Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14312
- Subject:
- NM_001286547.3
- Aligned Length:
- 1596
- Identities:
- 439
- Gaps:
- 1155
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAAAGGAGTTGCTGCCACTTCTAGGAGCCAAATTCAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGACTCTGATGATGAGGATCAGAACATAATACCTGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATGGTAGGATCGTATCACGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTT 962
Query 1 ----------------------ATGGAACAGGAGGATAATATAATCATTCAAGAAACCAATGATAGGCTGGTCT 52
|||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 963 GGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCT 1036
Query 53 TCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAA 1110
Query 127 TATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTT 1184
Query 201 TCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTG 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTG 1258
Query 275 ATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTT 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTT 1332
Query 349 ATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCA 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCA 1406
Query 423 TTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCT 496
||||||||||||||||||.
Sbjct 1407 TTCTCAAGTAATTTCAGGT------------------------------------------------------- 1425
Query 497 GCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGAT 570
Sbjct 1426 -------------------------------------------------------------------------- 1425
Query 571 GATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATT 612
Sbjct 1426 ------------------------------------------ 1425
