Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14236
- Subject:
- XM_011513725.2
- Aligned Length:
- 4039
- Identities:
- 1241
- Gaps:
- 2795
Alignment
Query 1 ATGAAGCGTATTTTCTCACTGCTAGAAAAGACTTGGCTTGGCGCACCAATACAGTTTGCCTGGCAAAAAACATC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGCGTATTTTCTCACTGCTAGAAAAGACTTGGCTTGGCGCACCAATACAGTTTGCCTGGCAAAAAACATC 74
Query 75 AGGAAACTACCTTGCAGTAACAGGAGCTGATTATATTGTGAAAATCTTTGATCGCCATGGTCAAAAAAGAAGTG 148
||||||||||||||||||||||
Sbjct 75 AGGAAACTACCTTGCAGTAACA---------------------------------------------------- 96
Query 149 AAATTAACTTACCTGGTAACTGTGTTGCCATGGATTGGGATAAAGATGGAGATGTCCTAGCAGTGATTGCTGAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 97 --------------GGTAACTGTGTTGCCATGGATTGGGATAAAGATGGAGATGTCCTAGCAGTGATTGCTGAG 156
Query 223 AAATCTAGCTGCATTTATCTTTGGGATGCCAACACAAATAAGACCAGCCAGTTAGACAATGGCATGAGGGATCA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 157 AAATCTAGCTGCATTTATCTTTGGGATGCCAACACAAATAAGACCAGCCAGTTAGACAATGGCATGAGGGATCA 230
Query 297 AATGTCTTTCCTTCTTTGGTCAAAAGTTGGAAGTTTCCTGGCTGTTGGAACTGTTAAAGGAAATTTGCTTATTT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 231 AATGTCTTTCCTTCTTTGGTCAAAAGTTGGAAGTTTCCTGGCTGTTGGAACTGTTAAAGGAAATTTGCTTATTT 304
Query 371 ATAATCATCAGACATCTCGAAAGATTCCTGTCCTTGGAAAACATACTAAGAGAATCACTTGTGGATGTTGGAAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 ATAATCATCAGACATCTCGAAAGATTCCTGTCCTTGGAAAACATACTAAGAGAATCACTTGTGGATGTTGGAAT 378
Query 445 GCAGAAAATCTGCTTGCTTTAGGTGGTGAAGATAAAATGATTACAGTTAGTAATCAGGAAGGTGACACGATAAG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 379 GCAGAAAATCTGCTTGCTTTAGGTGGTGAAGATAAAATGATTACAGTTAGTAATCAGGAAGGTGACACGATAAG 452
Query 519 ACAGACACAAGTGAGATCAGAGCCTAGCAACATGCAGTTTTTCTTGATGAAGATGGATGACCGAACCTCTGCTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 ACAGACACAAGTGAGATCAGAGCCTAGCAACATGCAGTTTTTCTTGATGAAGATGGATGACCGAACCTCTGCTG 526
Query 593 CTGAAAGCATGATAAGTGTGGTGCTTGGCAAGAAAACTTTGTTTTTTTTAAATCTGAATGAACCAGATAACCCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 CTGAAAGCATGATAAGTGTGGTGCTTGGCAAGAAAACTTTGTTTTTTTTAAATCTGAATGAACCAGATAACCCA 600
Query 667 GCTGATCTTGAATTTCAGCAGGACTTTGGCAACATTGTCTGCTATAATTGGTATGGTGATGGCCGCATCATGAT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GCTGATCTTGAATTTCAGCAGGACTTTGGCAACATTGTCTGCTATAATTGGTATGGTGATGGCCGCATCATGAT 674
Query 741 TGGTTTTTCATGTGGACATTTTGTGGTCATTTCTACTCATACTGGAGAGCTTGGTCAAGAGATATTTCAGGCTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 675 TGGTTTTTCATGTGGACATTTTGTGGTCATTTCTACTCATACTGGAGAGCTTGGTCAAGAGATATTTCAGGCTC 748
Query 815 GTAACCATAAAGATAATCTAACCAGCATTGCAGTATCACAGACTCTTAACAAAGTTGCTACATGTGGAGATAAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 749 GTAACCATAAAGATAATCTAACCAGCATTGCAGTATCACAGACTCTTAACAAAGTTGCTACATGTGGAGATAAC 822
Query 889 TGTATTAAAATCCAAGACTTGGTTGACTTAAAAGACATGTATGTTATACTCAACCTGGATGAGGAAAATAAAGG 962
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 TGCATTAAAATCCAAGACTTGGTTGACTTAAAAGACATGTATGTTATACTCAACCTGGATGAGGAAAATAAAGG 896
