Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14225
- Subject:
- XR_001737329.1
- Aligned Length:
- 2120
- Identities:
- 1111
- Gaps:
- 1005
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGTCTGCCAAAGCCTGCGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCTCCTAGCCGCGCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGGCGACTGCAGCTTCCCCTGCTGTGCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTGCTGTCTTTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCTACAACCACAAAACCGACGCTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGACAATGAATTTTACT 222
Query 1 --------------------------------ATGGTCTTCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCGCTACCCAAGCTTCCAGGACGTGCATGCCATGGTCTTCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAG 296
Query 43 CGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGTCCA 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGTTACGGCTTCAGCAGCGTGGGCTTCACCTTCCTCCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGTCCA 370
Query 117 GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG 444
Query 191 CGGGGGCCGTGCTCATCTCCTTTGGTGCCGACCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGCCCTG 264
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGGGGCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGCCCTG 518
Query 265 CTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAGAGTCTGGGGAGGGAT 338
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCTTCATCTCCTGGG--------------------- 571
Query 339 GGAGTCGGGGGTGGGGGGTGGTCAAGGTCAGCCTCTGAGCCAGGAGCGTGGGGGTGGGGGCGGGGTGCTGCCTC 412
Sbjct 572 -------------------------------------------------------------------------- 571
Query 413 TCACCCCACCTCCCCAGGTGAGAGATGCCGGAGGCTCCATGACTATCCACACCTTTGGTGCCTACTTCGGGCTC 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 ----------------GGTGAGAGATGCCGGAGGCTCCATGACTATCCACACCTTTGGTGCCTACTTCGGGCTC 629
Query 487 GTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGA 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 GTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGA 703
Query 561 CCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACATCGCTGG 634
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 704 CCTCTTCGCCATGATTGGGACCATCTTCCTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGG 777
Query 635 GGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTGCCTTG 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 GGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTGCCTTG 851
Query 709 TCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGT 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 TCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGT 925
Query 783 GGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTAGGACTGTCT 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 926 GGTGGGGACCTCAAGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCT 999
Query 857 CCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCAC 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 CCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCAC 1073
Query 931 AACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGC 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 AACCTCCATGGGATGCCGGGGGTCCTGGGGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGC 1147
Query 1005 TTACGGAGATG--------------------------------------------------------------- 1015
|||||||||||
Sbjct 1148 TTACGGAGATGGGTGAGTTTCCTCCCAACCCGTACTGCAGTCGTCATCCATCTGGAATGACCTCTGTCATTCTC 1221
Query 1016 -------------------------------------------------------------------------- 1015
Sbjct 1222 TTTCACTGTGTGTGACCAAGAAAAAAGAATGAATTCATTCATTCATCCATATTCTGGGAGCAAAGGAAATTGGA 1295
Query 1016 -------------------------------------------------------------------------- 1015
Sbjct 1296 GTTAACAAAACCAACCCAGAAACTGCCTTCCTGGTCCTCTATCAAGTGCAGCAGAAGGTCATGGAACAAATGAC 1369
Query 1016 -------------------------------------------------------------------------- 1015
Sbjct 1370 TTCAAGAGTGTTACTTGTTACTGAAGGGTCAGTAAGAGATAATGACCTTTAGGATCTATTTTTGCACATCAAGG 1443
Query 1016 -------------------------------------------------------------------------- 1015
Sbjct 1444 GTGGGCAAAAGCAACCCGCAAATGGAGTCTTAAAAGGTGCCTAGGTGTCTGCTGGCCTACAAGGGTGGGAAGGT 1517
Query 1016 -------------------------------------------------------------------------- 1015
Sbjct 1518 GTTCCAGGCTGTGGGCCTGGCTTGAGCAGTGGCCTGGAGGTGAGACTCAGCCTGGCATGCACCCTCGAGACCCT 1591
Query 1016 -------------------------------------------------------------------------- 1015
Sbjct 1592 CTTGGCCACTTCCTGTTCCCCAGTGTGAGTTCCAGTGCCATGAGCAGCCCTGGCCCCGGGCTGCATCCCTCTCT 1665
Query 1016 ---------------------------------------GCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGC 1050
|||||||||||||||||||||||||||||||||||
Sbjct 1666 CTCCCTACCCCTGCCTTTCCTCTATCTGGTCTCCCTGCAGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGC 1739
Query 1051 CAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 CAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG 1813
Query 1125 CGGGGGCCTTGG-------------------------------------------------------------- 1136
||||||||||||
Sbjct 1814 CGGGGGCCTTGGAGACCCCTGTGCCCTGTGGCACTGGGTGGCACCCTCCTCCATGGTGGGGGGCAGAGAAGCCT 1887
Query 1137 ------------------------AGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCCCCCCAGACTCCCAG 1186
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1888 CACAGATCCTCCCCTACCACCACCAGGGCTCCTGCTGAAGCTACCCTTTCTGGACT-CCCCCCCAGACTCCCAG 1960
Query 1187 CGCTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCA------- 1227
|.|||||||||||||||||||||||||||||||||||||||
Sbjct 1961 CACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT 2008
