Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14207
• Subject: NM_001145208.2
• Aligned Length: 1587
• Identities: 374
• Gaps: 1212

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGTGTACTGGGTTTGTTACAGAAGGAGAAAGTGGCAGTTGAAGCATTTCAGATTTGCTGCCTTCTCCTACCTCC  962

Query    1  ----------------------------------------------------------------ATGCCACCCC  10
                                                                            ||||||||||
Sbjct  963  TGAAAATAGGAGAAAGTTACAGCTATTGATGAGGATGATGGCAAGGATTTGCTTAAACAAAGAGATGCCACCCC  1036

Query   11  TGTGTGATGGCTTTGGTACCCGAACACTGATGGTTCAGACATTTTCCCGTTGCATCTTGTGTTCCAAGGATGAA  84
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGTGTGATGGCTTTGGTACCCGAACACTGATGGTTCAGACATTTTCCCGTTGCATCTTGTGTTCCAAGGATGAA  1110

Query   85  GTGGACTTGGATGAGTTATTAGCTGCTAGATTGGTAACGTTTCTGATGGACAATTACCAGGAAATTCTGAAAGT  158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTGGACTTGGATGAGTTATTAGCTGCTAGATTGGTAACGTTTCTGATGGACAATTACCAGGAAATTCTGAAAGT  1184

Query  159  CCCTTTGGCCTTGCAGACCTCTATAGAGGAGCGTGTGGCTCATCTACGAAGAGTCCAGATAAAATACCCAGGAG  232
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct 1185  CCCTTTGGCCTTGCAGACCTCTATAGAGGAGCGTGTGGCTCATCTACGAAGAGTC-------------------  1239

Query  233  CTGATATGGATATCACTTTATCTGCTCCATCATTTTGCCGTCAAATTAGTCCAGAGGAATTTGAATATCAAAGA  306
                                                                                      
Sbjct 1240  --------------------------------------------------------------------------  1239

Query  307  TCATATGGCTCTCAGGAACCTCTGGCAGCCTTGTTGGAGGAAGTCATAACAGATGCCAAACTCTCCAACAAAGA  380
                                                                                      
Sbjct 1240  --------------------------------------------------------------------------  1239

Query  381  GAAAAAGAAGAAACTGAAGCAGTTTCAGAAATCCTATCCTGAAGTCTATCAAGAACGATTTCCTACACCAGAAA  454
                               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240  -------------------CAGTTTCAGAAATCCTATCCTGAAGTCTATCAAGAACGATTTCCTACACCAGAAA  1294

Query  455  GTGCAGCACTTCTGTTTCCTGAAAAACCCAAACCGAAACCACAGCTGCTAATGTGGGCACTAAAGAAGCCTTTC  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295  GTGCAGCACTTCTGTTTCCTGAAAAACCCAAACCGAAACCACAGCTGCTAATGTGGGCACTAAAGAAGCCTTTC  1368

Query  529  CAACCATTTCAAAGAAATAGAAGTTTTCGAATG  561
            ||||||||||||||||.||||||||||||||||
Sbjct 1369  CAACCATTTCAAAGAACTAGAAGTTTTCGAATG  1401