Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14024
- Subject:
- XM_011242560.2
- Aligned Length:
- 6200
- Identities:
- 850
- Gaps:
- 5245
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGTCCTCAATACATTCTGAAGAGGATGATTTTGTTCCAGAGCTACATAGAAATGTTCACCCCCGAGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTGATTGGGAGGAAACACTCAGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATCCCTGGAGACCTGACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTAAGTCCTGTGGCAGTACAGCGAGCACGAAGGTTAAGCATGTGAAGAAGTCCACCCCTCCTGGACTGATGGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGACAACATTCACAGGTTACCCTTCACAAAGGGACACTTTCCAAAGATGGCTGAATGTGCACATTTTCATTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGAACGTGGAGTTTGGCAGCATACAGCTCTCACTATCAGAAGAACAGAATGAAGTAATGAAAAATGGCTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCTAAAGAGCTGGTCTACCTCGTGCAGATTGCCTGTCAGGGCAAGAGTTGGATTGTTAAAAGAAGTTATGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATTTTCGGGTACTCGACAAACATCTTCATCTCTGCATTTATGACCGCCGATTCTCCCAGCTCACAGAGCTTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGCTCTGACGTCCTGAAGGACAGTCCTGAGTCGGTTACTCAGATGCTTACAGCTTACCTGTCACGCCTTTCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTATCGCTGGCAACAAGATCAACTGTGGGCCTGCCCTTACCTGGATGGAGATCGACAATAAGGGAAACCATCTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTAGTTCACGAGGAGTCGTCCATCAACACTCCTGCTGTCGGTGCTGCCCATGTTATCAAGCGCTACACCGCTCG 740
Query 1 ----------------------------------------------------ATGCCCCCGAAAGTGTTAAGCA 22
|||||.||.|||||.|||||||
Sbjct 741 GGCCCCTGATGAACTGACATTAGAGGTGGGAGACATCGTTTCTGTTATTGACATGCCTCCCAAAGTATTAAGCA 814
Query 23 CATGGTGGAGAGGCAAGCACGGATTCCAGGTGGGACTCTTCCCTGGACACTGTGTTGAGTTAATTAACCAAAAA 96
|||||||||||||||||||.|||||.||||||||||||||||||||.||.|||||.||||||||||||||.|||
Sbjct 815 CATGGTGGAGAGGCAAGCATGGATTTCAGGTGGGACTCTTCCCTGGTCATTGTGTCGAGTTAATTAACCAGAAA 888
Query 97 GTTCCCCAGTCAGTGACCAACTCAGTGCCAAAACCAGTGTCTAAAAAGCACGGCAAGCTCATTACGTTCTTACG 170
|||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 889 GTTCCTCAGTCAGTAACCAACTCAGTGCCAAAACCAGTGTCTAAAAAGCACGGCAAGCTCATTACTTTCTTGCG 962
Query 171 AACATTCATGAAGTCTCGTCCAACAAAACAGAAGCTGAAGCAGCGGGGAATCTTGAAAGAGAGGGTGTTTGGTT 244
||||||||||||||||||.|||||||||||||||||.|||||||||||.||||||||||||||.||.||.||||
Sbjct 963 AACATTCATGAAGTCTCGCCCAACAAAACAGAAGCTAAAGCAGCGGGGCATCTTGAAAGAGAGAGTATTCGGTT 1036
Query 245 GTGACCTGGGGGAGCACCTTCTAAATTCTGGTTTTGAAGTGCCGCAGGTTCTTCAAAGCTGCACAGCATTCATT 318
|||||.|||||||||||||.||.||||||||.|||||||||||.|||||||||||.|||||||||||.|||||.
Sbjct 1037 GTGACTTGGGGGAGCACCTCCTCAATTCTGGGTTTGAAGTGCCCCAGGTTCTTCAGAGCTGCACAGCGTTCATC 1110
Query 319 GAGAGATATGGCATCGTGGATGGAATCTATCGCCTTTCTGGTGTTGCCTCCAATATCCAGAGACTACGCCATGA 392
|||||.||||||||.||||||||.||.|||||.||.|||||.|||||||||||||||||||||||.||.|||||
Sbjct 1111 GAGAGGTATGGCATTGTGGATGGGATATATCGTCTCTCTGGCGTTGCCTCCAATATCCAGAGACTTCGTCATGA 1184
Query 393 ATTTGACTCTGAGCACGTCCCCGACCTGACGAAAGAACCGTATGTTCGGGACATCCATTCTGTGGGTTCCCTAT 466
||||||.||||||||.||||||||||||||.||||||||.|||||||..|||||||||||||||||.|||||.|
Sbjct 1185 ATTTGATTCTGAGCATGTCCCCGACCTGACAAAAGAACCTTATGTTCAAGACATCCATTCTGTGGGCTCCCTCT 1258
Query 467 GTAAGCTGTACTTCCGGGAACTCCCAAACCCTCTGCTTACCTACCAGCTGTATGAGAAATTTTCTGATGCAGTT 540
||||||||||||||||.||||||||||||||||||||.|||||||||||.||.|||||.||.||||||||.|||
Sbjct 1259 GTAAGCTGTACTTCCGAGAACTCCCAAACCCTCTGCTCACCTACCAGCTATACGAGAAGTTCTCTGATGCTGTT 1332
Query 541 TCAGCAGCAACAGATGAAGAAAGGCTGATAAAAATCCACGATGTCATCCAGCAGCTCCCCCCACCACACTACAG 614
|||||||||||.|||||||||.||.|||||||||||||.||||||||||||||.|||||||||||||||||.||
Sbjct 1333 TCAGCAGCAACGGATGAAGAACGGTTGATAAAAATCCATGATGTCATCCAGCAACTCCCCCCACCACACTATAG 1406
Query 615 AACACTGGAGTTCCTGATGAGACACTTGTCTCTTCTAGCTGACTATTGTTCCATCACAAATATGCATGCAAAAA 688
|||.|||||||||||||||||||||.|||||||||||||.||||||||.||||||||||||||||||||.||||
Sbjct 1407 AACCCTGGAGTTCCTGATGAGACACCTGTCTCTTCTAGCAGACTATTGCTCCATCACAAATATGCATGCGAAAA 1480
Query 689 ATCTAGCAATTGTTTGGGCTCCAAACCTGTTAAGATCAAAACAGATAGAATCTGCCTGCTTCAGTGGAACAGCA 762
|.||.||.|||||.|||||.|||||||||.|.||||||||.||||||||.||.||.|||||||||||.||||||
Sbjct 1481 ACCTTGCCATTGTGTGGGCACCAAACCTGCTGAGATCAAAGCAGATAGAGTCAGCTTGCTTCAGTGGGACAGCA 1554
Query 763 GCTTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGAGTTCATCCTGAATCACGTTGATGTGCTGCT------ 830
||||||||||||||||||||||||||||||||||||||.|||||.||.|||||.||.|||||||| ||
Sbjct 1555 GCTTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGAATTCATTCTCAATCATGTGGATGTGCT-CTTCAGTG 1627
Query 831 GCCACACTTCAGCG----CACGCA--------CAGAACTAATC-------------GTCCC---------CTTC 870
||.|.| |||||| ||.||| ||| ||..|| ||||| |.||
Sbjct 1628 GCAAAA--TCAGCGCTGTCATGCAGGAAGGAGCAG--CTTCTCTGTCAAGGCCCAAGTCCCTGCTGGTCTCGTC 1697
Query 871 CCCCTCCGCC------------TT--------CTCAGAAAA-----------CAGTTTACTCCTCCT-TTGCTA 912
.||.||..|| || |.|||..|| |||.|.|.|.||||| |||..|
Sbjct 1698 TCCATCTACCAAGCTGCTGACATTGGAGGAAGCCCAGGCAAGGACGCAGGCTCAGGTCAGTTCTCCTATTGTGA 1771
Query 913 ------------------------------GGCCCGATG----------------TCA---------------- 924
||||.|.|| |||
Sbjct 1772 CGGAAAATAAGTACATCGAAGTCGGAGAAGGGCCTGCTGCGCTGCAAGGGAAGTTTCACACCGTCATTGAGTTC 1845
Query 925 CCACT---------GAACCCTTTGGTCCAG-ATAA--------------CTGTTTGCA-------------TTT 961
||||| ||..||| ||| |||| |.|||.||| |||
Sbjct 1846 CCACTTGAAAGAAAGAGGCCT------CAGAATAAGATGAAAAAATCTCCCGTTGGCAGCTGGCGTTCCTTTTT 1913
Query 962 CAATA--------------------------------------------------------------------- 966
||||.
