Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14236
- Subject:
- XM_011513724.1
- Aligned Length:
- 4039
- Identities:
- 1307
- Gaps:
- 2729
Alignment
Query 1 ATGAAGCGTATTTTCTCACTGCTAGAAAAGACTTGGCTTGGCGCACCAATACAGTTTGCCTGGCAAAAAACATC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGCGTATTTTCTCACTGCTAGAAAAGACTTGGCTTGGCGCACCAATACAGTTTGCCTGGCAAAAAACATC 74
Query 75 AGGAAACTACCTTGCAGTAACAGGAGCTGATTATATTGTGAAAATCTTTGATCGCCATGGTCAAAAAAGAAGTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGAAACTACCTTGCAGTAACAGGAGCTGATTATATTGTGAAAATCTTTGATCGCCATGGTCAAAAAAGAAGTG 148
Query 149 AAATTAACTTACCTGGTAACTGTGTTGCCATGGATTGGGATAAAGATGGAGATGTCCTAGCAGTGATTGCTGAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAATTAACTTACCTGGTAACTGTGTTGCCATGGATTGGGATAAAGATGGAGATGTCCTAGCAGTGATTGCTGAG 222
Query 223 AAATCTAGCTGCATTTATCTTTGGGATGCCAACACAAATAAGACCAGCCAGTTAGACAATGGCATGAGGGATCA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAATCTAGCTGCATTTATCTTTGGGATGCCAACACAAATAAGACCAGCCAGTTAGACAATGGCATGAGGGATCA 296
Query 297 AATGTCTTTCCTTCTTTGGTCAAAAGTTGGAAGTTTCCTGGCTGTTGGAACTGTTAAAGGAAATTTGCTTATTT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AATGTCTTTCCTTCTTTGGTCAAAAGTTGGAAGTTTCCTGGCTGTTGGAACTGTTAAAGGAAATTTGCTTATTT 370
Query 371 ATAATCATCAGACATCTCGAAAGATTCCTGTCCTTGGAAAACATACTAAGAGAATCACTTGTGGATGTTGGAAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATAATCATCAGACATCTCGAAAGATTCCTGTCCTTGGAAAACATACTAAGAGAATCACTTGTGGATGTTGGAAT 444
Query 445 GCAGAAAATCTGCTTGCTTTAGGTGGTGAAGATAAAATGATTACAGTTAGTAATCAGGAAGGTGACACGATAAG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCAGAAAATCTGCTTGCTTTAGGTGGTGAAGATAAAATGATTACAGTTAGTAATCAGGAAGGTGACACGATAAG 518
Query 519 ACAGACACAAGTGAGATCAGAGCCTAGCAACATGCAGTTTTTCTTGATGAAGATGGATGACCGAACCTCTGCTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACAGACACAAGTGAGATCAGAGCCTAGCAACATGCAGTTTTTCTTGATGAAGATGGATGACCGAACCTCTGCTG 592
Query 593 CTGAAAGCATGATAAGTGTGGTGCTTGGCAAGAAAACTTTGTTTTTTTTAAATCTGAATGAACCAGATAACCCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGAAAGCATGATAAGTGTGGTGCTTGGCAAGAAAACTTTGTTTTTTTTAAATCTGAATGAACCAGATAACCCA 666
Query 667 GCTGATCTTGAATTTCAGCAGGACTTTGGCAACATTGTCTGCTATAATTGGTATGGTGATGGCCGCATCATGAT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTGATCTTGAATTTCAGCAGGACTTTGGCAACATTGTCTGCTATAATTGGTATGGTGATGGCCGCATCATGAT 740
Query 741 TGGTTTTTCATGTGGACATTTTGTGGTCATTTCTACTCATACTGGAGAGCTTGGTCAAGAGATATTTCAGGCTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGTTTTTCATGTGGACATTTTGTGGTCATTTCTACTCATACTGGAGAGCTTGGTCAAGAGATATTTCAGGCTC 814
Query 815 GTAACCATAAAGATAATCTAACCAGCATTGCAGTATCACAGACTCTTAACAAAGTTGCTACATGTGGAGATAAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTAACCATAAAGATAATCTAACCAGCATTGCAGTATCACAGACTCTTAACAAAGTTGCTACATGTGGAGATAAC 888
Query 889 TGTATTAAAATCCAAGACTTGGTTGACTTAAAAGACATGTATGTTATACTCAACCTGGATGAGGAAAATAAAGG 962
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGCATTAAAATCCAAGACTTGGTTGACTTAAAAGACATGTATGTTATACTCAACCTGGATGAGGAAAATAAAGG 962