Query 963 ATTGGGTACCTTGTCCTGGACTGATGATGGCCAGTTGCTAGCACTCTCTACCCAAAGGGGCTCACTTCATGTTT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 ATTGGGTACCTTGTCCTGGACTGATGATGGCCAGTTGCTAGCACTCTCTACCCAAAGGGGCTCACTTCATGTTT 970
Query 1037 TCCTGACCAAGCTTCCCATACTTGGGGATGCCTGCAGCACAAGGATTGCCTATCTCACCTCCCTCCTTGAAGTC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 TCCTGACCAAGCTTCCCATACTTGGGGATGCCTGCAGCACAAGGATTGCCTATCTCACCTCCCTCCTTGAAGTC 1044
Query 1111 ACCGTAGCCAACCCTGTTGAAGGAGAGCTACCAATCACAGTTTCTGTTGATGTGGAACCCAACTTTGTGGCAGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 ACCGTAGCCAACCCTGTTGAAGGAGAGCTACCAATCACAGTTTCTGTTGATGTGGAACCCAACTTTGTGGCAGT 1118
Query 1185 AGGTCTTTATCATCTGGCTGTAGGAATGAATAATCGAGCTTGGTTTTATGTCCTTGGAGAAAATGCTGTGAAAA 1258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1119 AGGTCTTTATCATCTGGCTGTAGGAATGAATAATCGAGCTTGGTTTTATGTCCTTGGAGAAAATGCTGTG-AAA 1191
Query 1259 AAATTGAAAGATATGGAGTATCTGGGAACAGTAGCCAGTATTAGCCTTCATGC--------------------- 1311
||||||||||||||||||||||||||||||||||||||||||.||||||||.|
Sbjct 1192 AAATTGAAAGATATGGAGTATCTGGGAACAGTAGCCAGTATTTGCCTTCATTCTGACTATGCTGCTGCACTTTT 1265
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1266 TGAAGGCAAAGTCCAGTTACATTTGATAGAAAGCGAAATCTTGGATGCTCAAGAAGAACGTGAGACTCGGCTTT 1339
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1340 TCCCAGCAGTGGATGATAAGTGCCGTATCTTATGCCATGCCTTAACTAGTGATTTCCTCATCTATGGTACAGAT 1413
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1414 ACTGGTGTCGTTCAGTATTTCTACATTGAAGACTGGCAATTCGTTAATGATTATCGACATCCTGTCAGTGTGAA 1487
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1488 AAAGATTTTTCCCGACCCAAATGGGACCAGATTAGTTTTCATTGATGAAAAAAGTGATGGATTTGTTTACTGTC 1561
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1562 CAGTCAATGACGCTACCTATGAGATTCCAGATTTTTCACCAACCATTAAAGGTGTTCTTTGGGAAAACTGGCCA 1635
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1636 ATGGATAAAGGTGTATTTATTGCTTATGATGATGATAAGGTGTACACTTATGTCTTTCACAAGGACACTATACA 1709
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1710 AGGAGCCAAGGTTATTTTGGCTGGTAGCACCAAAGTTCCTTTTGCTCATAAACCTTTGCTGCTATATAATGGAG 1783
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1784 AGCTGACCTGCCAAACACAGAGTGGAAAAGTAAACAACATCTACCTTAGCACCCATGGCTTTCTCAGCAACTTA 1857
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1858 AAAGATACGGGGCCTGACGAACTGAGACCAATGCTGGCACAGAATTTAATGCTAAAGAGGTTTTCTGATGCTTG 1931
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1932 GGAAATGTGCAGGATTCTGAATGATGAGGCTGCCTGGAATGAGTTGGCCAGAGCTTGTCTACATCACATGGAAG 2005
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2006 TGGAGTTTGCAATCCGTGTTTATCGGAGAATTGGAAATGTTGGCATAGTGATGTCCTTGGAACAAATAAAGGGA 2079
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2080 ATAGAGGACTACAATCTTTTGGCAGGACACCTTGCCATGTTTACCAACGATTATAACCTGGCTCAGGACTTGTA 2153
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2154 CCTTGCATCCAGCTGTCCTATTGCTGCCCTGGAGGTATGGCAGCAAATGAGAAGGGATTTACAGCATTGGGACA 2227
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2228 GTGCTCTACAACTGGCAAAGCATTTGGCCCCAGACCAGATACCTTTTATATCAAAAGAATATGCTATTCAGCTT 2301
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2302 GAATTCGCGGGTGATTATGTAAATGCTTTGGCTCATTATGAGAAAGGAATAACAGGTGATAATAAGGAACATGA 2375
