Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13896
- Subject:
- NM_001164779.2
- Aligned Length:
- 1116
- Identities:
- 710
- Gaps:
- 402
Alignment
Query 1 ATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAACTTATTGCAAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGAATATTTTAGCCCCGTGGAATTATCCTCAATTGCACATCAGCTGGATGAGGAGGAGAGGATGAGAATGGCAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGTTTAGAACTAATCCTGTTCAACAGTCCAGAGTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCAGAGGCTCAGGATCGATCCTATAAATGAAAGATCATTTATATGCAATTATAAGGAACACTGGT-----TTAC 365
|.||| || ||.|
Sbjct 1 ----------------------------------------------------ATGGA------GTCCATCTTCC 16
Query 366 A-GTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTAATATCAGATACA 438
| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17 ACG--AGAAA-------------TGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTAATATCAGATACA 75
Query 439 TATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGATCTGCCAGA 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 76 TATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGATCTGCCAGA 149
Query 513 TTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAAT 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 TTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAAT 223
Query 587 TAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 TAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGA 297
Query 661 ATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGA 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 ATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGA 371
Query 735 GGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACAC 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 GGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACAC 445
Query 809 AGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAA 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 446 AGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAA 519
Query 883 AAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGG 956
||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 520 AAGCAGCAA---------------------------CAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGG 566
Query 957 ACAGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGA 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 ACAGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGA 640
Query 1031 GTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTAGAAAACAAAAGGA 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||
Sbjct 641 GTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGA 714
Query 1105 AAAAAA 1110
||||||
Sbjct 715 AAAAAA 720