Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14225
- Subject:
- XR_001737325.1
- Aligned Length:
- 2023
- Identities:
- 1085
- Gaps:
- 935
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGTCTGCCAAAGCCTGCGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCTCCTAGCCGCGCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGGCGACTGCAGCTTCCCCTGCTGTGCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTGCTGTCTTTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCTACAACCACAAAACCGACGCTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGACAATGAATTTTACT 222
Query 1 --------------------------------ATGGTCTTCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCGCTACCCAAGCTTCCAGGACGTGCATGCCATGGTCTTCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAG 296
Query 43 CGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGTCCA 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGTCCA 370
Query 117 GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG 444
Query 191 CGGGGGCCGTGCTCATCTCCTTTGGTGCCGACCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGCCCTG 264
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGGGGCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGCCCTG 518
Query 265 CTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAGAGTCTGGGGAGGGAT 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAGAGTCTGGGGAGGGAT 592
Query 339 GGAGTCGGGGGTGGGGGGTGGTCAAGGTCAGCCTCTGAGCCAGGAGCGTGGGGGTGGGGGCGGGGTGCTGCCTC 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAGTCGGGGGTGGGGGGTGGTCAAGGTCAGCCTCTGAGCCAGGAGCGTGGGGGTGGGGGCGGGGTGCTGCCTC 666
Query 413 TCACCCCACCTCCCCAGGTGAGAGATGCCGGAGGCTCCATGACTATCCACACCTTTGGTGCCTACTTCGGGCTC 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCACCCCACCTCCCCAGGTGAGAGATGCCGGAGGCTCCATGACTATCCACACCTTTGGTGCCTACTTCGGGCTC 740
Query 487 GTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGA 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGA 814
Query 561 CCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACATCGCTGG 634
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 815 CCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGG 888
Query 635 GGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTGCCTTG 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTGCCTTG 962
Query 709 TCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGT 782
|||||||||||||||||||||||||||||||||||
Sbjct 963 TCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACAT--------------------------------------- 997
Query 783 GGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTAGGACTGTCT 856
Sbjct 998 -------------------------------------------------------------------------- 997
Query 857 CCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCAC 930
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 -------------------------GCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCAC 1046
Query 931 AACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGC 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 AACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGC 1120
Query 1005 TTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 TTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC 1194
Query 1079 ACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGG---------------- 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 ACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGGAGGCATCATATTGGTC 1268
Query 1137 -------------------------------------------------------------------------- 1136
Sbjct 1269 TTATGCCTCCTAGACCCCTGTGCCCTGTGGCACTGGGTGGCACCCTCCTCCATGGTGGGGGGCAGAGAAGCCTC 1342
Query 1137 -----------------------AGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCCCCCCAGACTCCCAGC 1187
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1343 ACAGATCCTCCCCTACCACCACCAGGGCTCCTGCTGAAGCTACCCTTTCTGGACT-CCCCCCCAGACTCCCAGC 1415
Query 1188 GCTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCA---------------------------------- 1227
.|||||||||||||||||||||||||||||||||||||||
Sbjct 1416 ACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGTGGAG 1489
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1490 GAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCT 1563
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1564 GCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCC 1637
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1638 TTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAATGGTGGGGAGTGGGGCCGTAACT 1711
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1712 GGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGGCC 1785
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1786 AAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA 1859
Query 1228 ------------------------- 1227
Sbjct 1860 GGGTGATAAACGCCACTGTCTCTAA 1884
