Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14053
- Subject:
- XR_925582.2
- Aligned Length:
- 5482
- Identities:
- 764
- Gaps:
- 4696
Alignment
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 1 AGTCCCGTGGCGTCGGCGGGAGCGGCGCAGCGCGGGCCGGGCCGGGACGGGGACTGTCGGCTGCAGGCGGCCAT 74
Query 3 GCCCACCAACTTCACCGTGGTGCCCGTGGAGGCTCACGCCGACGGCGGCGGGGACGAGACTGCCGAGCGGACGG 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCCACCAACTTCACCGTGGTGCCCGTGGAGGCTCACGCCGACGGCGGCGGGGACGAGACTGCCGAGCGGACGG 148
Query 77 AGGCTCCGGGCACCCCCGAGGGCCCCGAGCCCGAGCGCCCCAGCCCGGGAGATGGAAATCCAAGAGAAAACAGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGCTCCGGGCACCCCCGAGGGCCCCGAGCCCGAGCGCCCCAGCCCGGGAGATGGAAATCCAAGAGAAAACAGC 222
Query 151 CCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGAACATGGCACTTTTCGAGGAGGA 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGAACATGGCACTTTTCGAGGAGGA 296
Query 225 GATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTACACCAACCTGAGCCAGGGCGTGG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTACACCAACCTGAGCCAGGGCGTGG 370
Query 299 TGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCGCATGGGCACCTTCATCGGCGTC 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCGCATGGGCACCTTCATCGGCGTC 444
Query 373 TACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGACGTGGATCGTGGGGGTGGCTGG 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGACGTGGATCGTGGGGGTGGCTGG 518
Query 447 TGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTGACCGCCATTTCCATGAGTGCGA 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTGACCGCCATTTCCATGAGTGCGA 592
Query 521 TCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCGCTCGCTGGGACCCGAGTTTGGA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCGCTCGCTGGGACCCGAGTTTGGA 666
Query 595 GGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGTATATTTTGGGGACCATCGAGAT 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGTATATTTTGGGGACCATCGAGAT 740
Query 669 TTTTCTGA-----------------------------CAGGCACGGAGGACGGC--GTGGGCAGCCTGGGCCTG 711
|||||||| |||| |||||| |.|| ||||..||.| ||||
Sbjct 741 TTTTCTGACGTACATCTCCCCGGGTGCGGCCATCTTCCAGG--CGGAGG-CTGCAGGTGGCGAGGC--GGCC-- 807
Query 712 GGCTTG--GCCCAGGGAAACA--------GACGGCA----GACACACCTG-TC----CCCCAGTGAT------- 759
|.|.|| ||.| |||| .|||||| .||.|.|.|| || |||..|||.|
Sbjct 808 GCCATGCTGCAC-----AACATGCGTGTGTACGGCACGTGCACGCTCGTGCTCATGGCCCTGGTGGTCTTCGTG 876
Query 760 GCCGCC-----------CAAGCTGCCCATGG-------------------------------GGCTTTCTA--- 788
|.||.| |||||||.|..||| |||..||||
Sbjct 877 GGCGTCAAGTATGTCAACAAGCTGGCGCTGGTCTTCCTGGCCTGCGTCGTGCTGTCCATCCTGGCCATCTATGC 950
Query 789 CGG-------AAGT-----TTC---------------------------------------------------- 798
||| |||| |||
Sbjct 951 CGGCGTCATCAAGTCTGCCTTCGACCCCCCGGACATCCCGGTCTGCCTCCTGGGGAACCGCACGCTGTCACGGC 1024
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1025 GCAGCTTCGATGCCTGCGTCAAGGCCTACGGCATCCACAACAACTCAGCCACCTCCGCGCTCTGGGGCCTCTTC 1098
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1099 TGCAACGGCTCCCAGCCCAGCGCCGCCTGTGACGAGTACTTCATCCAGAACAACGTCACCGAAATCCAGGGCAT 1172
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1173 CCCGGGCGCGGCCAGTGGTGTCTTCCTGGAGAACCTGTGGAGTACGTACGCGCACGCGGGGGCGTTTGTGGAGA 1246
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1247 AGAAAGGTGTGCCCTCGGTGCCCGTGGCAGAGGAGAGCCGTGCCAGCGCACTGCCCTACGTGCTCACCGACATC 1320
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1321 GCGGCCTCCTTCACCCTGCTGGTTGGCATCTACTTCCCTTCCGTGACCGGTATCATGGCGGGTTCAAACCGGTC 1394
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1395 CGGGGACCTCAAGGATGCACAGAAGTCCATCCCCACGGGGACCATCCTGGCCATAGTGACGACGTCTTTCATCT 1468
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1469 ATCTCTCCTGCATTGTGCTGTTTGGGGCCTGCATTGAAGGCGTGGTCTTACGAGATAAGTTCGGGGAGGCCCTG 1542
