Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14010
- Subject:
- XR_935264.2
- Aligned Length:
- 3038
- Identities:
- 935
- Gaps:
- 2102
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTGAGTCTGCGGAGCCGCGGGCAGTGGCAGTCAGGCCTCCCCGCTCTGTGCTACCTGCGGCCCGGCTCTCCT 74
Query 1 ----------------------ATGCCGCGCTCACTGTTCAAGGGAAACTTTTGGAGTGCAGACATCCTCAGCA 52
|||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCGCGCCCCCACTCGCGCTGCGATGACGCGCTCACTGTTCAAGGGAAACTTTTGGAGTGCAGACATCCTCAGCA 148
Query 53 CCATCGGCTATGACAACATTATCCAACATCTGAACAATGGCCGCAAGAACTGCAAAGAGTTTGAAGACTTTCTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCATCGGCTATGACAACATTATCCAACATCTGAACAATGGCCGCAAGAACTGCAAAGAGTTTGAAGACTTTCTA 222
Query 127 AAAGAAAGGGCAGCAATTGAAGAGAGGTATGGCAAAGATCTGCTCAACCTCTCTAGGAAGAAGCCGTGTGGACA 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAAGAAAGGGCAGCAATTGAAGAGAGGTATGGCAAAGATCTGCTCAACCTCTCTAGGAAGAAGCCGTGTGGACA 296
Query 201 GTCTGAAATCAACACCCTGAAGCGGGCCCTTGAAGTCTTCAAGCAGCAAGTAGACAATGTGGCACAATGTCACA 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTCTGAAATCAACACCCTGAAGCGGGCCCTTGAAGTCTTCAAGCAGCAAGTAGACAATGTGGCACAATGTCACA 370
Query 275 TTCAGCTTGCACAGAGTTTAAGAGAAGAGGCCAGGAAGATGGAAGAATTCAGGGAAAAGCAAAAACTACAACGA 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCAGCTTGCACAGAGTTTAAGAGAAGAGGCCAGGAAGATGGAAGAATTCAGGGAAAAGCAAAAACTACAACGA 444
Query 349 AAAAAGACAGAGCTCATAATGGATGCTATCCATAAACAAAAGAGCTTACAATTCAAGAAAACCATGGATGCAAA 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAAAGACAGAGCTCATAATGGATGCTATCCATAAACAAAAGAGCTTACAATTCAAGAAAACCATGGATGCAAA 518
Query 423 GAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAGGCCGTCAGCCGGAGTGCCAACCTGGTGA 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAGGCCGTCAGCCGGAGTGCCAACCTGGTGA 592
Query 497 ACCCGAAGCAACAAGAAAAGCTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAGACAAAGCA 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCCGAAGCAACAAGAAAAGCTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAGACAAAGCA 666
Query 571 TACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTGAGCACATCAAGGCCTGCG---- 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTGAGCACATCAAGGCCTGCGAGCT 740
Query 641 ----------AGGCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACATGT 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTTTTCTGTAGGCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACATGT 814
Query 705 GAATCAGCTGTCACAACAATGTGTCACCAGTGATGAA------------------------------------- 741
|||||||||||||||||||||||||||||||||||||
Sbjct 815 GAATCAGCTGTCACAACAATGTGTCACCAGTGATGAAATGTACGAACAAGTCCGAAAGAGTTTAGAAATGTGCA 888
Query 742 ------------------------------------------------------------CACCCATCATGTAT 755
||||||||||||||
Sbjct 889 GCATTCAGAGGGACATTGAATACTTTGTGAATCAACGCAAAACTGGACAGATTCCACCAGCACCCATCATGTAT 962
Query 756 GAGAATTTCTACTCCTCCCAGAAGAATGCAGTCCCAGCAGGAAAGGCTACAGGGCCTAACTTGGCAAGGAGAGG 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAGAATTTCTACTCCTCCCAGAAGAATGCAGTCCCAGCAGGAAAGGCTACAGGGCCTAACTTGGCAAGGAGAGG 1036
Query 830 ACCCCTCCCAATTCCTAAAAGCTCACCAGATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATC 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCCCTCCCAATTCCTAAAAGCTCACCAGATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATC 1110
Query 904 AGTAAAATCAATGAAACCAGAGCTTTTTCCGGC----------------------------------------- 936
|||||||||||||||||||||||||||||||||
Sbjct 1111 AGTAAAATCAATGAAACCAGAGCTTTTTCCGGCTAGTGCTTCTGTGATATGGAAAGGGCACCCAGAGCAGCAGG 1184
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1185 ACCTATAGCCACGTTATGTCAGCAATGAAGACTTTGAAGTGAACCCTTGCTATAATTTTTTAGAGATTTAAAAT 1258