Sbjct 1914 CAATTTGGGGAAGTCCTCTTCTGTCTCCAAACGCAAGTTGCAGCGTAATGAAAGTGAGCCCTCAGAAATGAAAG 1987
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1988 CCATGGCTTTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGCTCAGCTAAAAGTGAAGAGTCCCTTACTTCTCTC 2061
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2062 CATGCAGTTGACGGTGATTCCAAGTTGTTCCGACCTAGAAGACCCAGATCCAGCAGCGATGCGCTCTCTGCCTC 2135
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2136 TTTCAATGGCGACGTGCTGGGGAACCGGTGCAATTCCTATGACAATCTGCCCCACGACAACGAGAGTGAAGAGG 2209
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2210 AAGTGGGGCTGCTCCACATTCCAGCTCTTGTGTCTCCTCATTCGGCTGAGGATGTTGACTTGAGTCCACCAGAC 2283
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2284 ATCGGAGTGGCCAGTCTGGACTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAAAGCTGAGTCAGAGTGTCT 2357
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2358 GGAGAGTGGTGCTTCCTTTCTGGATTCATTAGGTTATACCAGGGATAAACTGAGTCCCAGTAAGAAGGATGCAG 2431
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2432 AAGCAGGTGGTAGCCAGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTATCTCCAGTCCAGGAGAAA 2505
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2506 CTGAGTCCGTTTTTCACCCTGGACTTGAGCCCCACTGACGACAAGTCTTCTAAGCCATCTTCATTTACAGAAAA 2579
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2580 GGTTGTTTATGCTTTCTCTCCGAAGATTGGGCGGAAGCTAAGCAAATCTCCTTCCATGAACATATCTGAGCCTA 2653
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2654 TTTCAGTGACTCTCCCACCTCGGGTATCAGAAGTCATCGGTACGGTCTCCAATACTGTAGCTCAGAATGCATCA 2727
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2728 CCTACATCTTGGGACAAAAGTGTGGAAGAAAGAGATGTCATAAATAGATCCCCCACCCAGCTGCAGCTAGGAAA 2801
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2802 GATGAAAGCAGGTGAGAGAGAGGCACAGGAGACCTGTGAACCAGAAGCACAGCCCCTGGAACAGGGGGCAGCTG 2875
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2876 AAGAAGTAGAGTTGCCAGGGACAGAGGAGCGGCCTGTCCTGAGCAGTCAGAGCAAGGCTGTACCGTCTGGACAG 2949
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2950 AGTCAGACAGGAGCAGTTACCCATGACCCCCCTCAGGATCCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCACC 3023
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3024 ACCACCGCCTCCGAAAAATGTCGCCCGAATGTTGGCACTAGCGTTAGCTGAGTCTGCACAGCAAGCCTCAAGTC 3097
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3098 AGACACTGAAGAGACCAGGGGCTTCCCAGGCTGGGTGCACTAGTTATGGAGACACGGCAGTCGTTCCATCTGAA 3171
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3172 GAGAAGCTGCCTAGTTCCTACTCTAGCCTTACTCTAGATAAAACCTGTTTCCAAACGGACCGGCCAGCAGAGCA 3245
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3246 GTTCCACCCGCAGATCAATGGACTCGGAAACTGTAACCAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGTCCCA 3319
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3320 CCCAGTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGGGAATTCGCTACATCGAAAC 3393
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3394 CATATATCTGGGGATCCAGAAAAGGCTAGAAGCACTTCAGCTCCCTTAACAGACTCAGAGAAGTCTGATGATCA 3467
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3468 TGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAGCGTGTCCACTGTCTCCTTTTTGGAGCAGGACCAGTCTC 3541
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3542 CACTCCATTTCTCCTGTGGAGATCAGCCCCTCTCTTACCTTGGTACCAGTGTGGATAAACCCCACCATTCCTCA 3615
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3616 GAACTTACAGACAAATCTCCCATGCCTTCTACTTTGCCTAGGGACAAAGCCCACCACCCTCTCTCTGGGTCCCC 3689
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3690 TGAAGAGAATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCG 3763
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3764 AGGCCAGCAGGGTCCTGGCTGAGCAGCCCTCGGCTGCTGATTTTGTGGCTGCCACCCTTCAGCGCACGCACAGA 3837
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3838 ACTAATCGGCCCCTCCCTCCACCTCCTTCCCAGAGGCCTGCAGAGCAGCCACCAGTTGTGGGGCAGGTACAAGA 3911
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3912 AGCACCAAGTATAGGATTAAATAATTCCCACAAGGTCCAGGGAACGGCTCCAGCTCCCGAGAGGCCACCTGAGT 3985
Query 967 -------------------------------------------------------------------------- 966
Sbjct 3986 CTCGGGCCATGGGTGACCCCGCACCCATCTTCCTCAGTGATGGCACTGCTGCTGCCCAGTGTCCCATGGGCGCC 4059
