Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14053
- Subject:
- XM_011513939.3
- Aligned Length:
- 3315
- Identities:
- 700
- Gaps:
- 2577
Alignment
Query 1 ---------ATGCCCACCAACTTCACCGTG---GTGCCCG------------------TGGAGGCTCACGCCGA 44
|.||||..|..|||| ||.|| |||.||| |||||.|||
Sbjct 1 ATGCTGTCCAGGCCCTGCCTCTTC-CCCTGTTTGTGGCCGCTGACTCCCCAAGGGTCCTGGAGCCTC------- 66
Query 45 CGGCGGCGGGGACGAGACTGCCGAGCGGACGGAGGCTCCGGGCA--CCCCCG--AGGGCCCCGAGCCCGAGCGC 114
.||.||.||.|||||.| ||||| |||.|| ||||.||
Sbjct 67 --------TGGCCGGGAGTGCCGGG--------------GGGCAGGCCCACGGCAGGGTCC------------- 105
Query 115 CCCAGCC-----CGGGAGATGGAAATCCAAGAGAAAACAGCCCATTCCTCAACAATGTCGAGGTGGAACAAGAG 183
|| |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 -----CCTTTGGCTGGAGATGGAAATCCAAGAGAAAACAGCCCATTCCTCAACAATGTCGAGGTGGAACAAGAG 174
Query 184 AGCTTCTTTGAAGGGAAGAACATGGCACTTTTCGAGGAGGAGATGGACAGTAACCCCATGGTGTCCTCGCTGCT 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 175 AGCTTCTTTGAAGGGAAGAACATGGCACTTTTCGAGGAGGAGATGGACAGTAACCCCATGGTGTCCTCGCTGCT 248
Query 258 CAACAAGCTGGCCAACTACACCAACCTGAGCCAGGGCGTGGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGC 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 CAACAAGCTGGCCAACTACACCAACCTGAGCCAGGGCGTGGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGC 322
Query 332 GGGAGGCCAAGGCTCCGCGCATGGGCACCTTCATCGGCGTCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTC 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 323 GGGAGGCCAAGGCTCCGCGCATGGGCACCTTCATCGGCGTCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTC 396
Query 406 ATCCTCTTCCTGCGCCTGACGTGGATCGTGGGGGTGGCTGGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 397 ATCCTCTTCCTGCGCCTGACGTGGATCGTGGGGGTGGCTGGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTG 470
Query 480 CTGCACATGTACAATGCTGACCGCCATTTCCATGAGTGCGATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGT 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 471 CTGCACATGTACAATGCTGACCGCCATTTCCATGAGTGCGATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGT 544
Query 554 CCTACTACATGATATCGCGCTCGCTGGGACCCGAGTTTGGAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 CCTACTACATGATATCGCGCTCGCTGGGACCCGAGTTTGGAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACG 618
Query 628 ACGTTTGCAGGGGCCATGTATATTTTGGGGACCATCGAGATTTTTCTGA------------------------- 676
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 ACGTTTGCAGGGGCCATGTATATTTTGGGGACCATCGAGATTTTTCTGACGTACATCTCCCCGGGTGCGGCCAT 692
Query 677 ----CAGGCACGGAGGACGGC--GTGGGCAGCCTGGGCCTGGGCTTG--GCCCAGGGAAACA--------GACG 734
|||| |||||| |.|| ||||..||.| |||| |.|.|| ||.| |||| .|||
Sbjct 693 CTTCCAGG--CGGAGG-CTGCAGGTGGCGAGGC--GGCC--GCCATGCTGCAC-----AACATGCGTGTGTACG 754
Query 735 GCA----GACACACCTG-TC----CCCCAGTGAT-------GCCGCC-----------CAAGCTGCCCATGG-- 779
||| .||.|.|.|| || |||..|||.| |.||.| |||||||.|..|||
Sbjct 755 GCACGTGCACGCTCGTGCTCATGGCCCTGGTGGTCTTCGTGGGCGTCAAGTATGTCAACAAGCTGGCGCTGGTC 828
Query 780 -----------------------------GGCTTTCTA---CGG-------AAGT-----TTC----------- 798
|||..|||| ||| |||| |||
Sbjct 829 TTCCTGGCCTGCGTCGTGCTGTCCATCCTGGCCATCTATGCCGGCGTCATCAAGTCTGCCTTCGACCCCCCGGA 902
Query 799 -------------------------------------------------------------------------- 798
Sbjct 903 CATCCCGGTCTGCCTCCTGGGGAACCGCACGCTGTCACGGCGCAGCTTCGATGCCTGCGTCAAGGCCTACGGCA 976
Query 799 -------------------------------------------------------------------------- 798
Sbjct 977 TCCACAACAACTCAGCCACCTCCGCGCTCTGGGGCCTCTTCTGCAACGGCTCCCAGCCCAGCGCCGCCTGTGAC 1050
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1051 GAGTACTTCATCCAGAACAACGTCACCGAAATCCAGGGCATCCCGGGCGCGGCCAGTGGTGTCTTCCTGGAGAA 1124
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1125 CCTGTGGAGTACGTACGCGCACGCGGGGGCGTTTGTGGAGAAGAAAGGTGTGCCCTCGGTGCCCGTGGCAGAGG 1198
