Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14010
Subject:
XR_935264.2
Aligned Length:
3038
Identities:
935
Gaps:
2102

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTTGAGTCTGCGGAGCCGCGGGCAGTGGCAGTCAGGCCTCCCCGCTCTGTGCTACCTGCGGCCCGGCTCTCCT  74

Query    1  ----------------------ATGCCGCGCTCACTGTTCAAGGGAAACTTTTGGAGTGCAGACATCCTCAGCA  52
                                  |||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCGCGCCCCCACTCGCGCTGCGATGACGCGCTCACTGTTCAAGGGAAACTTTTGGAGTGCAGACATCCTCAGCA  148

Query   53  CCATCGGCTATGACAACATTATCCAACATCTGAACAATGGCCGCAAGAACTGCAAAGAGTTTGAAGACTTTCTA  126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCATCGGCTATGACAACATTATCCAACATCTGAACAATGGCCGCAAGAACTGCAAAGAGTTTGAAGACTTTCTA  222

Query  127  AAAGAAAGGGCAGCAATTGAAGAGAGGTATGGCAAAGATCTGCTCAACCTCTCTAGGAAGAAGCCGTGTGGACA  200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAAGAAAGGGCAGCAATTGAAGAGAGGTATGGCAAAGATCTGCTCAACCTCTCTAGGAAGAAGCCGTGTGGACA  296

Query  201  GTCTGAAATCAACACCCTGAAGCGGGCCCTTGAAGTCTTCAAGCAGCAAGTAGACAATGTGGCACAATGTCACA  274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTCTGAAATCAACACCCTGAAGCGGGCCCTTGAAGTCTTCAAGCAGCAAGTAGACAATGTGGCACAATGTCACA  370

Query  275  TTCAGCTTGCACAGAGTTTAAGAGAAGAGGCCAGGAAGATGGAAGAATTCAGGGAAAAGCAAAAACTACAACGA  348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTCAGCTTGCACAGAGTTTAAGAGAAGAGGCCAGGAAGATGGAAGAATTCAGGGAAAAGCAAAAACTACAACGA  444

Query  349  AAAAAGACAGAGCTCATAATGGATGCTATCCATAAACAAAAGAGCTTACAATTCAAGAAAACCATGGATGCAAA  422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAAAGACAGAGCTCATAATGGATGCTATCCATAAACAAAAGAGCTTACAATTCAAGAAAACCATGGATGCAAA  518

Query  423  GAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAGGCCGTCAGCCGGAGTGCCAACCTGGTGA  496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAGGCCGTCAGCCGGAGTGCCAACCTGGTGA  592

Query  497  ACCCGAAGCAACAAGAAAAGCTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAGACAAAGCA  570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACCCGAAGCAACAAGAAAAGCTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAGACAAAGCA  666

Query  571  TACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTGAGCACATCAAGGCCTGCG----  640
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  667  TACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTGAGCACATCAAGGCCTGCGAGCT  740

Query  641  ----------AGGCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACATGT  704
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATTTTTCTGTAGGCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACATGT  814

Query  705  GAATCAGCTGTCACAACAATGTGTCACCAGTGATGAA-------------------------------------  741
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct  815  GAATCAGCTGTCACAACAATGTGTCACCAGTGATGAAATGTACGAACAAGTCCGAAAGAGTTTAGAAATGTGCA  888

Query  742  ------------------------------------------------------------CACCCATCATGTAT  755
                                                                        ||||||||||||||
Sbjct  889  GCATTCAGAGGGACATTGAATACTTTGTGAATCAACGCAAAACTGGACAGATTCCACCAGCACCCATCATGTAT  962

Query  756  GAGAATTTCTACTCCTCCCAGAAGAATGCAGTCCCAGCAGGAAAGGCTACAGGGCCTAACTTGGCAAGGAGAGG  829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAGAATTTCTACTCCTCCCAGAAGAATGCAGTCCCAGCAGGAAAGGCTACAGGGCCTAACTTGGCAAGGAGAGG  1036

Query  830  ACCCCTCCCAATTCCTAAAAGCTCACCAGATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATC  903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACCCCTCCCAATTCCTAAAAGCTCACCAGATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATC  1110

Query  904  AGTAAAATCAATGAAACCAGAGCTTTTTCCGGC-----------------------------------------  936
            |||||||||||||||||||||||||||||||||                                         
Sbjct 1111  AGTAAAATCAATGAAACCAGAGCTTTTTCCGGCTAGTGCTTCTGTGATATGGAAAGGGCACCCAGAGCAGCAGG  1184

