Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14270
- Subject:
- XR_001781568.1
- Aligned Length:
- 2132
- Identities:
- 854
- Gaps:
- 1200
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCCAGACTACAGCTCCCGGCATGCCCTGCACCTGGTACTCGCCCGCGGCGTGCGGAGGGAAGGATGCAGACAA 74
Query 1 -----------ATGAGGATGGAGGCCGGTGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGCCGCAGGCGGC 63
|||||||||||||||||.|||||||||||.||||.||||||||||||||||.|||..||||||
Sbjct 75 CGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCCCGGGGGCGGC 148
Query 64 TGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGTG-CGGCGAGC 136
||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||| ||| ||||
Sbjct 149 TGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGTGTCGG-GAGC 221
Query 137 AGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGGGCCTACCTC 210
|||||||||||||||||||||||||.|||||.||||||||.||.||||||.|||||||||||||||||||||||
Sbjct 222 AGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGGGGCCTACCTC 295
Query 211 ATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAAGGA 284
||||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..||||||||||||||||
Sbjct 296 ATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCTGGACAAGGA 369
Query 285 CATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCATCAAAGACC 358
||||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.||||||||||||.
Sbjct 370 CATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATCATCAAAGACA 443
Query 359 GGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCATGTGTACCGCGTGCTGCAGTGCCAGGAG 432
|||||||.|||||.||||||||.||..|||||||.|||||.||||||||.|||||.||||||||||||||.|||
Sbjct 444 GGATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCAGTGCCAAGAG 517
Query 433 GAGGAGCTCACGCAAATGGTCTCAACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCGTC 506
|||||||||||.||.|||||.||.||.|||||.||.|||||||||||||||||||||||||||||||||||.||
Sbjct 518 GAGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTC 591
Query 507 CTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCACCCCAAACG 580
|||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||.|||||.|||
Sbjct 592 CTACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGCTCCCCACACG 665
Query 581 GGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGGAGGAG 654
|.||||||||.|||||||..|||||..|||||||||||||.|||||||||||||||||||.||.|| ||
Sbjct 666 GCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCGGC------AG 733
Query 655 GAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAGCCCAGTCATCTCAGGA 728
||||||||||||||||||||||..|||||||||||||||||.|||||.|||||||||||||.||||||||||||
Sbjct 734 GAGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGATGCCCAGGAGAAAGCCCTGTCATCTCAGGA 807
Query 729 TCCCGCTAACCTTTTCTCCCTCCCACCACTG---CCTCCTCCTCCGCTTCCCGCTGGAGG-------------- 785
|||||||||||||||||||||||||||||.| |||||||||||||||||.||||||||
Sbjct 808 TCCCGCTAACCTTTTCTCCCTCCCACCACCGCCTCCTCCTCCTCCGCTTCCTGCTGGAGGTCCTGCTTCATCTT 881
Query 786 --------------------------------------------TTCCC------------------------- 790
|||||
Sbjct 882 CATCCACCTCCTCTTCCTCCTGGATCTCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGCCCAGGTTTCCTC 955
Query 791 -------------------------------------------------------------------------- 790
Sbjct 956 TCCGCCTGCTCCCGTCTCCACCCTGGGGCTGCCCTAGTCCCAGTCTCCCGCGCCCTCTCCCCAAGCCCCCTCGC 1029
Query 791 -------------------------------------------------------------------------- 790
Sbjct 1030 CCTGCATCCCCAAGCATCCTGCCTGCCGCCTCCTTCGCCCCTTCCAGCCCCTCCTGCCTCCTGGCCTGGGGAGG 1103
Query 791 -------------------------------------------------------------------------- 790
Sbjct 1104 AGGGGCGTGGCCGCATCTGCTCTTTGTCCTCCAACCCAGCAGAGCACCTCTGAGGCTGGCCTTGGCCACAGGCC 1177
Query 791 ----------------------------------------------GTCCGCACCCTCTCAGACCTGAGGCTGA 818
||||||||||||.||||||..||.||||
Sbjct 1178 CCACTCTTCCCACTTGCCTCCTCACGTTTCCTCCTTGCAGGTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGA 1251
Query 819 GCTTGCAGTGAGGGCTTCTCCTCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTGCTGTTACAAGCCAGAGG 892
||||||||||||.| ||||||||||||.||||||||||||||||||||..|||||||.||||||||||||||
Sbjct 1252 GCTTGCAGTGAGAG---CTCCTCGGCCCCGCGCCCGCCCCCAGAGCTGCCGCCCCTGCTATTACAAGCCAGAGG 1322
Query 893 CACCCGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGGGGTTCCCATC------------------------ 942
||||||||||||||.|||||||||||||||||||||||||||||||.|||
Sbjct 1323 CACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCAC 1396
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1397 GGGGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCCTGCATCTGCCGGGCTGAG 1470
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1471 ACTCACTCCTGCCTTGGGGCCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCT 1544
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1545 CCAGGCAGAGACGCCAAGGCCAAACTGTGGCACTACCTACCCATATCTTCCAGGCCCTTTTGTCCCCTCACCTG 1618
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1619 GGCGCCCTTGCTGCATGGCGGATACACTCCCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTCTATG 1692
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1693 GCACCATAGGGTCATCCTCTCCTCCCACCTACCTCACAGGGTTGTTGTGAGAATCAGGGAGGATCATGGGGTTC 1766
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1767 CTGGGAGCCCTGAGTGTGTTGGGGCTACAATCATTACCTTCTTAGGGGAAGGGCTCTAGCCCCGCCCCTGTATG 1840
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1841 GGACACTATGGCCTCAGATACTGGTGGGGGACAATGTGAGGACTTTGCCAGGCAGGAAGGAAGTTACAGGCTTA 1914
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1915 ACAGCACCTTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGAT 1988
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1989 GGGGAAGGGGACAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACCCCGGGATGGGCACATGTCTG 2062
Query 943 ------------------------------------------------------------ 942
Sbjct 2063 TCAGTTGTGTCCCACCCGCCATGAAATAAAGCTGAACAAACAGGCTTGGCCTGGCTGCCA 2122