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1199 AGAGCCGTGCCAGCGCACTGCCCTACGTGCTCACCGACATCGCGGCCTCCTTCACCCTGCTGGTTGGCATCTAC 1272
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1273 TTCCCTTCCGTGACCGGTATCATGGCGGGTTCAAACCGGTCCGGGGACCTCAAGGATGCACAGAAGTCCATCCC 1346
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1347 CACGGGGACCATCCTGGCCATAGTGACGACGTCTTTCATCTATCTCTCCTGCATTGTGCTGTTTGGGGCCTGCA 1420
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1421 TTGAAGGCGTGGTCTTACGAGATAAGTTCGGGGAGGCCCTGCAGGGGAACCTGGTCATCGGCATGCTGGCCTGG 1494
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1495 CCCTCCCCCTGGGTCATCGTCATCGGCTCCTTCTTCTCCACCTGCGGTGCCGGCCTGCAGAGCCTCACGGGGGC 1568
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1569 ACCGCGCCTACTGCAGGCCATTGCCCGTGACGGCATCGTCCCCTTCCTGCAGGTGTTTGGCCACGGGAAGGCCA 1642
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1643 ACGGGGAGCCCACGTGGGCGCTGCTGCTGACAGTCCTCATCTGCGAGACTGGCATCCTCATCGCCTCTCTGGAC 1716
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1717 AGCGTGGCCCCGATCCTCTCCATGTTCTTCCTCATGTGCTACCTGTTCGTGAACCTGGCCTGCGCCGTGCAGAC 1790
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1791 CCTGCTACGTACCCCCAACTGGCGTCCACGCTTCAAGTTCTACCACTGGACCCTGTCCTTTCTGGGTATGAGCC 1864
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1865 TGTGCCTGGCGCTGATGTTCATCTGCTCCTGGTACTACGCGCTGTCCGCCATGCTCATCGCTGGCTGCATCTAC 1938
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1939 AAGTACATCGAGTACCGCGGGGCCGAGAAGGAGTGGGGCGATGGCATCCGTGGCCTATCCCTGAACGCCGCCCG 2012
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2013 CTACGCCCTGCTGCGCGTGGAGCACGGTCCCCCCCACACCAAGAACTGGAGGCCCCAGGTGCTGGTGATGCTGA 2086
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2087 ACCTGGACGCGGAGCAGGCCGTGAAGCACCCCCGCCTGCTGTCCTTCACGTCGCAGCTGAAGGCCGGCAAGGGC 2160
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2161 CTGACCATCGTGGGCTCGGTGCTGGAGGGGACGTACCTGGACAAGCACATGGAGGCTCAGCGGGCCGAGGAGAA 2234
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2235 CATACGGTCCCTAATGAGCACAGAGAAGACCAAGGGCTTCTGCCAGCTGGTGGTCTCGTCCAGCCTGCGGGATG 2308
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2309 GCATGTCCCACCTGATCCAGTCGGCCGGCCTGGGCGGCCTGAAGCACAACACGGTGCTCATGGCCTGGCCCGCA 2382
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2383 TCCTGGAAGCAGGAGGACAACCCCTTCTCCTGGAAGAACTTTGTGGACACCGTCCGCGACACCACCGCCGCGCA 2456
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2457 CCAGGCTCTGCTGGTGGCCAAGAACGTCGACTCGTTTCCGCAAAACCAGGAGCGCTTCGGCGGGGGCCACATCG 2530
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2531 ACGTGTGGTGGATCGTGCACGACGGCGGCATGCTCATGCTGCTGCCCTTCCTGCTGCGCCAGCACAAGGTGTGG 2604
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2605 AGGAAGTGCCGGATGCGTATCTTCACCGTGGCCCAGGTGGACGACAACAGCATCCAGATGAAGAAGGACCTGCA 2678
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2679 GATGTTCTTGTACCACTTGCGCATCAGCGCCGAGGTGGAGGTGGTGGAGATGGTTGAAAACGACATATCTGCTT 2752
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2753 TCACCTACGAGAGGACACTAATGATGGAGCAGAGGTCGCAGATGCTGAAGCAGATGCAGCTGTCCAAGAACGAG 2826
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2827 CAGGAGCGAGAGGCCCAGCTGATCCACGACAGGAACACCGCGTCCCACACCGCGGCGGCAGCCAGGACCCAAGC 2900
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2901 GCCGCCTACGCCAGACAAGGTGCAGATGACCTGGACCAGGGAGAAGCTGATCGCTGAGAAGTACAGGAGCAGAG 2974
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2975 ACACCAGCCTATCTGGTTTCAAAGACCTCTTCAGCATGAAGCCAGAATGGGGAAACCTGGACCAGTCCAACGTC 3048
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3049 AGGCGGATGCACACGGCTGTGAAGCTCAATGGCGTCGTCCTCAACAAGTCCCAGGATGCGCAGCTGGTCCTGCT 3122
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3123 CAACATGCCAGGTCCTCCCAAAAACCGGCAGGGAGACGAGAACTACATGGAGTTTCTTGAAGTCCTGACCGAGG 3196
Query 799 ----------------------------------------------------------- 798
Sbjct 3197 GGCTGAACAGAGTCCTCCTGGTCAGGGGTGGCGGCCGGGAGGTGATCACCATCTACTCC 3255