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1185  ACCTATAGCCACGTTATGTCAGCAATGAAGACTTTGAAGTGAACCCTTGCTATAATTTTTTAGAGATTTAAAAT  1258

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1259  TTATGGTAGACATTTAGGACAACATAAGCAAGTAGAGTTCTGCAGTTTTTTGAAGTTTACAAATTGCCCCATTC  1332

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1333  TGAAGAATTATTCTTTCCCAGTTACTCAGGTTATGAATGAATTAGGTTTTCAACATGGGAAGCATGAAATCCAC  1406

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1407  TTCTGGATTTGGAGCATCCACTTGAGGAGCAGAGGTGGCAGCAGAGGATTCTGAGCCACCAACTGCAGTAGTGG  1480

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1481  CTCCTTTGGCTTTGGGCAGCCTGGCTGTGGAGTTTCCACGGCGACACACAGCCTCAGTGGTGCAAGATTTAAAA  1554

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1555  TTACCTTCCTTTTTGGCTGGAAGACTTAGAAGCCGCCTGATCATACTTTCTCATTTTACAGATGAGGAAATAAA  1628

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1629  GCCTACAAGTGTGAAATTAATTTCCTTACAGTTTTCCTAGCTGATGAGGGACAGAACCAGAACTAGAGCCTGAG  1702

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1703  CCCAACCCACATCACTATTCTTCTAACCCTTCCTGAAGTTGTGATGCTCATGCTGAAATTTAAGATGCCAAATA  1776

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1777  TTTTTGCCAGCACTTTTTCAGTTGGGAGAATCACCAGGGTTTAAATGTCAGATTTATTTTTATGTGGATCCCTG  1850

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1851  TGTATGCTGAACTACAGAGCATGATGTTTAATCTAATTTAAGGAGCCACTGATTGTAAAACATGCCATTATTTT  1924

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1925  ATGTTGCACTAAGAAGGTGGGGTCGAGGAGTTGCCAATAAACTTGGGACAGACTATTGATGGCCAAGCCCATCT  1998

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 1999  GAATTTAAGATGCTAAAGTATGAAAAAAATACATCTTAGAATCAATGAAATACCATATTTTGATTCCATTCCTC  2072

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2073  AAGATAATTTTAGAGTTATAAAACCAGTCCTCAATTTTGGGTCTTCACAGAGAATCTTTCCCTTGCTAGACCCC  2146

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2147  AGAATTTTAAATGCATCCGTCTTACACTTTCACAAATATTTGGGTTTTCCTTTTTCACTCACAAACAGCAGGGA  2220

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2221  GGTCATGTACTTTTTGTACAACACCTGTGCACTATGAGAAAATGGTACCTTTTAGTTATTGACAAGTTAAAATA  2294

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2295  GCACTCTCAGTTTTTCAGTATTACAGAGAGCAAATAGTTTCCTCTCCTGCTCTGTGCAGTAGCTTTTCCAGAAC  2368

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2369  TATGGACAAATTGATCAGAAGAAGATTGATTATTTCCTCATCTTTTTTTCTTTTTTTTGAGACAGAGTCTCTCT  2442

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2443  CTGTCCCCCAGGCTGAAGTGCAGCGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTC  2516

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2517  TCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACACCTGGCTAATTTTTTGTATTTTTA  2590

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2591  GTAAAGACAGGGTTTTACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGC  2664

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2665  CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTATTTCCCCACCTTTCGTGTAAGGTGCTA  2738

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2739  CTGAACATGACAGCTTCTTGTCATGACAGGAAACTTGCATCAGTTGGATATCCTTTTGAGAAACTGAATTTTGC  2812

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2813  AAAGGGCCAAATTTCCCCAAACTGAACGGGCTCAGGAAATGTTCCTTTACACTCAGAACATTCTATTTTAAGTA  2886

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2887  TATTATTTATTGTTGGCAGTTCCTCAGGGATTTCCCTTTTCTCTGTATTGGTCAGTGTAGTTGATGTAAAACCG  2960

Query  937  --------------------------------------------------------------------------  936
                                                                                      
Sbjct 2961  TTTTGTGGATGGAAAATATTTTTATTTTATTGCTCTTTTAGTTTGGTAGGTTAAATAAAGGTTCTTGGTAATTT  3034

Query  937  ----  936
                
Sbjct 3035  GGGA  3038

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