Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13986
Subject:
XM_006719588.4
Aligned Length:
2730
Identities:
1620
Gaps:
1081

Alignment

Query    1  ATGGCTTGCCTCCATGAGACCCGAACACCCTCTCCTTCCTTTGGGGGCTTTGTGTCTACCCTAAGTGAGGCATC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTTGCCTCCATGAGACCCGAACACCCTCTCCTTCCTTTGGGGGCTTTGTGTCTACCCTAAGTGAGGCATC  74

Query   75  CATGCGCAAGCTGGACCCAGACACTTCTGACTGCACTCCCGAGAAGGACCTGACGCCTACCCAGTGTGTACTTC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CATGCGCAAGCTGGACCCAGACACTTCTGACTGCACTCCCGAGAAGGACCTGACGCCTACCCAGTGTGTACTTC  148

Query  149  GAGATGTGGTACCCCTTGGTGGGCAGGGTGGGGGAGGGCCCAGCCCCTCCCCAGGTGGAGAGCCGCCCCCTGAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGATGTGGTACCCCTTGGTGGGCAGGGTGGGGGAGGGCCCAGCCCCTCCCCAGGTGGAGAGCCGCCCCCTGAG  222

Query  223  CCTTTTGCCAACAGTGTCCTGCAGCTACATGAGCAGGATGCAGGGGGCCCAGGGGGAGCAGCTGGGTCACCTGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTTTTGCCAACAGTGTCCTGCAGCTACATGAGCAGGATGCAGGGGGCCCAGGGGGAGCAGCTGGGTCACCTGA  296

Query  297  GAGTCGGGCATCCAGAGTTCGAGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAGTCGGGCATCCAGAGTTCGAGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCC  370

Query  371  TCTTTGGCTGCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTTTGGCTGCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAA  444

Query  445  GACCTTTGGGAGGTCCCCTTTGAGGAAATCCTGGACCTGCAGTGGGTGGGCTCAGGGGCCCAGGGTGCTGTCTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACCTTTGGGAGGTCCCCTTTGAGGAAATCCTGGACCTGCAGTGGGTGGGCTCAGGGGCCCAGGGTGCTGTCTT  518

Query  519  CCTGGGGCGCTTCCACGGGGAGGAGGTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTGGGGCGCTTCCACGGGGAGGAGGTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACT  592

Query  593  TGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGGGTGTGTGCACCCAGGCTCCCTGCTACTGCATCCTC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGGGTGTGTGCACCCAGGCTCCCTGCTACTGCATCCTC  666

Query  667  ATGGAGTTCTGCGCCCAGGGCCAGCTGTATGAGGTACTGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGGT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATGGAGTTCTGCGCCCAGGGCCAGCTGTATGAGGTACTGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGGT  740

Query  741  TGACTGGTCCATGGGCATCGCTGGTGGCATGAACTACCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGACTGGTCCATGGGCATCGCTGGTGGCATGAACTACCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGT  814

Query  815  CACCCAACATGCTAATCACCTACGACGATGTGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACCCAACATGCTAATCACCTACGACGATGTGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGAC  888

Query  889  AAGAGCACCAAGATGTCCTTTGCAGGGACAGTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGTC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGAGCACCAAGATGTCCTTTGCAGGGACAGTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGTC  962

Query  963  TGAGAAGGTCGACATCTGGTCCTTTGGCGTGGTGCTATGGGAACTGCTGACTGGTGAGATCCCCTACAAAGACG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGAGAAGGTCGACATCTGGTCCTTTGGCGTGGTGCTATGGGAACTGCTGACTGGTGAGATCCCCTACAAAGACG  1036

Query 1037  TAGATTCCTCAGCCATTATCTGGGGTGTGGGAAGCAACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGAT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TAGATTCCTCAGCCATTATCTGGGGTGTGGGAAGCAACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGAT  1110

Query 1111  GGTTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAAACCACGAAATCGCCCATCATTCCGACAGATCCTGCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGTTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAAACCACGAAATCGCCCATCATTCCGACAGATCCTGCT  1184