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4060 TCTGCTCCTCAGCCTGGACTGCCTGAGAAGGTTCGGGAAAGCAGCAGGGCTCCACCACTCCACTTACGTGCTGA 4133
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4134 GTCTTTTCCTGGCCATTCCTGTGGCTTTGCTGCCCCAGTTCCCCCAACACGGACAATGGAGAGCAAGATGGCTG 4207
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4208 CTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAGCCTCA 4281
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4282 GTGGATGATGTGATGCCCGTGCCACTCCCCGTCTCACAGCCTAAGCATGCTTCTCAGAAGATAGCCTATTCCTC 4355
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4356 CTTTGCTAGGCCTGATGTCACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAATATGACTCCAAACT 4429
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4430 GCCAGTTTCGCCCCCAGAGTGTTCCTCCACACCACAATAAGTTGGAGCCACATCAGGTATATGGTGCCCGGTCA 4503
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4504 GAGCCACCAGCCTCCATGGGTCCTCGTTATAACACCTATGTGGCGCCGGGAAGAAACATGTCTGGACACCACTC 4577
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4578 CAAGCCGTGTAGTCGGGTTGAGTATGTCTCTTCTCTGGGCTCCTCGGTTAGGAATCCTTGTTGCCCTGAAGACA 4651
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4652 TTCTACCTTACCCTACCATCCGGAGGGTACAGTCCCTCCATGCACCCCCACCTTCCATGATCCGCTCTGTTCCC 4725
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4726 ATTTCACGGACAGAAGTTCCCCCAGATGATGAACCAGCCTACTGCCCAAGACCAGTCTACCAGTATAAGCCATA 4799
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4800 CCAGTCCTCCCAGGCCCGCTCAGACTATCACGTAACTCAGCTTCAGCCTTACTTTGAGAATGGACGGGTCCATT 4873
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4874 ATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTCCTGAGGGGGCCTTGTGTGATGTCGATGCC 4947
Query 967 -------------------------------------------------------------------------- 966
Sbjct 4948 TATGGCACAGTCCAGCTGCGGCCCCTCCACCGCCTGTCCAGTCGGGACTTTGCTTTCTACAATCCAAGGCTACA 5021
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5022 AGGAAAGAACGTGTACAACTATGCTGGTTTGCCTCCACGCCCACGGGCCAATGCAACTGGCTATTTCTCTGGTA 5095
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5096 ATGACCATAATGTAGTCACTATGCCCCCCACTGCTGACGGAAAGCACACCTACACCTCATGGGACCTTGAGGAC 5169
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5170 ATGGAAAAATACCGCATGCAGTCCATCCGCCGAGAGAGCCGAGCACGGCAGAAGGTAAAAGGGCCTATCATGTC 5243
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5244 GCAGTATGACAACATGACACCAGCTGTGCAAGAAGACTTGGGAGGGATCTATGTCATCCATCTGCGCAGCAAAT 5317
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5318 CAGATCCTGGGAAAACTGGACTTCTCTCTGTGGCAGAGGGGAAAGAGGGACGGCACCCAGCCAAGGCTGTCAGT 5391
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5392 CCTGAGGGGGACGAGCGTTTCTACAGGAAGCACCCAGAGTCCGAATTTGACAGAGCCCACCATCATGGAGGGTA 5465
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5466 TGGCAGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAGCAAAGCAGCCTTAGGAACAGAAAGCTTCACGATA 5539
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5540 TGGGTTGTAGCCTCCCAGAGCACAGGGCGCATCAGGAAGCAAGCCATAGGCAATTATGTGAATCAAAAAATGGA 5613
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5614 CCACCTTATCCCCAGGGAGCTGGCCAGTTAGATTATGGGTCCAAAGGGATGCCAGACACTTCTGAGCCAAGCAA 5687
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5688 CTACCATAACTCTGGGAAATATATGACATCAGGGCAGGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCTTC 5761
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5762 CCAAAGATCTGGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGAAACACTCCAGAGACTGCTACAAGGAG 5835
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5836 GAGGAACACTTCTCTCAGTCTATGGTCCCACCCCCCAAACCAGAGAGGAGTCACAGCCTAAAACTTCACCATAC 5909
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5910 CCAGAACCTGGAGAGGGACCCCAGCGTGCTATACCAGTATCAGACACACAGCAAGCGCCAGAGCAGCATGACTG 5983
Query 967 -------------------------------------------------------------------------- 966
Sbjct 5984 TTGTGTCCCAGTATGATAACCTGGAGGATTACCACTCCCTGCCCCAGCACCAGCGAGGAGGCTTTGGAGGGGCG 6057
Query 967 -------------------------------------------------------------------------- 966
Sbjct 6058 GGCATGGGGGCCTATGTGCCCTCTGGCTTTGTCCATCCACAGAGCAGGACATACGCCACAGCATTGGGTCAGGG 6131
Query 967 ---------------------------------------------------------- 966
Sbjct 6132 GGCCTTCCTGCCCACAGAGTTGTCCTTGCCACATCCCGACACGCAGATCCATGCAGAA 6189
