Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14276
- Subject:
- XR_001747203.2
- Aligned Length:
- 3216
- Identities:
- 1531
- Gaps:
- 1683
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTTGCCGGCTGCGGCAGTAGCTCTCGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCACACCAGCGACCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCGCACAGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCATGGAGCTCGAAGCACGCAGGGCTGGCCTCTCCAGAGCTAGCAGATTCCTTCTGGACCTGTAGGGTGCCG 222
Query 1 ----------------ATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGGAGACCTGAGCTCCG 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGGAGACCTGAGCTCCG 296
Query 59 GCTCTCTGAGCTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTA 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCTCTCTGAGCTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTA 370
Query 133 AGGAAGCAACAACGGCTGCTGAACGGGCCCCCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGCGTCATCCT 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGAAGCAACAACGGCTGCTGAACGGGCCCCCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGCGTCATCCT 444
Query 207 CATCAACTCCCCCATCGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAG 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATCAACTCCCCCATCGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAG 518
Query 281 CAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAA 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAA 592
Query 355 GGCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAG 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAG 666
Query 429 CACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCC 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCC 740
Query 503 GTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCGCCTGGTAGTGGAG 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCGCCTGGTAGTGGAG 814
Query 577 AAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTC 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTC 888
Query 651 CGACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAGTGG 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAGTGG 962
Query 725 ACCATGGTGGGCTGGCCGAGGAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTT 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACCATGGTGGGCTGGCCGAGGAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTT 1036
Query 799 GACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGAC 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGAC 1110
Query 873 CGGCCGGTATCCTGCCTACAAGGAGATGGTTTCTGAGTACTGCTGGCTGGACCGACTGAGCAACGGGGTGCTGC 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGGCCGGTATCCTGCCTACAAGGAGATGGTTTCTGAGTACTGCTGGCTGGACCGACTGAGCAACGGGGTGCTGC 1184
Query 947 AGCAGCTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGC 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCAGCTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGC 1258
Query 1021 TCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCG 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCG 1332
Query 1095 GGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG 1406
Query 1169 TCATCCTCAGGGACACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAG 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCATCCTCAGGGACACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAG 1480
Query 1243 TCTCCCAAGACGGCTTTGCTGCTGGCCCTCAGCCGACCCCGGCCCCCCATCACGCGCTCCCAGAGCTATCTGAC 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCTCCCAAGACGGCTTTGCTGCTGGCCCTCAGCCGACCCCGGCCCCCCATCACGCGCTCCCAGAGCTATCTGAC 1554
Query 1317 CTTGTGGGAGGAGAAGCAGCAGCG---GAAGGAGAAGTCGGGGTCCCCTGGGGAGAAGGGTGCCCTGCAGCGCT 1387
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGAGAAGTCGGGGTCCCCTGGGGAGAAGGGTGCCCTGCAGCGCT 1628
Query 1388 CCAAGACGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGGGAGGCTAGCGCGGGACGGGCGCAGAGAGGCC 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCAAGACGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGGGAGGCTAGCGCGGGACGGGCGCAGAGAGGCC 1702
Query 1462 TGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGA--------------- 1520
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGATGGAGTTTTGCTCTT 1776
Query 1521 GATG----GG------------GGCAACA--------------------------------------------- 1533
|.|| || ||||.||
Sbjct 1777 GTTGCCCAGGCGAGAGTGTAATGGCACCATCTCAGCTCACTGCGACCTGCGCCTCCCACGCTCAAGCGATCCTC 1850
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 1851 CCACCTCAGCCTCCCAAAGTGCTGGCATGACACGTGTGCATCACCATGCTCAGCTAATTTTTTTGCATCTTTTT 1924
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 1925 GTAGAGATGGGGGTTTCACCCTGTTGCCCAGGCTAGTCTCAAATTCCTGGACTGAAGCTATCTACCCGCCTTAG 1998
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 1999 TCTCCCAAAGTGCTAGGATTACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAG 2072
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2073 CAAGATCACTTGAGCCCAGGAGTTTAAGACCAGCCTGGGCAACATAGCAAGACCCTGTCTCTAAAGAAAAAAAA 2146
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2147 AAAGTAAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAACATCTGAGCAACATC 2220
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2221 ATCAGACATCTGTCCCCCTCCATCTCTCCCATGAGTTGACTTCGCTATTGTGGGGCTTTGCCCACCTGGGGGTA 2294
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2295 AGATGACCTCTATTGCATAGCAACCCCAGGGGAAAGTGCTTCTCCTTAAATAGTTCCAGCTGAAGTCCCAGGGT 2368
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2369 AGGCTCTCCCTGGCCCAGCTGAGATCCTGTGCCATGCAGAATAAATCGCTGTGATGTGGGAGGGAAAGTGCTTT 2442
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2443 TGTTGGCCAGCCTGGGTCATGTACCCACCCTGGAGTACACGGGCTAAGAACAGAGTGGGGTGGGTCCCCAGGGG 2516
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2517 AAAATCAGGGTGCTGTTTTCAGAAGAGGGGGGTGGATGTCGGATCAACAAAACAACCAGAGGATGAGGAGCTGG 2590
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2591 ACCCTGCTTTGCCCTGGGGTGGGATGTTCTGGGGTCTCAAGGTGATTGTACCATGGGAGAGACAATCCCTTCCA 2664
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2665 ATTACGGCTGCCTGGCCCCTCTCCGTCAGTGCATCTCTCTTCCCACAGTTCCCAAGTCCCTGCCCTCTGCTGGT 2738
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2739 TCTCCTCCCACCTCTCTGGCCACTCCTCTATCTCCTTCCAAGGCTCCTCTTTTTCCCTCTGTCCCCTGAAGGTA 2812
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2813 GGTACTTCTCCAAGCTCTGTCCCTGAGGTTCTTCCCTCCATACATTTGCTTCCAAGTGAATTTGCATAAGCAGT 2886
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2887 GCTCAGACTGCACCCTGTTTTGATCCAAAACCGTCCTGACTCCCCATTGCCTATGAAGGAAGTCCATAGCCTGA 2960
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 2961 GCATTGCCTTCAAGCCCCTCAGGGCCAGGCCTCTTGCCTCCCTATCCCACCTACTTCCAGTCTGAATTCTCCAT 3034
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 3035 TCCAGCTTGTCCTGAGCCCTCCTGAACCCCATTTTCAGACTGGGGGCCAAGGCCTGCAGCTGAGCCTCTTTCTT 3108
Query 1534 -------------------------------------------------------------------------- 1533
Sbjct 3109 CTTCATAGCAGGGGGCGTGGGCCCGGTACAGAAGTTTGTCACCTGGAGACTGAGACGTGACCAGGAGAGGGGCC 3182
Query 1534 ---------------------------------- 1533
Sbjct 3183 GGGCCCTGCTGTCTGCCAGGTCTGGGAGTCCCTC 3216
