Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14053
Subject:
XM_011513940.2
Aligned Length:
3296
Identities:
692
Gaps:
2572

Alignment

Query    1  ATGCCCACCAACTTCACCGTGGTGCCCGTGGA-GGCTCACGCCGACGGC-----GGCGGGGACGAGACTGCCGA  68
                                           | ||||||    ||||.|     ||           ||||.||
Sbjct    1  -------------------------------ATGGCTCA----GACGTCACTCTGG-----------CTGCTGA  28

Query   69  GCGGACGGAGGCTCCGGGCACCCCCGAGG-----------GCCCCGAGCCCGAGCGCCCCAGCCCGG---GAGA  128
            | ||| |||||||    |.|||    |||           |||.||.|.|.|||      .|..|||   ||||
Sbjct   29  G-GGA-GGAGGCT----GGACC----AGGACCAGCAAACAGCCACGTGACAGAG------GGTTCGGGAAGAGA  86

Query  129  TGGAAATCCAAGAGAAAACAGCCCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGA  202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   87  TGGAAATCCAAGAGAAAACAGCCCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGA  160

Query  203  ACATGGCACTTTTCGAGGAGGAGATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTAC  276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  161  ACATGGCACTTTTCGAGGAGGAGATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTAC  234

Query  277  ACCAACCTGAGCCAGGGCGTGGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCG  350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  235  ACCAACCTGAGCCAGGGCGTGGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCG  308

Query  351  CATGGGCACCTTCATCGGCGTCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGA  424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  309  CATGGGCACCTTCATCGGCGTCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGA  382

Query  425  CGTGGATCGTGGGGGTGGCTGGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTG  498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  383  CGTGGATCGTGGGGGTGGCTGGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTG  456

Query  499  ACCGCCATTTCCATGAGTGCGATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCG  572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  457  ACCGCCATTTCCATGAGTGCGATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCG  530

Query  573  CTCGCTGGGACCCGAGTTTGGAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGT  646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  531  CTCGCTGGGACCCGAGTTTGGAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGT  604

Query  647  ATATTTTGGGGACCATCGAGATTTTTCTGA-----------------------------CAGGCACGGAGGACG  691
            ||||||||||||||||||||||||||||||                             ||||  |||||| |.
Sbjct  605  ATATTTTGGGGACCATCGAGATTTTTCTGACGTACATCTCCCCGGGTGCGGCCATCTTCCAGG--CGGAGG-CT  675

Query  692  GC--GTGGGCAGCCTGGGCCTGGGCTTG--GCCCAGGGAAACA--------GACGGCA----GACACACCTG-T  748
            ||  ||||..||.|  ||||  |.|.||  ||.|     ||||        .||||||    .||.|.|.|| |
Sbjct  676  GCAGGTGGCGAGGC--GGCC--GCCATGCTGCAC-----AACATGCGTGTGTACGGCACGTGCACGCTCGTGCT  740

Query  749  C----CCCCAGTGAT-------GCCGCC-----------CAAGCTGCCCATGG---------------------  779
            |    |||..|||.|       |.||.|           |||||||.|..|||                     
Sbjct  741  CATGGCCCTGGTGGTCTTCGTGGGCGTCAAGTATGTCAACAAGCTGGCGCTGGTCTTCCTGGCCTGCGTCGTGC  814

Query  780  ----------GGCTTTCTA---CGG-------AAGT-----TTC------------------------------  798
                      |||..||||   |||       ||||     |||                              
Sbjct  815  TGTCCATCCTGGCCATCTATGCCGGCGTCATCAAGTCTGCCTTCGACCCCCCGGACATCCCGGTCTGCCTCCTG  888

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct  889  GGGAACCGCACGCTGTCACGGCGCAGCTTCGATGCCTGCGTCAAGGCCTACGGCATCCACAACAACTCAGCCAC  962

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct  963  CTCCGCGCTCTGGGGCCTCTTCTGCAACGGCTCCCAGCCCAGCGCCGCCTGTGACGAGTACTTCATCCAGAACA  1036

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1037  ACGTCACCGAAATCCAGGGCATCCCGGGCGCGGCCAGTGGTGTCTTCCTGGAGAACCTGTGGAGTACGTACGCG  1110

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1111  CACGCGGGGGCGTTTGTGGAGAAGAAAGGTGTGCCCTCGGTGCCCGTGGCAGAGGAGAGCCGTGCCAGCGCACT  1184

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1185  GCCCTACGTGCTCACCGACATCGCGGCCTCCTTCACCCTGCTGGTTGGCATCTACTTCCCTTCCGTGACCGGTA  1258

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1259  TCATGGCGGGTTCAAACCGGTCCGGGGACCTCAAGGATGCACAGAAGTCCATCCCCACGGGGACCATCCTGGCC  1332

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1333  ATAGTGACGACGTCTTTCATCTATCTCTCCTGCATTGTGCTGTTTGGGGCCTGCATTGAAGGCGTGGTCTTACG  1406

