Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14174
- Subject:
- NR_131896.1
- Aligned Length:
- 3402
- Identities:
- 247
- Gaps:
- 3119
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGCATGCGCAAATCAGCCCGGCGGGACACAAGTGTCATGGCGCTCTCCATCTGAAGTCTGTGCAGTTTCCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGGGCTTGTGGTTTTTTTCCTCTCAGTTCGGACAGATTCATCTTTCAAGAGGACTTGAGACCAATTTCAGAA 148
Query 1 -------ATGCCTTCTGCAT----TGATACACTACTGGATGACATCGAAGATATCGTGTCTCAGGAAGATTCAA 63
|||||||||||.| ||||..|||.|||||||||||.|||||||||.|.||.|||||||||||||
Sbjct 149 AATCAAGATGCCTTCTGCGTCTTGTGATGTACTGCTGGATGACATAGAAGATATCATATCACAGGAAGATTCAA 222
Query 64 AACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACCCAAAAATATTTG 137
|.|||||.||.||.||.||...|||||||.||||..|.||.||.|||||||||||.||||||||||||||||||
Sbjct 223 AGCCACAGGACAGACAGTTCTCAAGAAAGCATGTGTTTCCTAAAGTACGAAGGCGGAATACCCAAAAATATTTG 296
Query 138 CAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATACGAACATGGGG 211
||| |||||...|||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 297 CAA---GAAGAGCCCAGGCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATCCGAACATGGGG 367
Query 212 TTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATAAAATTACAGGTG 285
.||.||.|||||||||||.|||||||||||.||||||||||||||.|||||.|||||||||||||||||| |.|
Sbjct 368 CTGCTCACATAATAATTCGGATGGAGAATACATGGCTGGACAGCTTGCTGCCTATGGCTATAAAATTACA-GAG 440
Query 286 AA------------------------------------------------------------------------ 287
||
Sbjct 441 AATGCATCAGATGCAGATCTGTGGCTCCTGAACAGTTGTACTGTGAAAAATCCAGCTGAAGACCACTTTAGAAA 514
Query 288 -------------------------------------------------------------------------- 287
Sbjct 515 CTCAATCAAAAAAGCTCAAGAAGAGAATAAGAAAGTTGTCCTCGCTGGCTGTGTTCCCCAAGCCCAGCCTCGTC 588
Query 288 -------------------------------------------------------------------------- 287
Sbjct 589 AGGACTACCTCAAAGGACTGAGCATCATCGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTGTGGAGGAAACA 662
Query 288 -------------------------------------------------------------------------- 287
Sbjct 663 ATAAAAGGTCACTCAGTGAGGCTCCTGGGCCAGAAGAAAGACAACGGGAAGCGCTTGGGTGGAGCTCGACTGGA 736
Query 288 -------------------------------------------------------------------------- 287
Sbjct 737 TTTGCCGAAGATCAGAAAGAATCCGCTGATAGAAATCATTTCCATCAACACGGGGTGTCTCAATGCTTGTACCT 810
Query 288 -------------------------------------------------------------------------- 287
Sbjct 811 ACTGCAAAACTAAACACGCCAGAGGAAACCTGGCCAGCTATCCCATTGATGAGCTTGTGGAGAGAGCCAAGCAA 884
Query 288 -------------------------------------------------------------------------- 287
Sbjct 885 TCCTTTCAAGAGGGTGTTTGTGAGATATGGCTGACCAGCGAGGACACCGGGGCCTATGGCAGAGACATTGGCAC 958
Query 288 -------------------------------------------------------------------------- 287
Sbjct 959 AGATCTCCCCACACTCCTGTGGAAGTTGGTGGAAGTGATTCCTGAGGGAGCCATGCTGAGGCTGGGCATGACAA 1032
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1033 ATCCACCATATATTTTAGAACATCTGGAGGAAATGGCAAAAATCCTCAACCATCCCAGAGTCTACGCTTTCCTC 1106
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1107 CACATCCCAGTGCAGTCCGCCTCTGACAGTGTGCTCATGGACATGAAGAGAGAGTACTGCGTGGCCGACTTCAA 1180
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1181 AAGAGTCGTGGATTTTCTCAAGGAGAAGGTTCCTGGAATAACGATTGCTACGGATATTATCTGTGGTTTTCCTG 1254
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1255 GAGAAACCGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTTCCAAGCCTCTTCATCAAC 1328
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1329 CAGTTCTATCCAAGACCCGGAACTCCTGCTGCAAAAGCCGAGCAGGTTCCAGCACATGTGAAAAAACAAAGGAC 1402
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1403 AAAAGATCTTTCTCGGGTGTTTCATTCCTACAATCCATACGATCACAAGATTGGCGAAAGACAACAAGTGCTAG 1476
