Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14312
- Subject:
- NR_149159.2
- Aligned Length:
- 4611
- Identities:
- 611
- Gaps:
- 3999
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCTGCAGAGTGAAGAAAGCTGGTAATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATGCAAAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGTGGGCAACATCCAATCGGCTGCCAGCTAGAATAAACCAGGCAGGAGAAGATGGAAGAGCCGACTTGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATCTTCCAGCCTTCATCTTTCTCGTGTGCTGGATGCTTCCTGCCCTCAAACATCAGACTCCAGGTTCTTCGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTGGACTCTCGGATTTACATCAGTGGTTTACCAGGTGCTCTCAGGCCTTCAGCCACACACTGAAGGCTGAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCGGCTTCCCGACTTTTGAGATTTTGAAACTTGGACTGAGCTACTGCTGGCTTCCTTGCTTCTCAACTTACA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGGGACTTCACCTATAGATCATGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGGTGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCG 1036
Query 1 -------------------------------------------------ATGGAACAGGAGGATAATATAATCA 25
|||||||||||||||.|||||||||
Sbjct 1037 AATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCA 1110
Query 26 TTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGT 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGT 1184
Query 100 GTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGC 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGC 1258
Query 174 AGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTC 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTC 1332
Query 248 TGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATAC 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATAC 1406
Query 322 AGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACAT 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACAT 1480
Query 396 AAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCAT 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCAT 1554
Query 470 CCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTAT 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTAT 1628
Query 544 GAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATT----- 612
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATTTAGTC 1702
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1703 TTTAATAATACATATGTCATCAACACTAAGCATTTTATTGGAGAGATGATATCAATGTAAAGGATGATCAAACA 1776
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1777 CTGGAATATATTTTCCTAGGACTTCCTTTATTCTGGTTTCTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTCTCA 1850
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1851 AAAATGTTGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGTGTAT 1924
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1925 GCCTGTTCACATGTCCTTACATTTGTAAAGATATCTTTTTGGTTTATTACTTATCTTGCGTATATTTTAGAGGT 1998
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1999 CATTTTTTATTAACTTCAGTAGGAAAGTTACATCTGCATCAAACAATATGGCAACATCTATTTATTAACCAAGT 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 TTCCTGTCCTTTCACATTGTTTTTTGCTACCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAAT 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 TAGAATTGGGCCCAAAGCCAGTGAGATAATTCAATGTGTTTTTAACACATGAAAATATTAAAGGATATGCAAGA 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 GAAATTTTTCAAGCAGTGTGATTATAGATGTTTTCTGTATATAGAATATTTCAAATGATGGAGGTTTACCCCAT 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 GATGCTCATTTAAATACTGACTTGTCTTTTAAATCTGTCTTCTAAATTATGTACTGTTGTTGGTTAAATAGAGC 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 ACAATGTAGTTATTCTAATGCCCAGTTGTATTTGTTCTTTTATTCTGCTTTTTAACTGTAATCCTTTTTACCAG 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 CATACGATTGTTATTGAGCAATATGAAAGGGAAATGTTCTTTATTAAAATCAATACATTATCTTATTAAACAAA 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 GATCCTAAAAGTATATTGTTGCATATATGAATCCAAGGAATAGTTCAGTAATTATTGCCTAAAATGTGAAAGCA 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 TATTTTGTATCCTAAAATGAATGTATGATATTCTAAACATCTGTTTTAGTATAACAAACAATTGAAACATTTCC 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 TTCTAAATATATGTTATTTAATAGTTACATGTATTATAATCATTCTTTCTAAATTCTTTGCTAGTCATTTCTTC 2738