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1407  AGATAAGTTCGGGGAGGCCCTGCAGGGGAACCTGGTCATCGGCATGCTGGCCTGGCCCTCCCCCTGGGTCATCG  1480

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1481  TCATCGGCTCCTTCTTCTCCACCTGCGGTGCCGGCCTGCAGAGCCTCACGGGGGCACCGCGCCTACTGCAGGCC  1554

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1555  ATTGCCCGTGACGGCATCGTCCCCTTCCTGCAGGTGTTTGGCCACGGGAAGGCCAACGGGGAGCCCACGTGGGC  1628

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1629  GCTGCTGCTGACAGTCCTCATCTGCGAGACTGGCATCCTCATCGCCTCTCTGGACAGCGTGGCCCCGATCCTCT  1702

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1703  CCATGTTCTTCCTCATGTGCTACCTGTTCGTGAACCTGGCCTGCGCCGTGCAGACCCTGCTACGTACCCCCAAC  1776

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1777  TGGCGTCCACGCTTCAAGTTCTACCACTGGACCCTGTCCTTTCTGGGTATGAGCCTGTGCCTGGCGCTGATGTT  1850

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1851  CATCTGCTCCTGGTACTACGCGCTGTCCGCCATGCTCATCGCTGGCTGCATCTACAAGTACATCGAGTACCGCG  1924

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1925  GGGCCGAGAAGGAGTGGGGCGATGGCATCCGTGGCCTATCCCTGAACGCCGCCCGCTACGCCCTGCTGCGCGTG  1998

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 1999  GAGCACGGTCCCCCCCACACCAAGAACTGGAGGCCCCAGGTGCTGGTGATGCTGAACCTGGACGCGGAGCAGGC  2072

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2073  CGTGAAGCACCCCCGCCTGCTGTCCTTCACGTCGCAGCTGAAGGCCGGCAAGGGCCTGACCATCGTGGGCTCGG  2146

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2147  TGCTGGAGGGGACGTACCTGGACAAGCACATGGAGGCTCAGCGGGCCGAGGAGAACATACGGTCCCTAATGAGC  2220

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2221  ACAGAGAAGACCAAGGGCTTCTGCCAGCTGGTGGTCTCGTCCAGCCTGCGGGATGGCATGTCCCACCTGATCCA  2294

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2295  GTCGGCCGGCCTGGGCGGCCTGAAGCACAACACGGTGCTCATGGCCTGGCCCGCATCCTGGAAGCAGGAGGACA  2368

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2369  ACCCCTTCTCCTGGAAGAACTTTGTGGACACCGTCCGCGACACCACCGCCGCGCACCAGGCTCTGCTGGTGGCC  2442

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2443  AAGAACGTCGACTCGTTTCCGCAAAACCAGGAGCGCTTCGGCGGGGGCCACATCGACGTGTGGTGGATCGTGCA  2516

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2517  CGACGGCGGCATGCTCATGCTGCTGCCCTTCCTGCTGCGCCAGCACAAGGTGTGGAGGAAGTGCCGGATGCGTA  2590

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2591  TCTTCACCGTGGCCCAGGTGGACGACAACAGCATCCAGATGAAGAAGGACCTGCAGATGTTCTTGTACCACTTG  2664

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2665  CGCATCAGCGCCGAGGTGGAGGTGGTGGAGATGGTTGAAAACGACATATCTGCTTTCACCTACGAGAGGACACT  2738

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2739  AATGATGGAGCAGAGGTCGCAGATGCTGAAGCAGATGCAGCTGTCCAAGAACGAGCAGGAGCGAGAGGCCCAGC  2812

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2813  TGATCCACGACAGGAACACCGCGTCCCACACCGCGGCGGCAGCCAGGACCCAAGCGCCGCCTACGCCAGACAAG  2886

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2887  GTGCAGATGACCTGGACCAGGGAGAAGCTGATCGCTGAGAAGTACAGGAGCAGAGACACCAGCCTATCTGGTTT  2960

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 2961  CAAAGACCTCTTCAGCATGAAGCCAGAATGGGGAAACCTGGACCAGTCCAACGTCAGGCGGATGCACACGGCTG  3034

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 3035  TGAAGCTCAATGGCGTCGTCCTCAACAAGTCCCAGGATGCGCAGCTGGTCCTGCTCAACATGCCAGGTCCTCCC  3108

Query  799  --------------------------------------------------------------------------  798
                                                                                      
Sbjct 3109  AAAAACCGGCAGGGAGACGAGAACTACATGGAGTTTCTTGAAGTCCTGACCGAGGGGCTGAACAGAGTCCTCCT  3182

Query  799  ----------------------------------------  798
                                                    
Sbjct 3183  GGTCAGGGGTGGCGGCCGGGAGGTGATCACCATCTACTCC  3222

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