Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13896
- Subject:
- NR_031765.2
- Aligned Length:
- 6885
- Identities:
- 507
- Gaps:
- 6360
Alignment
Query 1 ATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAACTTATTGCAAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGAATATTTTAGCCCCGTGGAATTATCCTCAATTGCACATCAGCTGGATGAGGAGGAGAGGATGAGAATGGCAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGTTTAGAACTAATCCTGTTCAACAGTCCAGAGTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCAGAGGCTCAGGATCGATCCTATAAATGAAAGATCATTTATATGCAATTATAAGGAACACTGGTTTACAGTTA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTAATATCAGATACATATCTT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGATCTGCCAGATTGCGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATC--GACCA--AAACTTATTGGAGAAGAATTA 588
.|.|||.|| |.||..|| |||.| |||| .|||||...|..|.
Sbjct 1 -----------------------GTGGGGGCC----GTTGGCTCCAGACAAATAAAC---ATGGAGTCCATCTT 44
Query 589 GCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAAT 662
.||| ||| ||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45 CCAC--------GAG--AAAAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAAT 108
Query 663 GTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGG 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 109 GTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGG 182
Query 737 AAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACACAG 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 AAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACACAG 256
Query 811 ACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAA 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 257 ACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAA 330
Query 885 GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGAC 958
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 331 GCAGCAA---------------------------CAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGAC 377
Query 959 AGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGT 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 378 AGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGT 451
Query 1033 GAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTAGAAAACAAAAGGAAA 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||||
Sbjct 452 GAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAA 525
Query 1107 AAAA---------------------------------------------------------------------- 1110
||||
Sbjct 526 AAAATAATACCTTTAAAAAATAATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGT 599
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 600 CCACTTTGGTAATGTGTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTG 673
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 674 GAACAATGCGTCGGTTGTAGGACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGA 747
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 748 CATTTAAAATAGTTTTCTAAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGC 821
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 822 ATTTTTCTTGGATCTTTTTGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTT 895
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 896 TTTCTGTCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTT 969
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 970 CAGGAAAGTATCTCTACTTTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAAC 1043
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1044 TGTATACCGTGTGCTCCAGTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATT 1117
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1118 ATTTTCCCACAATTCTTTTGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCAT 1191
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1192 TATTTCATGACTGGTGCGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTT 1265
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1266 TAAAATGTGTGAGCATGTGCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTT 1339
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1340 GTTGCAACCCCTTCTTCCTGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTAT 1413
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1414 GCAGGCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCC 1487
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1488 TTCAATTTTAATAGCAGTTTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTC 1561
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1562 ATGGAATGTAGGTGTCTGCTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAA 1635
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1636 TAATTTACTAATGAAAATATGTTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAA 1709
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1710 CAATGGAAGTCACAGTACTTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTG 1783
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1784 AGATGTACAGAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGAT 1857
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1858 GTTTTAGTTTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCAT 1931
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1932 AAGCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGG 2005
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2006 CTGCACACATTTTATCAGGGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAAT 2079
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2080 ATCTTTTATTTATGATTATAAAATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAAT 2153
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2154 CAGTTTTCTGAAGTTTCCCTTACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAA 2227
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2228 ATGTTTCAGAAGAATTATAAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAA 2301
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2302 AAAGCTAAATATTTTAAGACTGAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATT 2375
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2376 TGTTCATTACCTTTTTCCATTGAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATA 2449
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2450 AAAATGAGAAAACCAATATGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAA 2523
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2524 GCACTTAAGAAAATATGGCATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGA 2597
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2598 GACGGAGTCTTGCTATGTCTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCG 2671
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2672 GGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGAT 2745
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2746 TTTTGTATTTTTGGTAGAGACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGAT 2819
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2820 CCGCCTGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTT 2893
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2894 AAAGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGC 2967
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2968 AGGCAGATCCAGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCC 3041
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3042 ATTTCTTAATTGATTGGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTAT 3115
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3116 TCAAAGCTATAGTTTATACATCAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAA 3189
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3190 TTCACAAGAACTGTCCTGCTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATG 3263
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3264 TTTAATATTTAAACTATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGT 3337
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3338 GATGCTAGTAGAAGTTTAAGCCTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTT 3411
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3412 ATGTTTTTAAAATTCAGAATAGTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAA 3485
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3486 ATATTTCAGTAATATAAACTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATT 3559
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3560 TACAATTCACAGAATATTTTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTT 3633
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3634 ATTCATGATGCCAAAGTAAATGAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTA 3707
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3708 GTCCATATTGTTTAATATTAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGT 3781
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3782 CTGAATTTTTGATACTATTTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGC 3855
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3856 ATTTTGGGAGGCCGAAGTGGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCC 3929
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3930 ATCTGTACTAAAAACTACAAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTG 4003
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4004 AGGCAGGAGAATTGCTTGAACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTG 4077
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4078 GGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAA 4151
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4152 ACCGGCCCATTGGACCTGTACAGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTA 4225
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4226 AGTAGAAAAATAAATCTTGATGTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGG 4299
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4300 GTGCAGTGGCTCACGCCTGTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTC 4373
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4374 AAGACCAGTCTGGGCAACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACA 4447
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4448 CACTTGTAATCCCAGCTACTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGG 4521
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4522 GCTCACCACTGCATTCCAGCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATA 4595
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4596 TATATATGTGTGTATATATATATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTG 4669
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4670 GCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAG 4743
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4744 CCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGT 4817
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4818 AATCCCAGTTACTTGGGAGGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGA 4891
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4892 TCGTGCCATTGCACTCTAGCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATC 4965
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 4966 CGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGAC 5039
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5040 GGAGTCTAGCTCTGCTGCCCAGGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGT 5113
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5114 TCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATT 5187
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5188 TGTTTTTTTTAGTAGAGACGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTG 5261
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5262 CCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTG 5335
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5336 AATTGTTTGTTGTATCGAGTCCTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAA 5409
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5410 CTAATCATGTCAGCAATGTAAATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCT 5483
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5484 TTATAACCAGCATCTTTTTGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATA 5557
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5558 TTTTTGTTCTAATTTGCTTTCATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTT 5631
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5632 TTTAATTTGAAGAAAATCTTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAA 5705
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5706 CGTAACTTCTAAATTTGTCGTAATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATA 5779
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5780 GACAAAGCAATGAGAAACATTAGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTC 5853
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5854 TTGCATAGTTCAAGGAATGTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTT 5927
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 5928 TTAAATGTGATTATCTAATTTTTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAA 6001
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 6002 ATATTTGAAATTCAAGTACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGT 6075
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 6076 GGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTT 6149
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 6150 ATTACACACACAGGCCTTCCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCT 6223
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 6224 GTTGTTAGTGTGGATGTTCAATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTT 6297
Query 1111 --- 1110
Sbjct 6298 CTA 6300