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1543 CAGGGGAACCTGGTCATCGGCATGCTGGCCTGGCCCTCCCCCTGGGTCATCGTCATCGGCTCCTTCTTCTCCAC 1616
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1617 CTGCGGTGCCGGCCTGCAGAGCCTCACGGGGGCACCGCGCCTACTGCAGGCCATTGCCCGTGACGGCATCGTCC 1690
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1691 CCTTCCTGCAGGTGTTTGGCCACGGGAAGGCCAACGGGGAGCCCACGTGGGCGCTGCTGCTGACAGTCCTCATC 1764
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1765 TGCGAGACTGGCATCCTCATCGCCTCTCTGGACAGCGTGGCCCCGATCCTCTCCATGTTCTTCCTCATGTGCTA 1838
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1839 CCTGTTCGTGAACCTGGCCTGCGCCGTGCAGACCCTGCTACGTACCCCCAACTGGCGTCCACGCTTCAAGTTCT 1912
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1913 ACCACTGGACCCTGTCCTTTCTGGGTATGAGCCTGTGCCTGGCGCTGATGTTCATCTGCTCCTGGTACTACGCG 1986
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1987 CTGTCCGCCATGCTCATCGCTGGCTGCATCTACAAGTACATCGAGTACCGCGGGGCCGAGAAGGAGTGGGGCGA 2060
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2061 TGGCATCCGTGGCCTATCCCTGAACGCCGCCCGCTACGCCCTGCTGCGCGTGGAGCACGGTCCCCCCCACACCA 2134
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2135 AGAACTGGAGGCCCCAGGTGCTGGTGATGCTGAACCTGGACGCGGAGCAGGCCGTGAAGCACCCCCGCCTGCTG 2208
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2209 TCCTTCACGTCGCAGCTGAAGGCCGGCAAGGGCCTGACCATCGTGGGCTCGGTGCTGGAGGGGACGTACCTGGA 2282
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2283 CAAGCACATGGAGGCTCAGCGGGCCGAGGAGAACATACGGTCCCTAATGAGCACAGAGAAGACCAAGGGCTTCT 2356
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2357 GCCAGCTGGTGGTCTCGTCCAGCCTGCGGGATGGCATGTCCCACCTGATCCAGTCGGCCGGCCTGGGCGGCCTG 2430
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2431 AAGCACAACACGGTGCTCATGGCCTGGCCCGCATCCTGGAAGCAGGAGGACAACCCCTTCTCCTGGAAGAACTT 2504
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2505 TGTGGACACCGTCCGCGACACCACCGCCGCGCACCAGGCTCTGCTGGTGGCCAAGAACGTCGACTCGTTTCCGC 2578
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2579 AAAACCAGGAGCGCTTCGGCGGGGGCCACATCGACGTGTGGTGGATCGTGCACGACGGCGGCATGCTCATGCTG 2652
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2653 CTGCCCTTCCTGCTGCGCCAGCACAAGGTGTGGAGGAAGTGCCGGATGCGTATCTTCACCGTGGCCCAGGTGGA 2726
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2727 CGACAACAGCATCCAGATGAAGAAGGACCTGCAGATGTTCTTGTACCACTTGCGCATCAGCGCCGAGGTGGAGG 2800
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2801 TGGTGGAGATGGACATCACAGAAAGCACAGAGCCCCGTGTGTTGCTTGTGGACACCTCGTGTAACACGGGTGTG 2874
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2875 GGTGTTGCCCTAGAGCCGGCATCAGCATCTCCGTGTCCTCCATGGTCCCGTGTCCTCCTCGGCCCGGGACCCCG 2948
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2949 TCCAGGACCTCACACCTCAGTGGTGTTGCCATGGTTGAAAACGACATATCTGCTTTCACCTACGAGAGGACACT 3022
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3023 AATGATGGAGCAGAGGTCGCAGATGCTGAAGCAGATGCAGCTGTCCAAGAACGAGCAGGAGCGAGAGGCCCAGC 3096
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3097 TGATCCACGACAGGAACACCGCGTCCCACACCGCGGCGGCAGCCAGGACCCAAGCGCCGCCTACGCCAGACAAG 3170
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3171 GTGCAGATGACCTGGACCAGGGAGAAGCTGATCGCTGAGAAGTACAGGAGCAGAGACACCAGCCTATCTGGTTT 3244
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3245 CAAAGACCTCTTCAGCATGAAGCCGGACCAGTCCAACGTCAGGCGGATGCACACGGCTGTGAAGCTCAATGGCG 3318
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3319 TCGTCCTCAACAAGTCCCAGGATGCGCAGCTGGTCCTGCTCAACATGCCAGGTCCTCCCAAAAACCGGCAGGGA 3392
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3393 GACGAGAACTACATGGAGTTTCTTGAAGTCCTGACCGAGGGGCTGAACAGAGTCCTCCTGGTCAGGGGTGGCGG 3466
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3467 CCGGGAGGTGATCACCATCTACTCCTAATGCCCAACAGCATCACGGCACTCTGGGACAGGCACGGAGGACGGCG 3540