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1477 TCACTGAAGAGTCTTTTGACTCCAAGTTTTATGTTGCTCATAACCGATTCTATGAGCAGGTTTTAGTACCAAAG 1550
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1551 AACCCTGCATTCATGGGGAAAATGGTTGAAGTCGACATTTACGAATCAGGAAAGCACTTTTTGAAAGGACAGCC 1624
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1625 AGTATCAGAAACCAGAGTGTATACACCATCCATCAGCAAGCCACTGGCCAAGGGAGAAGTCTCAGGTTTGACAA 1698
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1699 AGGCTCTGGATTATTTATGAAGGCACAAAGGGAGAGAGAGACACATTGGACAAAATTCAAATGTGATATATGTA 1772
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1773 CACGCCCCTTCTTTGGCTGTGATTTGTGCAAAATCACATCCAGGCTATAGCCACAGCCCCTGGGGCTCATCTCT 1846
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1847 GTTCTGAGGTACAAGAAGCTGGCAACGCGCTTTTCACACAGGACAAAGCCATGCTGGCTGTTGATTCTAAAGGC 1920
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1921 CCCATCATCCAGACTCTTGTGCTGTTATTGGAAAAAAACATGAGACTGGCCAAAAGCAGCTCAGGTCACATTAT 1994
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1995 CAGGGATAGAAGTTCTTTGATTGACTCAAATAAAACAGCCTGCACTTGACATCATAAAAAGAAGTGTTTCTTCA 2068
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2069 TGAAATATGAACTTCAACCAAACTGTGTGTTGCATCTCAGCCAGAGCCTATGTCCTCCACTGAAGAAGTTATTA 2142
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2143 GAGAAAAAGGCCAACCTTCCATTTGGACGGTCACCAATCAGATTAGCAATTCCTCTTAGAAGGAAAAACAGCAG 2216
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2217 AGGCAGTTATGTGCGGAGACTTTGACTGAACTCGGGCCTAGGATGTGACAGGTCCTGTCAGTTGTCACTTCACT 2290
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2291 GGGTCAAGGCCTGATCAGAACCTGTGCTCTGTCTAATCCAGGGCTTCAGGTTGGTATTTCTTCCCTGAATGACC 2364
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2365 TCTCTGTAGTTTGTGGTTTTGCTCAGTGAAGGTTTTTCCAGAAGCCAATGTGAGAAGCATGGGTTCTAAGAGCT 2438
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2439 TCTTTGATGAGAACCTTAAAATGATCTGGCATCCAAAATGTTTGGAAAACTTATCAGACTTTAATCCCTACTTG 2512
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2513 GGGATTCATAACAAACACAGAAGGCCTTCTTAAGCTCGGGTCATGTGGAGTTTCTCAAACACATGTGACTCCAG 2586
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2587 AATGTCTTTTTTCTTGCCAGCTACACGGAGAGAGACGTGTTCTGGAAAACACTGACACAACAGCAAACATTGGA 2660
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2661 TCTAAGAGGCTGTGTCTGTGTCTCCACTCACTTTCTGATTGATCCTATCAGGAAGATATCAATGAGTCTCCATT 2734
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2735 ATCTACATATAGAATGACTCTACACTACACTGGTCCGATCTGTCTGTCATGCAGTGAGAAATAAATGCCAATGC 2808
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2809 CAACAGCTCTAAGATAATGACAGGGGCCAGTGAGAGGGCACAGCACATAAACTCTTGCCACACAATCCTGATGA 2882
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2883 CTTGAGCTTGACCCCTGGGACCTAAAGGACACTGACTCTTTAGAGCTGTCCTCTGCCATCCACACATGTGTGTC 2956
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2957 TATTCTCCAATCACACATCATACACACTATAATAATTAGTAATAATAAGCAAAGTAATGGGCTATTAAAATATT 3030
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3031 AATTTATATATGTATATGCCATAGATACAAAGAGCCAGCTTACTACAGCCTTTTCAGTAAAGCTGGTCCATGGC 3104
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3105 TTTGTTTTATAAATAAAGTTTTATTAGAACACAGCCATGCTCGTTTATTTACACATCATCTATGCCTAAGGATG 3178
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3179 GGCTGCAGTGGCAGAGCTGAACAATTGAAGCAGATGAACAATTCCTCCCAGGAAAGTGAAAGGCAAAGGCAGTT 3252
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3253 GCAACTGGCAAGGAACAAAATGTGCTTTTTCCTGTGTGGTTTGTAGAGACCCCCCAAAGTGTTTGCTGTTTGGC 3326
Query 288 ------------------------------------------------------------------------ 287
Sbjct 3327 TGTTCACTGGAAAACAGAAAGAAAAACAAAAATGTGCTGACCCCTGACTTGTAATAAAGGATAATATATAGT 3398