Query 1185  GCATCTGGACATTGCCTCAGCTGATGTACTCTCCACACCCCAGGAGACTTACTTTAAGTCCCAGGCAGAGTGGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCATCTGGACATTGCCTCAGCTGATGTACTCTCCACACCCCAGGAGACTTACTTTAAGTCCCAGGCAGAGTGGC  1258

Query 1259  GGGAAGAAGTAAAACTGCACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GGGAAGAAGTAAAACTGCACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTG  1332

Query 1333  GTGATGAGGAGGAGGGAGGAGCTCAGACACGCCCTGGACATCAGGGAGCACTATGAAAGGAAGCTGGAGAGAGC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GTGATGAGGAGGAGGGAGGAGCTCAGACACGCCCTGGACATCAGGGAGCACTATGAAAGGAAGCTGGAGAGAGC  1406

Query 1407  CAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAG  1480

Query 1481  AGCAAGCTTTAGAGCGGAGGTGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGCCCCCAGCTTCCCTCCCTC  1554
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||            .|||.
Sbjct 1481  AGCAAGCTTTAGAGCGGAGGTGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGCC------------TCCTG  1542

Query 1555  CATGAAAGCCACTCGTATTCCTTGTAC-ATAGAGAAATATTTATATAAATNTNATATATATATACATATATATA  1627
            ||||.||.|                || ||.|||||  ..||||..|.|                        |
Sbjct 1543  CATGGAAAC----------------ACAATGGAGAA--GCTTATCAAGA------------------------A  1574

Query 1628  TATATATGCGCCACATAA----TCA---------------ACAGA-------AAGATGG-GGCTGTCC------  1668
            .|...|||.||||||.||    |||               .||||       ||||.|| |.||.|.|      
Sbjct 1575  GAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCTCAAGACGGAGTCTTTGCTCCCTA  1648

Query 1669  ---------CAGCCGTAAGTCAGG---------CTCG--------AGGG-------------AGACTGA-TCCC  1702
                     |||||.|.|||..||         ||.|        ||||             .|||.|| ||.|
Sbjct 1649  AACTAGATGCAGCCCTGAGTGGGGTGGGGCTTCCTGGGTGTCCTAAGGGCCCCCCCTCACCAGGACGGAGTCGC  1722

Query 1703  C-------------------------------------------------------------------------  1703
            |                                                                         
Sbjct 1723  CGTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGGACCTGCCTGGGCTTCGTACAGCTGT  1796

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 1797  GCCACCCCATGAACCTGGAGGACCAGGAAGCCCAGGGGGCCTAGGAGGGGGACCCTCAGCCTGGGAGGCCTGCC  1870

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 1871  CTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCATCGTCCCCAGACCTGCTGTCA  1944

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 1945  GCAGCACTAGGGTCCCGGGGCCGGGGGGCCACAGGCGGAGCTGGGGATCCTGGCTCACCACCTCCGGCCCGGGG  2018

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2019  TGACACCCCACCAAGTGAGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCTGGGGGAGCCAAAGGGGAAC  2092

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2093  CACCTCCTCCAGTAGGGCCTGGTGAAGGTGTGGGGCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGA  2166

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2167  GGAAGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGAA  2240

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2241  ACGTGGCATCTCATCGGAAGAGGAGGAAGGAGAGGTAGACAGTGAAGTAGAGCTGACATCAAGCCAGAGGTGGC  2314

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2315  CTCAGAGCCTGAACATGCGCCAGTCACTATCTACCTTCAGCTCAGAGAATCCATCAGATGGGGAGGAAGGCACA  2388

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2389  GCTAGTGAACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTC  2462

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2463  TGATGACATGTGCTCCCAGGGCTCAGAAATCCCACTGGACCCACCTCCTTCAGAGGTCATCCCTGGCCCTGAAC  2536

Query 1704  --------------------------------------------------------------------------  1703
                                                                                      
Sbjct 2537  CCAGCTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGT  2610

Query 1704  ------------------------------------------------------------------  1703
                                                                              
Sbjct 2611  GACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCA  2676

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