Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14147
Subject:
XR_001756216.2
Aligned Length:
2626
Identities:
220
Gaps:
2395

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTACTCTTCTTTGCATTGGCCAGATATGTCGTCACTCACAAAACTTCGAGCTCATTGGTGCAAAAGCTCCAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCGGTGGGTGATTGGTTGGTTGCTGTTCCTGCCCCCACGCCTGTCGTGGTTTAGCTGAACTGAGCTGAAATCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAAAGGCCGCGGAGTCGGCGGTGTTGTAGGTAGCGGTACCTTGAGTGGCAACAGAATTCGATTAAATTACAATG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAAACATTTTTGAAAAGCTCTTTAAAAGTCTACTTGGGAAAAAAAAGATGCGGATTCTTATATTGAGTTTGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAGGTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGGTGTCTGGGATGTTGGCAGCCACTTCAAAATCAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTCTGTGGCAGCATTTTTTCCAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGC  518

Query    1  -------------------------------------------ATGTGGACAGGAGGTAGAAGTCATCCTTTCC  31
                                                       |||||||.|||||||||||||||||||||||
Sbjct  519  CAGCGGGGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCC  592

Query   32  TCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGG  105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGG  666

Query  106  GGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGC  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGC  740

Query  180  TGTGGTTCGTGAGCCACACATCTCCCCA-----CACCAAGCTCCTCCATACAAGACCT----CGG----ACT--  238
            |       ||||||.| .||.||.||||     |||.|      |.||| |||||..|    |||    |||  
Sbjct  741  T-------GTGAGCTA-TCAGCTTCCCAGTTTGCACAA------TTCAT-CAAGAAATTATGCGGGGTCACTGG  799

Query  239  -------------GCATCACG-----------------------------------------------------  246
                         |||||.|.                                                     
Sbjct  800  CACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAA  873

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct  874  TTACTTTGAATGCTGGTCTCGAACTCCTGGCTTGAAGTGATCCTTCTGTCTTGGCCTCCCGAAATGCTGAGATT  947

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct  948  TCAAGCGTGAGTCATCATGTCTGGTCTCACAGCTCAGTTTTTAACATATGTATGAAATATCAACTGTGTTTGGT  1021

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1022  TCAAAGGACTTTATGATCTTACAGATAGGAACTAAGGAATAATAACGTAAGAAATAAAAAATGTGGAAATAAAA  1095

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1096  ATGTTCAGTCATAACATGATTAAAAGGTAAGGCACCAGGTGGGGGGTCGAAGTAAGTTCAAATCCAAAATAGAG  1169

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1170  ACCACTGGGCTAGTAGACACTTCACATTAGAAGCATGGCTAGGTGTCTACTCCCTGAGAACCAAAATTCCACCA  1243

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1244  GATACAATGAACAAAGCTTTAGAGAGAGAAAACATTTGAACATTTTACGGGCAGAAAATGGCCCACATACTCTA  1317

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1318  TAGACAATACAATTTCCTTCAAGGCAAACTAGAACTATAAGGCTTTTGGTCTAAGAAGTGAGTGTGTGCAAGGG  1391

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1392  ATACCTTTGCATACTAGGGAGGGGTAGACAACCCACACATTTAGCTTGGTTATTAAATGTCATTACTCAGACTT  1465

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1466  GACAGTTGATGACCAAGGAAGTAAGACTTTCACTAGAAGGGCTGCCCAGGTTGGAAAGCTGAGAGCAATCAGGG  1539

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1540  CCACCTCTTACAAGCAAATAAAGGTCTGTAGTAACTTAATTACAATCTCAGTCTCTAAGCCTTCAGGGTTGTGA  1613

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1614  AGCAGAAAGGCAACTCTGTTCAGGGACTCGTTAAACACCAGGTTTCCTTTGGGCACAGGCTATGACATTTGTGC  1687

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1688  CACTGTAGAACTGAATAGGAAATACAAGCAGTGCCATTCAACAGCATGACCACTTCCAAGGCTCACAGCAAAGC  1761

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1762  AGCTGATTATTGTATAAGAATCATATTTGGCCAATATGTCAGTGCCAGAAATGAGAGCTGGAACTGAATTCTCG  1835

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1836  ATTCGAGAAACATAATCTAATAAATTCTTCAGCAGAGTTTATTTATTCAGAGAGAAAACAATCACAACAATAGC  1909

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1910  ATATTTTGTCTGCTTACCTTGTAAGTATAGTTCTGAGTTTTTACACTTGTCATCTCATTTTTTCTTACAATATC  1983

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 1984  CGCAATAAGGTTGATTGGATTACTAACCCCAGTTTGCAGATAAAGATTGCAGCTTAGAGATATTAAATATCTTC  2057

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2058  AAATCTCTCTGGCCATAAGACCTAAAACTGCATACAAAAATCTAAGAGACAGAGTTAGGACTCAAATCCATGTG  2131

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2132  TCCAGGGCTTATAATCACTATTCTGTACGATAGGCATGCAATTAAAGAAGACCTGCCTCAAACATTTTCTGTGT  2205

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2206  GACCTGAGGCAAGTCCTTTTATAGCTATAAACTAGGGACAATATTTGCTGTCATTTTTTCTACAAATGTCACAA  2279

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2280  AGAACAAATTTGAGCCTGTCGCTGTGAAAGAACTTAGCAAATGAAAGCATCCTAGGGAGTGTTTTAGATATCGA  2353

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2354  TATTTTTATCCAATTAACTTTTCAAAATGAGTTTATTTGCTCACTGAAACTGAAGTACTTCAACGACGATTAAG  2427

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2428  GAAGTTTTACCTAGAACCACAATCAACAGTTTCTGGAATGCATCTGACAAAGCCTTCTCAATAGCAATCTGGGC  2501

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2502  TATCTTCCCTTTCATAGGAATGACAACGGTCTTAAATCCAACCCAAACTAATGGATTTAAGATGCCTATCTGAG  2575

Query  247  ------------------------------------  246
                                                
Sbjct 2576  TGATCATTGCTACATGTTGGTTAAAAAATAAAAATG  2611

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