Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14249
Subject:
NM_022908.3
Aligned Length:
1561
Identities:
1375
Gaps:
179

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCGAGTGGAGAGCGGTTCTGCGCAGGAAAGAGGAATTTTGTTGGAAAGCCTGTCGACGTTGCTAGAAAAGAC  74

Query    1  --------------------ATGC----GGAGACTGG----TGCAC-GACCTCCTGCCCCCCGAGGTCTGCAGT  45
                                .|||    |||.||.||    || || |||||||||||||||||||||||||||
Sbjct   75  CACAGCATCTCACGAGGGGCGTGCGCCGGGAAACCGGGAGTTG-ACGGACCTCCTGCCCCCCGAGGTCTGCAGT  147

Query   46  CTCCTGAACCCAGCAGCCATCTACGCCAACAACGAGATCAGCCTGCGTGACGTTGAGGTCTACGGCTTTGACTA  119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  CTCCTGAACCCAGCAGCCATCTACGCCAACAACGAGATCAGCCTGCGTGACGTTGAGGTCTACGGCTTTGACTA  221

Query  120  CGACTACACCCTGGACCAGTATGCAGACGCACTGCACCCCGAGATCTTCAGTACCGCCCGTGACATCCTGATCG  193
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  222  CGACTACACCCTGGCCCAGTATGCAGACGCACTGCACCCCGAGATCTTCAGTACCGCCCGTGACATCCTGATCG  295

Query  194  AGCACTAC------------------------------------------------------------------  201
            ||||||||                                                                  
Sbjct  296  AGCACTACAAGTACCCAGAAGGGATTCGGAAGTATGACTACAACCCCAGCTTTGCCATCCGTGGCCTCCACTAT  369

Query  202  ---------AAGAGCCTTCTGATGAAGATTGACGCCTTCCACTACGTGCAGCTGGGGACAGCCTACAGGGGCCT  266
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  GACATTCAGAAGAGCCTTCTGATGAAGATTGACGCCTTCCACTACGTGCAGCTGGGGACAGCCTACAGGGGCCT  443

Query  267  CCAGCCTGTGCCAGACGAGGAGGTGATTGAGCTGTATGGGGGTACCCAGCACATCCCACTATACCAGATGAGTG  340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  CCAGCCTGTGCCAGACGAGGAGGTGATTGAGCTGTATGGGGGTACCCAGCACATCCCACTATACCAGATGAGTG  517

Query  341  GCTTCTATGGCAAGGGTCCCTCCATTAAGCAGTTCATGGACATCTTCTCGCTACCGGAGATGGCTCTGCTGTCC  414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  GCTTCTATGGCAAGGGTCCCTCCATTAAGCAGTTCATGGACATCTTCTCGCTACCGGAGATGGCTCTGCTGTCC  591

Query  415  TGTGTGGTGGACTACTTTCTGGGCCACAGCCTGGAGTTTGACCAAGCACATCTCTACAAGGACGTGACGGACGC  488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  TGTGTGGTGGACTACTTTCTGGGCCACAGCCTGGAGTTTGACCAAGCACATCTCTACAAGGACGTGACGGACGC  665

Query  489  CATCCGAGACGTGCATGTGAAGGGCCTCATGTACCAGTGGATCGAGCAGGACATGGAGAAGTACATCCTGAGAG  562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  CATCCGAGACGTGCATGTGAAGGGCCTCATGTACCAGTGGATCGAGCAGGACATGGAGAAGTACATCCTGAGAG  739

Query  563  GGGATGAGACGTTTGCTGTCCTGAGCCGCCTGGTGGCCCATGGGAAGCAGCTGTTCCTCATCACCAACAGTCCT  636
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  740  GGGATGAGACGTTTGCTGTCCTGAGCCGCCTGGTGGCCCATGGGAAACAGCTGTTCCTCATCACCAACAGTCCT  813

Query  637  TTCAGCTTCGTAGACAAGGGGATGCGGCACATGGTGGGTCCCGATTGGCGCCAGCTCTTCGATGTGGTCATTGT  710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  TTCAGCTTCGTAGACAAGGGGATGCGGCACATGGTGGGTCCCGATTGGCGCCAGCTCTTCGATGTGGTCATTGT  887

Query  711  CCAGGCAGACAAGCCCAGCTTCTTCACTGACCGGCGCAAGCCTTTCAGAAAACTCGATGAGAAGGGCTCACTTC  784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  CCAGGCAGACAAGCCCAGCTTCTTCACTGACCGGCGCAAGCCTTTCAGAAAACTCGATGAGAAGGGCTCACTTC  961

Query  785  AGTGGGACCGGATCACCCGCTTGGAAAAGGGCAAGATCTATCGGCAGGGAAACCTGTTTGACTTCTTGCGCTTG  858
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  962  AGTGGGACCGGATCACCCGCTTGGAAAAGGGCAAGATCTATCGGCAGGGAAACCTGTTTGACTTCTTACGCTTG  1035

Query  859  ACGGAATGGCGTGGCCCCCGCGTGCTCTACTTCGGGGACCACCTCTATAGTGATCTGGCGGATCTCATGCTGCG  932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  ACGGAATGGCGTGGCCCCCGCGTGCTCTACTTCGGGGACCACCTCTATAGTGATCTGGCGGATCTCATGCTGCG  1109

Query  933  GCACGGCTGGCGCACAGGCGCCATCATCCCCGAGCTGGAGCGTGAGATCCGCATCATCAACACGGAGCAGTACA  1006
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GCACGGCTGGCGCACAGGCGCCATCATCCCCGAGCTGGAGCGTGAGATCCGCATCATCAACACGGAGCAGTACA  1183

Query 1007  TGCACTCGCTGACGTGGCAACAGGCGCTCACGGGGCTGCTGGAGCGCATGCAGACCTATCAGGACGCGGAGTCG  1080
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  TGCACTCGCTGACGTGGCAGCAGGCGCTCACGGGGCTGCTGGAGCGCATGCAGACCTATCAGGACGCGGAGTCG  1257

Query 1081  AGGCAGGTGCTGGCTGCCTGGATGAAAGAGCGGCAGGAGCTGAGGTGCATCACCAAGGCCCTGTTCAATGCGCA  1154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  AGGCAGGTGCTGGCTGCCTGGATGAAAGAGCGGCAGGAGCTGAGGTGCATCACCAAGGCCCTGTTCAATGCGCA  1331

Query 1155  GTTCGGCAGCATCTTCCGCACCTTCCACAACCCCACCTACTTCTCAAGGCGCCTCGTGCGCTTCTCTGACCTCT  1228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  GTTCGGCAGCATCTTCCGCACCTTCCACAACCCCACCTACTTCTCAAGGCGCCTCGTGCGCTTCTCTGACCTCT  1405

Query 1229  ACATGGCCTCCCTCAGCTGCCTGCTCAACTACCGCGTGGACTTCACCTTCTACCCACGCCGTACGCCGCTGCAG  1302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  ACATGGCCTCCCTCAGCTGCCTGCTCAACTACCGCGTGGACTTCACCTTCTACCCACGCCGTACGCCGCTGCAG  1479

Query 1303  CACGAGGCACCCCTCTGGATGGACCAGCTCTGCACCGGCTGCATGAAGACCCCCTTCCTTGGTGACATGGCCCA  1376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480  CACGAGGCACCCCTCTGGATGGACCAGCTCTGCACCGGCTGCATGAAGACCCCCTTCCTTGGTGACATGGCCCA  1553

Query 1377  CATCCGC  1383
            |||||||
Sbjct 1554  CATCCGC  1560

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