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3541 TGGGCAGCCTGGGCCTGGGCTTGGCCCAGGGAAACAGACGGCAGACACACCTGTCCCCCAGTGATGCCGCCCAA 3614
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3615 GCTGCCCATGGGGCTTCCTACGGAAGTTTCTAGGCCCGTCACCTAGGGCTCTCCTGTTCAGCCTTAACAGGCTC 3688
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3689 AGCAAATCAGGGCGTGGCTGGACGATTTCCTTGCATCTGAGGGCAGACGCTGCTACCGGAGTGACCTGGACGTG 3762
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3763 GCCAGATCTTCTCGCAGGTCACAAGAAGCCAGTGAGCCCTTGCCTTGGTTTCTGGAAGTTCTTTTCCTTGGCTG 3836
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3837 GATTTACCCAGTGGTTAGGTTGCATTTCTACCCCATCCAGAACATTCTTGGAAGAGCACCCGGAGCTGAAGCTG 3910
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3911 TCCCTGATGATGAAGGTGAAACGTCAGCCCTGGCCATGGCTCCGCTCAGGGCCCCGGTCACCTCCGAGTCACTC 3984
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3985 TGTTCCTTGACTGTCTTTGTGTTTCTGTACCTCAAGGCACTGAAGCTGGAGGACTCTGTCCATGCCCGTGTCAC 4058
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4059 CCTCGTGTGGGAGCCTCTGGGCTCGGCAGGTCCACATTTCATGAGCTGAGGCGTGGGCCAGGGCCATCTGGAAA 4132
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4133 GGGAACTCGGCTTTTCCAGAACGTGGTGGATCATCTGTCGGGTGTGTGGTGAACACGTTCAGTTCATCAGGGCC 4206
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4207 TACGCTCCGGGAAGGGGCCCCCAGCTGTGGCTCTGCCATGCCGGGCTGTGTTTGCAGCTGTCCGAGTCTCCATC 4280
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4281 CACCTTTAGAAAACCAGCCACTTCTTTTCATAAGCACTGACAGGGCCCAGCCCACAGCCACAGGTGCGATCAGT 4354
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4355 GCCTCACGCAGGCAAATGCACTGAAACCCAGGGGCACACGCGCGCAGAGTGAACAGTGAGTTCCCCCGACAGCC 4428
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4429 CACGACAGCCAGGACTGCCCTCCCCACCCCACCCCACCCCAGGAGCACGGCACACAGTTCAGCCTCTGAGCTGG 4502
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4503 CTCACACGTGCCATCCCCACCCCGGTGCTCCAGGGAAGGAGGACACGGACCCGACGTGGGAGGTCCTCAGGCAG 4576
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4577 CAGTGGCGCCTGGTGTCAGGTCTGTCTGGCTGAGTCCCGGGCGTCCCCTGCCATGGCCTGTGCCTTGCATGGAG 4650
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4651 GCGGCGGTGGCACTGAAGAGATAGCTTTCAAGGGCCCAACACTTTGCACTTCGGCTGGCTGTGAGTTTCTGCTT 4724
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4725 TGTAGGTTGTGGTCACATTTGCAGGCTGCGGGCAGTGGCACCGACTTGGGCCTCCCTTTCTATGTGGCATATTT 4798
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4799 ATTTATTTAAACACCCCAGGGAGTTACGTGGTAACAAGGTTGTCCATAAAGAGGTTGCTTCTATATACTAGAGG 4872
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4873 CCCCAGATGGCCAGGCCTTGGGCTACGTCTGGCTTGCATGGTCTCCCAAGGGAATCAGCCCCATCAACAAAGTT 4946
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4947 CAAATCGGGGCAGAGGCTGCACTTGTGCCCCCAGATGTTTCTGAGGAGCCAGACTAGGGCTGGCATTGCTGTAG 5020
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5021 AGTGACGGCTGCTGCCCAGAGCGTGTCCCAGACATCACAGCGGGGCTCAGCAGTTCCCACAGCCTCTGCCTGCC 5094
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5095 TTGGCTAAGCATGAGTTAAGCAGCAAAACGCTCCTCCATGTCTGGATGGGGCCGGCAGGTCCTGTGTCCCCTGC 5168
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5169 ACCTGGAGGAGAGCAGGCTAGAGGCACAGCGGCCACATGGTGCTGGCTCTGAACGTTGGTTGGTGGCTGGAAAA 5242
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5243 CAGCCCTGCTTCTGAGGGCCGCTCAGTTCTGCACACGAAACCACCTCCTGAGGGCTCAGCTCTGCCCCCGCCCT 5316
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5317 GGGCTGCAGCCTCTGCACGCAAGCACCAGGCATCCTTTGTGTTGTCAACTCCGTGTAACCAGTAACTACAGCCA 5390
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5391 TTTACAATTGACTCCGTTTCCTTTTGTAGGTTTCCCTGTCTGTCTGTGTTAGTAGAAAAATAAAATCCTATGAA 5464
Query 799 ------ 798
Sbjct 5465 ATCTGA 5470