Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14225
- Subject:
- NR_146763.2
- Aligned Length:
- 2861
- Identities:
- 1111
- Gaps:
- 1746
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAAAGCCTGCGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCTCCTAGCCGCGCCGCGGGCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTGCAGCTTCCCCTGCTGTGCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTGCTGTCTTTGTCCGCTACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCACAAAACCGACGCTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGACAATGAATTTTACTTTCGCTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAAAAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAACGGCGCAATCTCGGCTCACTGCAACCTTCACCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGTTCAAGCGATTCACCCGCCTCAGCCTCCCGAGAAGCTGGGATTACAGGCACCCACCAAAACACCTAGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTTTTGTATTTTTAGTAGAGATGAGGTTTCGCCATGTTGGCCAGGCTGGTCTTGAATTCCTGACCTCAGGTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCACCCACCTCGGCCTCCCAATGTGCTGGGATTACAGGTGTGAGCCACTGCACCTGGCCCTATTACCCTACTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGTATGCAGAGCTCATCAGCAGGCTATCCCCACCTCACCCTGTTCTAGACCCAACAAAATGAAGCTCAAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTAAGGATATAGAGAGTGAGGTGGAAACTTGGACTTGGGTGTGAAGCACCAGAGCCCCCACCCACCCTAGGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGGGGCTACAGCTCCTCCCTCCCCATATTTCATCCACAGCCCTGGCTAGAAAAGAAGGATAGAGAGTTGGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGAACAGTCCAGAGTCTGACAGAACTAAGCTGTTGCGTAAGGGTCTGACCTGGCTGCTTGCCATGAACCCCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTTGCTTCTCCTCGAAGCCTCCTTATTACAAAGCTTTCCCTGGAGTCCAGCCTCTTGCCCCTGTGCTGCAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAGGCTCTCCTTGGACATACAGCATTTCATCCCTGAATTGCAATAAGAGAGATATAAAAGATGGAGTTTCGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACCACAACCTCTGCCTCCCGGGTTCAAGCGATT 1036
Query 1 --------------------------------------------------------ATGGTCTTCGTGGGCTTT 18
||||||||||||||||||
Sbjct 1037 CTCCTGCCTCAGTCTCCTGAGTAGCTGGGATTACAGGCTTCCAGGACGTGCATGCCATGGTCTTCGTGGGCTTT 1110
Query 19 GGCTTCCTCATGGTCTTCCTGCAGCGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGC 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCTTCCTCATGGTCTTCCTGCAGCGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGC 1184
Query 93 CCTGCAGTGGTCCACACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGA 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCTGCAGTGGTCCACACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGA 1258
Query 167 GCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCGACCTGGGCAAGACCGGGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1259 GCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCT 1332
Query 241 ACCCAGCTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCT 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACCCAGCTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCT 1406
Query 315 GGGGGTGAGAGTCTGGGGAGGGATGGAGTCGGGGGTGGGGGGTGGTCAAGGTCAGCCTCTGAGCCAGGAGCGTG 388
|||
Sbjct 1407 GGG----------------------------------------------------------------------- 1409
Query 389 GGGGTGGGGGCGGGGTGCTGCCTCTCACCCCACCTCCCCAGGTGAGAGATGCCGGAGGCTCCATGACTATCCAC 462
||||||||||||||||||||||||||||||||||
Sbjct 1410 ----------------------------------------GGTGAGAGATGCCGGAGGCTCCATGACTATCCAC 1443
Query 463 ACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444 ACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG 1517
Query 537 CCAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCT 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1518 CCAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCT 1591
Query 611 TCAATGCTGCACTCACATCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCC 684
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592 TCAATGCTGCACTCACAGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCC 1665
Query 685 AGCACCCTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAA 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1666 AGCACCCTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAA 1739
Query 759 TGCAGCGCTGGCTGGAGGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAG 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 TGCAGCGCTGGCTGGAGGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAG 1813
Query 833 CTGGCTTCTTGGCTAGGACTGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAA 906
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1814 CTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAA 1887
Query 907 GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGT 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGT 1961
Query 981 GGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGC 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1962 GGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGC 2035
Query 1055 GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGG 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2036 GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGG 2109
Query 1129 GGCCTTGG------------------------------------------------------------------ 1136
||||||||
Sbjct 2110 GGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTGTGCCCTGTGGCACTGGGTGGCACCCTCCTC 2183
Query 1137 -----------------------------------------------AGGGCTCCTGCTGAAGCTACCCTTTCT 1163
|||||||||||||||||||||||||||
Sbjct 2184 CATGGTGGGGGGCAGAGAAGCCTCACAGATCCTCCCCTACCACCACCAGGGCTCCTGCTGAAGCTACCCTTTCT 2257
Query 1164 GGACTCCCCCCCCAGACTCCCAGCGCTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCA---------- 1227
||||| ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2258 GGACT-CCCCCCCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGATAAA 2330
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2331 GCCCAGAGACCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCT 2404
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2405 CCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGG 2478
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2479 AGCCATGAGCCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAA 2552
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2553 ATGGTGGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCCTACCA 2626
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2627 GCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGT 2700
Query 1228 ------------------------------------------------- 1227
Sbjct 2701 GAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGCCACTGTCTCTAA 2749