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2376 TGAAGCTTGTCTGGCTGGAGTGGCCCAGATGTCCATAAGAATGGGAGACATACGTCGAGGGGTTAACCAAGCCC 2449
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2450 TCAAGCATCCCAGCAGGGTCCTTAAAAGAGACTGTGGAGCCATATTGGAGAATATGAAGCAATTTTCAGAAGCG 2523
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2524 GCCCAACTGTATGAAAAAGGTCTCTACTACGATAAAGCAGCATCTGTTTACATCCGCTCTAAGAATTGGGCAAA 2597
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2598 AGTTGGTGATCTTCTGCCCCACGTTTCTTCTCCTAAGATCCATTTGCAGTATGCCAAAGCCAAGGAAGCAGATG 2671
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2672 GAAGATACAAAGAAGCTGTTGTAGCTTATGAAAATGCAAAACAGTGGCAAAGTGTAATCCGCATCTATCTGGAT 2745
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2746 CACCTCAATAATCCTGAAAAAGCTGTCAATATTGTTAGAGAGACCCAGTCTCTGGATGGAGCCAAAATGGTAGC 2819
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2820 CAGGTTTTTTCTACAGCTTGGTGACTATGGGTCTGCCATCCAGTTTCTTGTCATGTCCAAATGCAACAATGAAG 2893
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2894 CTTTCACACTGGCTCAGCAACACAACAAAATGGAAATCTATGCAGATATTATTGGTTCTGAAGACACTACTAAT 2967
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2968 GAAGACTATCAAAGCATTGCCTTATACTTTGAAGGAGAAAAGAGATATCTTCAGGCTGGAAAATTCTTCTTGCT 3041
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3042 GTGTGGCCAATATTCACGAGCACTTAAACACTTCCTGAAATGCCCAAGCTCGGAAGATAATGTGGCAATAGAAA 3115
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3116 TGGCAATTGAAACTGTTGGTCAGGCCAAAGATGAACTGCTGACCAATCAGCTGATAGACCATCTCCTGGGGGAG 3189
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3190 AACGATGGCATGCCTAAGGATGCCAAGTACCTGTTCCGCTTGTACATGGCTCTGAAGCAATACCGAGAAGCTGC 3263
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3264 CCAGACTGCCATCATCATTGCCAGAGAAGAGCAGTCTGCAGGCAACTACCGGAATGCACACGATGTTCTCTTCA 3337
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3338 GTATGTATGCAGAACTGAAATCCCAGAAGATCAAAATTCCCTCCGAGATGGCCACCAACCTCATGATTCTGCAC 3411
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3412 AGCTATATACTAGTAAAGATTCATGTTAAAAATGGAGATCACATGAAAGGGGCTCGCATGCTCATTCGGGTGGC 3485
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3486 CAACAACATCAGCAAATTTCCATCACACATTGTACCCATCCTGACGTCAACTGTGATTGAGTGTCACAGGGCAG 3559
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3560 GCCTGAAGAACTCTGCTTTCAGCTTCGCAGCTATGTTGATGAGGCCTGAATACCGCAGCAAAATAGATGCCAAA 3633
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3634 TACAAAAAGAAGATCGAGGGAATGGTCAGGAGACCCGATATATCTGAGATAGAAGAGGCCACGACTCCATGTCC 3707
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3708 ATTCTGCAAATTTCTTCTCCCAGAGTGTGAACTCCTCTGTCCTGGATGTAAAAACAGTATCCCATATTGCATTG 3781
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3782 CAACAGGTCGACACATGTTGAAAGATGACTGGACGGTGTGTCCACATTGTGACTTCCCTGCTCTATACTCAGAA 3855
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3856 TTGAAGATCATGCTAAACACTGAAAGCACATGTCCTATGTGTTCAGAAAGATTAAACGCTGCTCAGCTGAAAAA 3929
Query 1312 ------------------------------------------- 1311
Sbjct 3930 GATTTCAGACTGTACCCAGTACCTGCGAACGGAGGAGGAACTG 3972
