Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14312
- Subject:
- NR_149155.2
- Aligned Length:
- 4235
- Identities:
- 611
- Gaps:
- 3623
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCTGCAGAGTGAAGAAAGCTGGTAATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATCAGAACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGTAAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCAGCATTTTTACTTATTTGGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGGTGCAACCTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCAC 666
Query 1 -------------------------------------------ATGGAACAGGAGGATAATATAATCATTCAAG 31
|||||||||||||||.|||||||||||||||
Sbjct 667 AAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAG 740
Query 32 AAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGT 814
Query 106 ATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTT 888
Query 180 TAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATG 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATG 962
Query 254 ACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAA 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAA 1036
Query 328 TCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAA 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAA 1110
Query 402 ATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTC 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTC 1184
Query 476 TAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGT 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGT 1258
Query 550 TTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATT----------- 612
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATTTAGTCTTTAAT 1332
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1333 AATACATATGTCATCAACACTAAGCATTTTATTGGAGAGATGATATCAATGTAAAGGATGATCAAACACTGGAA 1406
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1407 TATATTTTCCTAGGACTTCCTTTATTCTGGTTTCTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTCTCAAAAATG 1480
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1481 TTGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGTGTATGCCTGT 1554
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1555 TCACATGTCCTTACATTTGTAAAGATATCTTTTTGGTTTATTACTTATCTTGCGTATATTTTAGAGGTCATTTT 1628
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1629 TTATTAACTTCAGTAGGAAAGTTACATCTGCATCAAACAATATGGCAACATCTATTTATTAACCAAGTTTCCTG 1702
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1703 TCCTTTCACATTGTTTTTTGCTACCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAAT 1776
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1777 TGGGCCCAAAGCCAGTGAGATAATTCAATGTGTTTTTAACACATGAAAATATTAAAGGATATGCAAGAGAAATT 1850
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1851 TTTCAAGCAGTGTGATTATAGATGTTTTCTGTATATAGAATATTTCAAATGATGGAGGTTTACCCCATGATGCT 1924
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1925 CATTTAAATACTGACTTGTCTTTTAAATCTGTCTTCTAAATTATGTACTGTTGTTGGTTAAATAGAGCACAATG 1998
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1999 TAGTTATTCTAATGCCCAGTTGTATTTGTTCTTTTATTCTGCTTTTTAACTGTAATCCTTTTTACCAGCATACG 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 ATTGTTATTGAGCAATATGAAAGGGAAATGTTCTTTATTAAAATCAATACATTATCTTATTAAACAAAGATCCT 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 AAAAGTATATTGTTGCATATATGAATCCAAGGAATAGTTCAGTAATTATTGCCTAAAATGTGAAAGCATATTTT 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 GTATCCTAAAATGAATGTATGATATTCTAAACATCTGTTTTAGTATAACAAACAATTGAAACATTTCCTTCTAA 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 ATATATGTTATTTAATAGTTACATGTATTATAATCATTCTTTCTAAATTCTTTGCTAGTCATTTCTTCCTGGGA 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 ATACAGAGAAAAGAGACAACTTTATGAGTTGTTTTCAACTTCATAATTTTAAATTTTCTATGTTAATATAACAT 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 AAATTAGAAAAAATAAGTGATTCAAAATGAAAATATTTACTTTGTAGAATATGACTTTAGACATATCACTGTAT 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 CCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCCAACAAATTCAAAGTTGCACTTTTCAAG 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 ATGTGAGAAGGTACTAAAACTTAATACTAAAACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCA 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 CTGGCTAAATTCTTTATTTCTTGATTTTTTTAAAAATTAGGTTATTAAAATTAAAACAATATGCTAGAAGACAT 2738
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2739 TTTGGCAGAAATAAGTCTATAACACTATTTTTGTCACATATCTTTTTCTTGGAAAAATTTATCCAACTATAGAC 2812
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2813 ATCTTAAACCCTACAAATTGTTCTTGTTAAAAATGACTAATACTGGGGGTGCTCAATATGCATATAGTGTTTTT 2886
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2887 CATTGATAATTTTTATTTAGTTCTTAAGAAACCTGTTCTTAATGTTGGCATGTCACATTTTTCTGTTACTATAA 2960
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2961 TCAGAAAATGTATAGTCTGTTATACTGTAAAAAAAAAAAAAAAGGGAAGCTACTTTTGGAATGTAACGTGTTAA 3034
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3035 CATGACAGCATACTCTTAGTATTAATCTTAATCTTCCTAACATAAGCATTCACATGTGGTTATTTGTAGGAAAT 3108
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3109 AGCTCTATTTATGAGATTTTTTTTGGTGTATTTTGTTAGAATTGGTGACACAGTAAATCATTCTGCTTTTGGAT 3182
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3183 TTGCCTGACTGCCTGCATTCTTCTTTGATTTTGGTATAGTAAAATCTGTTATTTAGTGTTAAACTTAATAAAAG 3256
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3257 AGCATTTAAGAGAAGTGACATTTCAAACATCCACAACACAACTGACTTTTGAAATCCTATGCTTAATAGTCTTT 3330
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3331 GTAATTCTAAAAGACCTTTTGAAAATGTTAAAATATTAAATTATATGTTGTAATGCTGTTACATGAATTTTATA 3404
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3405 GTTATGTATATTTTATAGATCTCTATGTCTTTGTAAGTTACTTGCTTGTATGCTATATAATTGCTTTCTCAGTT 3478
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3479 AACCATACTGTTTATGGAATTGTATATACTGATTTTTCTGTTTTTATATTTTAAAAATAAAAGTTGAGAATTTT 3552
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3553 AAGGAAAAACATTTTATTAAAAAGACAAGGTATATTATATAGGAATTTTAAGCTAACTTTTAATGGAAAGGACA 3626
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3627 TACATATTTGCATGATGGAGCAATCACATTATAGTTAAACATGTATGTCCCTGTTTTAAATTTTATAGTATATA 3700
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3701 AATATATGTGCTAATGAACCAGCGACTCTGCATAGAGGCAGTCACTTAGAGTAATTAATAATCTTGATACAGCT 3774
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3775 GTAGATCATATCTTATTTTACATATTACTTTTGACTTCCAGTTTAAGTTGTTTGTTATCAAGTATTTCAGGAGA 3848
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3849 GAATTGTGTACATTAGGCTATGTTTACTGCAGATTATGTAACATGCTTTTATGAGATTATAGTTTGTAGTGCTT 3922
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3923 GCAAATATAAAACATGTACCCTGATAAACTATAATCACTACTAGGTTGACCAGCAAGGACAAACATGAAAATGC 3996
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3997 TTAAAAAAAAGAAAGCGCTTAAAACAAAGAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAA 4070
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4071 GAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGCTCTTGTCATACATA 4144
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4145 TCGTTCCATTTTTATTTTAAAGTTCTATAAACTTCTGAGGTAAACTGATTTCTTGGATGTACTTAATAAAGAAT 4218
Query 613 ----------------- 612
Sbjct 4219 AAATGTTTCATATTGGA 4235