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2739 CTGGGAATACAGAGAAAAGAGACAACTTTATGAGTTGTTTTCAACTTCATAATTTTAAATTTTCTATGTTAATA 2812
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2813 TAACATAAATTAGAAAAAATAAGTGATTCAAAATGAAAATATTTACTTTGTAGAATATGACTTTAGACATATCA 2886
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2887 CTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCCAACAAATTCAAAGTTGCACTT 2960
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2961 TTCAAGATGTGAGAAGGTACTAAAACTTAATACTAAAACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTA 3034
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3035 TTTTCACTGGCTAAATTCTTTATTTCTTGATTTTTTTAAAAATTAGGTTATTAAAATTAAAACAATATGCTAGA 3108
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3109 AGACATTTTGGCAGAAATAAGTCTATAACACTATTTTTGTCACATATCTTTTTCTTGGAAAAATTTATCCAACT 3182
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3183 ATAGACATCTTAAACCCTACAAATTGTTCTTGTTAAAAATGACTAATACTGGGGGTGCTCAATATGCATATAGT 3256
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3257 GTTTTTCATTGATAATTTTTATTTAGTTCTTAAGAAACCTGTTCTTAATGTTGGCATGTCACATTTTTCTGTTA 3330
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3331 CTATAATCAGAAAATGTATAGTCTGTTATACTGTAAAAAAAAAAAAAAAGGGAAGCTACTTTTGGAATGTAACG 3404
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3405 TGTTAACATGACAGCATACTCTTAGTATTAATCTTAATCTTCCTAACATAAGCATTCACATGTGGTTATTTGTA 3478
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3479 GGAAATAGCTCTATTTATGAGATTTTTTTTGGTGTATTTTGTTAGAATTGGTGACACAGTAAATCATTCTGCTT 3552
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3553 TTGGATTTGCCTGACTGCCTGCATTCTTCTTTGATTTTGGTATAGTAAAATCTGTTATTTAGTGTTAAACTTAA 3626
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3627 TAAAAGAGCATTTAAGAGAAGTGACATTTCAAACATCCACAACACAACTGACTTTTGAAATCCTATGCTTAATA 3700
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3701 GTCTTTGTAATTCTAAAAGACCTTTTGAAAATGTTAAAATATTAAATTATATGTTGTAATGCTGTTACATGAAT 3774
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3775 TTTATAGTTATGTATATTTTATAGATCTCTATGTCTTTGTAAGTTACTTGCTTGTATGCTATATAATTGCTTTC 3848
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3849 TCAGTTAACCATACTGTTTATGGAATTGTATATACTGATTTTTCTGTTTTTATATTTTAAAAATAAAAGTTGAG 3922
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3923 AATTTTAAGGAAAAACATTTTATTAAAAAGACAAGGTATATTATATAGGAATTTTAAGCTAACTTTTAATGGAA 3996
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3997 AGGACATACATATTTGCATGATGGAGCAATCACATTATAGTTAAACATGTATGTCCCTGTTTTAAATTTTATAG 4070
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4071 TATATAAATATATGTGCTAATGAACCAGCGACTCTGCATAGAGGCAGTCACTTAGAGTAATTAATAATCTTGAT 4144
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4145 ACAGCTGTAGATCATATCTTATTTTACATATTACTTTTGACTTCCAGTTTAAGTTGTTTGTTATCAAGTATTTC 4218
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4219 AGGAGAGAATTGTGTACATTAGGCTATGTTTACTGCAGATTATGTAACATGCTTTTATGAGATTATAGTTTGTA 4292
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4293 GTGCTTGCAAATATAAAACATGTACCCTGATAAACTATAATCACTACTAGGTTGACCAGCAAGGACAAACATGA 4366
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4367 AAATGCTTAAAAAAAAGAAAGCGCTTAAAACAAAGAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCA 4440
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4441 AGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGCTCTTGTCA 4514
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4515 TACATATCGTTCCATTTTTATTTTAAAGTTCTATAAACTTCTGAGGTAAACTGATTTCTTGGATGTACTTAATA 4588
Query 613 ----------------------- 612
Sbjct 4589 AAGAATAAATGTTTCATATTGGA 4611
