Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14299
- Subject:
- XR_938776.2
- Aligned Length:
- 3392
- Identities:
- 1259
- Gaps:
- 2131
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGCTGGCCAGGCTTCAGTCACAACACGGTGGGGCTCCCTGGCTGCGCCCGGCCCGGCAGCTACGGGCCCAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGTGGCGGCGCTGAGGGGTCGCCGAGAGGGGCCCGGCGGCGTCTGCGGGGGCCGCTCCCTCGGTGGGCCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCGAGGCATGAGCGCGGGCTCCCCCTGCCTCCGGAGCGCCGGCGGGGGACCGGGGGGCAGGAGATGTGCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTTAGCGGCCCAGGAAGCAGCATGCACCCCGATGCGACCGACAGTGGCGGCGCCGGCCCCAGCCCCGCGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCGCAGGCGCCGGCGGCCGTCCTGTCTCGGGCTTCAGGGGCGAGCGGCGGCCGGAGTCCCCGGGGGACGCGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCAGCAGCAGCGGCGGCGCCGGGGGCCCCGGGCGGCCGGAGCTGGTGGAAGCCCGTGGCGGTGGCCGCACTCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGCCGTGGCCCTCTCCTTCCTGGGGCCCGGCAGCGGGGAGGCGGCGGGGGCCGCGGGGCTGAGCTCCGTCCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCAGGCTCAGCCTGTACCTGAGCTGCGCGGCGGCCGCCTTCCTGCTGGGGATCCTGTTTGCCCTCGTCTGCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGCCCGCGCGCCCAGCCGCCCGACTTCGCCGCCGCCTGGAGCCGGCTGGCCGCGACCTCAGCCGCCCGCCGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCCGGGGAGTCCTGTGTATGGAAACTCACATGAGTCAGCTCAGTCTAGAAGGGTAGTAATTTCTCATAATATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATAAAGCTCTGAAAGAAGTGTTCGACTACAGTTATAGAGATTACATTCTGTCCTGGTATGGAAACCTCAGCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGATGAGGGACAACTTTACCATCTGCTCTTGGAAGACTTTTGGGAAATTGCCAGACAGCTGCACCACAGACTGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCACGTGGATGTGGTTAAAGTTGTCTGCAATGATGTTGTGAGGACTTTACTCACTCATTTCTGTGACCTGAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTGCCAATGCCAGACATGAAGAACAGCCAAGACCTTTTGTGTTGCACGCATGCTTGAGGAACTCAGATGATGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTAAGATTTCTACAAACGTGTTCTCGGGTTCTGGTGTTTTGTCTCCTCCCCTCAAAGGATGTGCAGTCTCTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTTACGTATAATGCTTGCAGAAATTCTCACAACAAAAGTCTTGAAGCCGGTAGTGGAGTTACTGAGTAATCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GATTACATTAACCAAATGCTGCTTGCCCAGCTGGCGTACAGAGAGCAAATGAATGAGCATCACAAGAGAGCCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACCTATGCCCCCTCTTACGAGGACTTCATCAAGCTCATTAACAGCAACTCTGATGTGGAGTTCTTGAAGCAAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAAGGGAAAGCGTACAAACATCAGCCCTCCTGATTCTTGAACCGAACTCAGCACTTGCAAAGTCGTATCCTCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTGGAGAAAGAAAACCGAGTGAGTGCCAGGTATCAAATTGTAGTGGAAATAATCCAGGCGACTACAATTAGCAG 1480
Query 1 -------------------------------------------ATGAAAGCTGATCTCCTGAGGGCCAGGAACA 31
|||||||||||||||||||||||||||||||
Sbjct 1481 CTTTCCCCAACTGAAGAGGCACAAAGGTAAAGAAACTGCGGCAATGAAAGCTGATCTCCTGAGGGCCAGGAACA 1554
Query 32 TGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCT 1628
Query 106 GCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGA---------------- 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGCAGAAGCTACAGAT 1702
Query 164 --------------------AGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTG 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGAAGGTTCAATATCTCCACAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTG 1776
Query 218 GAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCT 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCT 1850
Query 292 AACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGT 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGT 1924
Query 366 GGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCC 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCC 1998
Query 440 AGGAAGATGTTTATGAGACCCTAAAGGACAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTG 513
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGGAAGATGTTTATGAGACCCTAAAGGATAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTG 2072
Query 514 TTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGC 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGC 2146
Query 588 TGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAG 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAG 2220
Query 662 AACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAG 735
||||||||||||||||||||||||| |||
Sbjct 2221 AACTAAATGAGAAACTTGAATATAA----------------------------------------------AAG 2248
Query 736 ATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATAGCAAG 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 2249 ATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATGGCAAG 2322
Query 810 AACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATG 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2323 AACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATG 2396
Query 884 GTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACG 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2397 GTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACG 2470
Query 958 GTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGT 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2471 GTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGT 2544
Query 1032 CCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAAT 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2545 CCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAAT 2618
Query 1106 TAAATAAGTTTTTAC----------------------------------------------------------- 1120
|||||||||||||||
Sbjct 2619 TAAATAAGTTTTTACAGAATCTGCTTTCAGATGAAAGACTGTGTCAGAGTGAAGCACTTTATGCCTTCTTGAGC 2692
Query 1121 -------------------------------------------------------------------------- 1120
Sbjct 2693 CCTTCTCCTGACTACCTCAAGGTTATCGACGTGCAGGGGAAAAAAAATTCTTTTTCATTATCCTCATTTTTGGA 2766
Query 1121 --------------------------------AGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTG 1162
||||||||||||||||||||||||||||||||||||||||||
Sbjct 2767 AAGACTTCCTCGCGACTTCTTCTCCCACCAGGAGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTG 2840
Query 1163 ATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGA 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2841 ATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGA 2914
Query 1237 GGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACA 1310
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2915 GGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAA--- 2985
Query 1311 AATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTT 1384
Sbjct 2986 -------------------------------------------------------------------------- 2985
Query 1385 TTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGA 1458
Sbjct 2986 -------------------------------------------------------------------------- 2985
Query 1459 GCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGG 1532
Sbjct 2986 -------------------------------------------------------------------------- 2985
Query 1533 TATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGCGCTGATGGAACTGC 1606
Sbjct 2986 -------------------------------------------------------------------------- 2985
Query 1607 TGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT 1668
Sbjct 2986 -------------------------------------------------------------- 2985