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1259 TTATGGTAGACATTTAGGACAACATAAGCAAGTAGAGTTCTGCAGTTTTTTGAAGTTTACAAATTGCCCCATTC 1332
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1333 TGAAGAATTATTCTTTCCCAGTTACTCAGGTTATGAATGAATTAGGTTTTCAACATGGGAAGCATGAAATCCAC 1406
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1407 TTCTGGATTTGGAGCATCCACTTGAGGAGCAGAGGTGGCAGCAGAGGATTCTGAGCCACCAACTGCAGTAGTGG 1480
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1481 CTCCTTTGGCTTTGGGCAGCCTGGCTGTGGAGTTTCCACGGCGACACACAGCCTCAGTGGTGCAAGATTTAAAA 1554
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1555 TTACCTTCCTTTTTGGCTGGAAGACTTAGAAGCCGCCTGATCATACTTTCTCATTTTACAGATGAGGAAATAAA 1628
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1629 GCCTACAAGTGTGAAATTAATTTCCTTACAGTTTTCCTAGCTGATGAGGGACAGAACCAGAACTAGAGCCTGAG 1702
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1703 CCCAACCCACATCACTATTCTTCTAACCCTTCCTGAAGTTGTGATGCTCATGCTGAAATTTAAGATGCCAAATA 1776
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1777 TTTTTGCCAGCACTTTTTCAGTTGGGAGAATCACCAGGGTTTAAATGTCAGATTTATTTTTATGTGGATCCCTG 1850
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1851 TGTATGCTGAACTACAGAGCATGATGTTTAATCTAATTTAAGGAGCCACTGATTGTAAAACATGCCATTATTTT 1924
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1925 ATGTTGCACTAAGAAGGTGGGGTCGAGGAGTTGCCAATAAACTTGGGACAGACTATTGATGGCCAAGCCCATCT 1998
Query 937 -------------------------------------------------------------------------- 936
Sbjct 1999 GAATTTAAGATGCTAAAGTATGAAAAAAATACATCTTAGAATCAATGAAATACCATATTTTGATTCCATTCCTC 2072
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2073 AAGATAATTTTAGAGTTATAAAACCAGTCCTCAATTTTGGGTCTTCACAGAGAATCTTTCCCTTGCTAGACCCC 2146
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2147 AGAATTTTAAATGCATCCGTCTTACACTTTCACAAATATTTGGGTTTTCCTTTTTCACTCACAAACAGCAGGGA 2220
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2221 GGTCATGTACTTTTTGTACAACACCTGTGCACTATGAGAAAATGGTACCTTTTAGTTATTGACAAGTTAAAATA 2294
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2295 GCACTCTCAGTTTTTCAGTATTACAGAGAGCAAATAGTTTCCTCTCCTGCTCTGTGCAGTAGCTTTTCCAGAAC 2368
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2369 TATGGACAAATTGATCAGAAGAAGATTGATTATTTCCTCATCTTTTTTTCTTTTTTTTGAGACAGAGTCTCTCT 2442
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2443 CTGTCCCCCAGGCTGAAGTGCAGCGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTC 2516
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2517 TCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACACCTGGCTAATTTTTTGTATTTTTA 2590
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2591 GTAAAGACAGGGTTTTACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGC 2664
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2665 CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTATTTCCCCACCTTTCGTGTAAGGTGCTA 2738
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2739 CTGAACATGACAGCTTCTTGTCATGACAGGAAACTTGCATCAGTTGGATATCCTTTTGAGAAACTGAATTTTGC 2812
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2813 AAAGGGCCAAATTTCCCCAAACTGAACGGGCTCAGGAAATGTTCCTTTACACTCAGAACATTCTATTTTAAGTA 2886
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2887 TATTATTTATTGTTGGCAGTTCCTCAGGGATTTCCCTTTTCTCTGTATTGGTCAGTGTAGTTGATGTAAAACCG 2960
Query 937 -------------------------------------------------------------------------- 936
Sbjct 2961 TTTTGTGGATGGAAAATATTTTTATTTTATTGCTCTTTTAGTTTGGTAGGTTAAATAAAGGTTCTTGGTAATTT 3034
Query 937 ---- 936
Sbjct 3035 GGGA 3038