Query 963 ATTGGGTACCTTGTCCTGGACTGATGATGGCCAGTTGCTAGCACTCTCTACCCAAAGGGGCTCACTTCATGTTT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATTGGGTACCTTGTCCTGGACTGATGATGGCCAGTTGCTAGCACTCTCTACCCAAAGGGGCTCACTTCATGTTT 1036
Query 1037 TCCTGACCAAGCTTCCCATACTTGGGGATGCCTGCAGCACAAGGATTGCCTATCTCACCTCCCTCCTTGAAGTC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCCTGACCAAGCTTCCCATACTTGGGGATGCCTGCAGCACAAGGATTGCCTATCTCACCTCCCTCCTTGAAGTC 1110
Query 1111 ACCGTAGCCAACCCTGTTGAAGGAGAGCTACCAATCACAGTTTCTGTTGATGTGGAACCCAACTTTGTGGCAGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACCGTAGCCAACCCTGTTGAAGGAGAGCTACCAATCACAGTTTCTGTTGATGTGGAACCCAACTTTGTGGCAGT 1184
Query 1185 AGGTCTTTATCATCTGGCTGTAGGAATGAATAATCGAGCTTGGTTTTATGTCCTTGGAGAAAATGCTGTGAAAA 1258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1185 AGGTCTTTATCATCTGGCTGTAGGAATGAATAATCGAGCTTGGTTTTATGTCCTTGGAGAAAATGCTGTG-AAA 1257
Query 1259 AAATTGAAAGATATGGAGTATCTGGGAACAGTAGCCAGTATTAGCCTTCATGC--------------------- 1311
||||||||||||||||||||||||||||||||||||||||||.||||||||.|
Sbjct 1258 AAATTGAAAGATATGGAGTATCTGGGAACAGTAGCCAGTATTTGCCTTCATTCTGACTATGCTGCTGCACTTTT 1331
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1332 TGAAGGCAAAGTCCAGTTACATTTGATAGAAAGCGAAATCTTGGATGCTCAAGAAGAACGTGAGACTCGGCTTT 1405
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1406 TCCCAGCAGTGGATGATAAGTGCCGTATCTTATGCCATGCCTTAACTAGTGATTTCCTCATCTATGGTACAGAT 1479
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1480 ACTGGTGTCGTTCAGTATTTCTACATTGAAGACTGGCAATTCGTTAATGATTATCGACATCCTGTCAGTGTGAA 1553
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1554 AAAGATTTTTCCCGACCCAAATGGGACCAGATTAGTTTTCATTGATGAAAAAAGTGATGGATTTGTTTACTGTC 1627
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1628 CAGTCAATGACGCTACCTATGAGATTCCAGATTTTTCACCAACCATTAAAGGTGTTCTTTGGGAAAACTGGCCA 1701
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1702 ATGGATAAAGGTGTATTTATTGCTTATGATGATGATAAGGTGTACACTTATGTCTTTCACAAGGACACTATACA 1775
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1776 AGGAGCCAAGGTTATTTTGGCTGGTAGCACCAAAGTTCCTTTTGCTCATAAACCTTTGCTGCTATATAATGGAG 1849
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1850 AGCTGACCTGCCAAACACAGAGTGGAAAAGTAAACAACATCTACCTTAGCACCCATGGCTTTCTCAGCAACTTA 1923
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1924 AAAGATACGGGGCCTGACGAACTGAGACCAATGCTGGCACAGAATTTAATGCTAAAGAGGTTTTCTGATGCTTG 1997
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1998 GGAAATGTGCAGGATTCTGAATGATGAGGCTGCCTGGAATGAGTTGGCCAGAGCTTGTCTACATCACATGGAAG 2071
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2072 TGGAGTTTGCAATCCGTGTTTATCGGAGAATTGGAAATGTTGGCATAGTGATGTCCTTGGAACAAATAAAGGGA 2145
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2146 ATAGAGGACTACAATCTTTTGGCAGGACACCTTGCCATGTTTACCAACGATTATAACCTGGCTCAGGACTTGTA 2219
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2220 CCTTGCATCCAGCTGTCCTATTGCTGCCCTGGAGGTATGGCAGCAAATGAGAAGGGATTTACAGCATTGGGACA 2293
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2294 GTGCTCTACAACTGGCAAAGCATTTGGCCCCAGACCAGATACCTTTTATATCAAAAGAATATGCTATTCAGCTT 2367
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2368 GAATTCGCGGGTGATTATGTAAATGCTTTGGCTCATTATGAGAAAGGAATAACAGGTGATAATAAGGAACATGA 2441
