Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14042
- Subject:
- NM_001297645.1
- Aligned Length:
- 1238
- Identities:
- 747
- Gaps:
- 461
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCAACATCTACATCCAGGAGCCTCCCACGAATGGGAAGGTTTTATTGAAAACTACAGCTGGAGATATTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATAGAGTTGTGGTCCAAAGAAGCTCCTAAAGCTTGCAGAAATTTTATCCAACTTTGTTTGGAAGCTTATTATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAATACCATTTTTCATAGAGTTGTGCCTGGTTTCATAGTCCAAGGCGGAGATCCTACTGGCACAGGGAGTGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGAGTCTATCTATGGAGCGCCATTCAAAGATGAATTTCATTCACGGTTGCGTTTTAATCGGAGAGGACTGGT 296
Query 1 ----ATGGC-AATGCTGGTTCTCATGATAATGGCAGCCAGTTTTTCTTCACACTGGGTCGAGCAGATGAACTTA 69
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCCATGGCAAATGCTGGTTCTCATGATAATGGCAGCCAGTTTTTCTTCACACTGGGTCGAGCAGATGAACTTA 370
Query 70 ACAATAAGCATACCATCTTTGGAAAGGTTACAGGGGATACAGTATATAACATGTTGCGACTGTCAGAAGTAGAC 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAATAAGCATACCATCTTTGGAAAGGTTACAGGGGATACAGTATATAACATGTTGCGACTGTCAGAAGTAGAC 444
Query 144 ATTGATGATGACGAAAGACCACATAATCCACACAAAATAAAAAGCTGTGAGGTTTTGTTTAATCCTTTTGATGA 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTGATGATGACGAAAGACCACATAATCCACACAAAATAAAAAGCTGTGAGGTTTTGTTTAATCCTTTTGATGA 518
Query 218 CATCATTCCAAGGGAAATTAAAAGGCTGAAAAAAGAGAAACCAGAGGAGGAAGTAAAGAAATTGAAACCCAAAG 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATCATTCCAAGGGAAATTAAAAGGCTGAAAAAAGAGAAACCAGAGGAGGAAGTAAAGAAATTGAAACCCAAAG 592
Query 292 GCACAAAAAATTTTAGTTTACTTTCATTTGGAGAGGAAGCTGAGGAAGAAGAGGAGGAAGTAAATCGAGTTAGT 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCACAAAAAATTTTAGTTTACTTTCATTTGGAGAGGAAGCTGAGGAAGAAGAGGAGGAAGTAAATCGAGTTAGT 666
Query 366 CAGAGCATGAAGGGCAAAAGCAAAAGTAGTCATGACTTGCTTAAGGATGATCCACATCTCAGTTCTGTTCCAGT 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGAGCATGAAGGGCAAAAGCAAAAGTAGTCATGACTTGCTTAAGGATGATCCACATCTCAGTTCTGTTCCAGT 740
Query 440 TGTAGAAAGTGAAAAAGGTGATGCACCAGATTTAGTTGATGATGGAGAAGATGAAAGTGCAGAGCATGATGAAT 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTAGAAAGTGAAAAAGGTGATGCACCAGATTTAGTTGATGATGGAGAAGATGAAAGTGCAGAGCATGATGAAT 814
Query 514 ATATTGATGGTGATGAAAAGAACCTGATGAGAGAAAGAATTGCCAAAAAATTAAAAAAGGACACAAGTGCGAAT 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATATTGATGGTGATGAAAAGAACCTGATGAGAGAAAGAATTGCCAAAAAATTAAAAAAGGACACAAGTGCGAAT 888
Query 588 GTTAAATCAGCTGGAGAAGGAGAAGTGGAGAAGAAATCAGTCAGCCGCAG-------------TGAAGAGCTCA 648
|||||||||||||||||||||||||||||||||||||||||||||||||| || .||
Sbjct 889 GTTAAATCAGCTGGAGAAGGAGAAGTGGAGAAGAAATCAGTCAGCCGCAGCCCACCTTCTCTATG----CCT-- 956
Query 649 GAAAAGAAGCAAGACAATTAAAACGGGA-AC-TCTTAGCAGCAAAACAAAAAAAAGTAGAAAATGCA-GCA-AA 718
|.|.|..||| .||.||| || .||.|||||.|..||| || ||| |.
Sbjct 957 -----GTATCTTGAC------TACTGGATACAGCTCAGCAGAATCACA-----------------CAGGCATAT 1002
Query 719 ACAAGCAGAAAAAAGAAGTGAAGA-GGA-----AGAAGCC--CCTCCAGATG--------GTGCT--------- 767
||||||.|..| |.|..| ||| |||..|| ||| |||.|| |||||
Sbjct 1003 ACAAGCTGGTA-------TTATTATGGATTTCTAGATTCCAGCCT-CAGCTGTGTCTCCAGTGCTTCCTTATTA 1068
Query 768 ----GTTGCCGAATACAGAAGAGAAAAGCAAAAGTATGAAGCTTTGAGGAAGCAACAGTCAAAGAAGGGAACTT 837
.|.||| ||| ||| ||| || .||| .||||
Sbjct 1069 CTCACTCGCC----ACA------------------ATG----TTT---------AC-TTCA--------CACTT 1098
Query 838 CCCGGGAAGATCA------GGATGTCACATG--TACTTCAGTT----------- 872
| ||..||| ||| ||||.|| |.||| |||
Sbjct 1099 C-----AAACTCACTCAACGGA--TCACCTGGCTGCTT--GTTTTTTTATGAAA 1143
