct 2583 GCTGCTGTATAAGATGGGCCAGACACTTCCCACTTGGCTACGAGAGGACCTCCAGAACACCAGG 2646