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2442 TGAAGCTTGTCTGGCTGGAGTGGCCCAGATGTCCATAAGAATGGGAGACATACGTCGAGGGGTTAACCAAGCCC 2515
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2516 TCAAGCATCCCAGCAGGGTCCTTAAAAGAGACTGTGGAGCCATATTGGAGAATATGAAGCAATTTTCAGAAGCG 2589
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2590 GCCCAACTGTATGAAAAAGGTCTCTACTACGATAAAGCAGCATCTGTTTACATCCGCTCTAAGAATTGGGCAAA 2663
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2664 AGTTGGTGATCTTCTGCCCCACGTTTCTTCTCCTAAGATCCATTTGCAGTATGCCAAAGCCAAGGAAGCAGATG 2737
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2738 GAAGATACAAAGAAGCTGTTGTAGCTTATGAAAATGCAAAACAGTGGCAAAGTGTAATCCGCATCTATCTGGAT 2811
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2812 CACCTCAATAATCCTGAAAAAGCTGTCAATATTGTTAGAGAGACCCAGTCTCTGGATGGAGCCAAAATGGTAGC 2885
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2886 CAGGTTTTTTCTACAGCTTGGTGACTATGGGTCTGCCATCCAGTTTCTTGTCATGTCCAAATGCAACAATGAAG 2959
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2960 CTTTCACACTGGCTCAGCAACACAACAAAATGGAAATCTATGCAGATATTATTGGTTCTGAAGACACTACTAAT 3033
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3034 GAAGACTATCAAAGCATTGCCTTATACTTTGAAGGAGAAAAGAGATATCTTCAGGCTGGAAAATTCTTCTTGCT 3107
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3108 GTGTGGCCAATATTCACGAGCACTTAAACACTTCCTGAAATGCCCAAGCTCGGAAGATAATGTGGCAATAGAAA 3181
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3182 TGGCAATTGAAACTGTTGGTCAGGCCAAAGATGAACTGCTGACCAATCAGCTGATAGACCATCTCCTGGGGGAG 3255
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3256 AACGATGGCATGCCTAAGGATGCCAAGTACCTGTTCCGCTTGTACATGGCTCTGAAGCAATACCGAGAAGCTGC 3329
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3330 CCAGACTGCCATCATCATTGCCAGAGAAGAGCAGTCTGCAGGCAACTACCGGAATGCACACGATGTTCTCTTCA 3403
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3404 GTATGTATGCAGAACTGAAATCCCAGAAGATCAAAATTCCCTCCGAGATGGCCACCAACCTCATGATTCTGCAC 3477
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3478 AGCTATATACTAGTAAAGATTCATGTTAAAAATGGAGATCACATGAAAGGGGCTCGCATGCTCATTCGGGTGGC 3551
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3552 CAACAACATCAGCAAATTTCCATCACACATTGTACCCATCCTGACGTCAACTGTGATTGAGTGTCACAGGGCAG 3625
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3626 GCCTGAAGAACTCTGCTTTCAGCTTCGCAGCTATGTTGATGAGGCCTGAATACCGCAGCAAAATAGATGCCAAA 3699
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3700 TACAAAAAGAAGATCGAGGGAATGGTCAGGAGACCCGATATATCTGAGATAGAAGAGGCCACGACTCCATGTCC 3773
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3774 ATTCTGCAAATTTCTTCTCCCAGAGTGTGAACTCCTCTGTCCTGGATGTAAAAACAGTATCCCATATTGCATTG 3847
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3848 CAACAGGTCGACACATGTTGAAAGATGACTGGACGGTGTGTCCACATTGTGACTTCCCTGCTCTATACTCAGAA 3921
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3922 TTGAAGATCATGCTAAACACTGAAAGCACATGTCCTATGTGTTCAGAAAGATTAAACGCTGCTCAGCTGAAAAA 3995
Query 1312 ------------------------------------------- 1311
Sbjct 3996 GATTTCAGACTGTACCCAGTACCTGCGAACGGAGGAGGAACTG 4038
