Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14299
- Subject:
- XM_011532305.3
- Aligned Length:
- 3048
- Identities:
- 1666
- Gaps:
- 1380
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCACCCCGATGCGACCGACAGTGGCGGCGCCGGCCCCAGCCCCGCGCGGGCCGCAGGCGCCGGCGGCCGTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTCTCGGGCTTCAGGGGCGAGCGGCGGCCGGAGTCCCCGGGGGACGCGGAGGCAGCAGCAGCGGCGGCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCCCCGGGCGGCCGGAGCTGGTGGAAGCCCGTGGCGGTGGCCGCACTCGCCGCCGTGGCCCTCTCCTTCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCCCGGCAGCGGGGAGGCGGCGGGGGCCGCGGGGCTGAGCTCCGTCCTGTTCAGGCTCAGCCTGTACCTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCGCGGCGGCCGCCTTCCTGCTGGGGATCCTGTTTGCCCTCGTCTGCCGGAGCCCGCGCGCCCAGCCGCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTCGCCGCCGCCTGGAGCCGGCTGGCCGCGACCTCAGCCGCCCGCCGCCCGCCGGGGAGTCCTGTGTATGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTCACATGAGTCAGCTCAGTCTAGAAGGGTAGTAATTTCTCATAATATGGATAAAGCTCTGAAAGAAGTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGACTACAGTTATAGAGATTACATTCTGTCCTGGTATGGAAACCTCAGCAGAGATGAGGGACAACTTTACCATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTCTTGGAAGACTTTTGGGAAATTGCCAGACAGCTGCACCACAGACTGAGTCACGTGGATGTGGTTAAAGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTGCAATGATGTTGTGAGGACTTTACTCACTCATTTCTGTGACCTGAAAGCTGCCAATGCCAGACATGAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCCAAGACCTTTTGTGTTGCACGCATGCTTGAGGAACTCAGATGATGAAGTAAGATTTCTACAAACGTGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCGGGTTCTGGTGTTTTGTCTCCTCCCCTCAAAGGATGTGCAGTCTCTCAGCTTACGTATAATGCTTGCAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTCTCACAACAAAAGTCTTGAAGCCGGTAGTGGAGTTACTGAGTAATCCAGATTACATTAACCAAATGCTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCCAGCTGGCGTACAGAGAGCAAATGAATGAGCATCACAAGAGAGCCTACACCTATGCCCCCTCTTACGAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTCATCAAGCTCATTAACAGCAACTCTGATGTGGAGTTCTTGAAGCAACTAAGGTATCAAATTGTAGTGGAA 1110
Query 1 ---------------------------------------------------------------------ATGAA 5
|||||
Sbjct 1111 ATAATCCAGGCGACTACAATTAGCAGCTTTCCCCAACTGAAGAGGCACAAAGGTAAAGAAACTGCGGCAATGAA 1184
Query 6 AGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTGTGAGA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTGTGAGA 1258
Query 80 AGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAGGGCCT 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAGGGCCT 1332
Query 154 CAAAGCCAGA------------------------------------AGATTCTTCAGTTTGAAGATATCTTGGC 191
|||||||||| ||||||||||||||||||||||||||||
Sbjct 1333 CAAAGCCAGAAGCAGAAGCTACAGATAGAAGGTTCAATATCTCCACAGATTCTTCAGTTTGAAGATATCTTGGC 1406
Query 192 CAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGG 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGG 1480
Query 266 AATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTC 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTC 1554
Query 340 TTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAA 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAA 1628
Query 414 AGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGACAGGTATTACCCTTCATTTA 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1629 AGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGATAGGTATTACCCTTCATTTA 1702
Query 488 TTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAG 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAG 1776
Query 562 GATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAGC 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAGC 1850
Query 636 CAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTC 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTC 1924
Query 710 AAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGC 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGC 1998
Query 784 ACAGACCTTCAGCTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCAC 857
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ACAGACCTTCAGCTGCACATGGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCAC 2072
Query 858 CAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTG 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTG 2146
Query 932 GAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGT 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGT 2220
Query 1006 GAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAA 2294
Query 1080 GTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTAC--------------------------------- 1120
|||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTACAGAATCTGCTTTCAGATGAAAGACTGTGTCAGA 2368
Query 1121 -------------------------------------------------------------------------- 1120
Sbjct 2369 GTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCTGACTACCTCAAGGTTATCGACGTGCAGGGGAAAAAAAAT 2442
Query 1121 ----------------------------------------------------------AGGAGGAGACAGAGGA 1136
||||||||||||||||
Sbjct 2443 TCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCTCGCGACTTCTTCTCCCACCAGGAGGAGGAGACAGAGGA 2516
Query 1137 GGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGT 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGT 2590
Query 1211 TGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTC 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTC 2664
Query 1285 ACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTA 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTA 2738
Query 1359 CTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAG 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAG 2812
Query 1433 AGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTT 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTT 2886
Query 1507 GTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCA 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCA 2960
Query 1581 TCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTA 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTA 3034
Query 1655 AAGCTGGCCAAGTT 1668
||||||||||||||
Sbjct 3035 AAGCTGGCCAAGTT 3048
