Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14337
- Subject:
- NR_158611.1
- Aligned Length:
- 5750
- Identities:
- 1449
- Gaps:
- 4265
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAAACACTAGATTTGAATCAGTAAATACGATATGAAAAGACCCAAAAATGTGATTCTTTGCAAGACATTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATAAACTGAAATCATACCTGGGCTATCCACTGGAATATGGAACAATGCAGAAATAGACATGGCAAGTTCTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTGGTCCCCATCTGCACAGGGCTCTCCTGTGGAGCCCTCAGGCCAGTGCTTCTGCTCATTCCTCTTGCCATTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTACCTTGCTTCAGGGAACTGGCCTCTCACTGCTTTCCACGTGCAAAAGGGGCAGTCTCCTGTGTGTTTGAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCAAGTTTCCTGAGGGTAGACATTGTAAACTTAGATGACACAGACTTTCTGAAACTTGTGCTGGTTAGATCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAGGAGGTCTTGGATTTGGTTTGAGGAGCACAGGAAGGTGGGCTGGGGAACTGGAGTAGCTTGACCAGGTGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTTCTTATCCGTAAGCCTTAGACTTTTGCTACAGCTGTCTTTCTTTTTGGGTGACTTCCTTTAATGCTCTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTAAAACTGCAGGGTTTTGGAGGGAACTGCTTTGAAGTGGAGCAACATTGATCATGTGATACCTTTTTGGAGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACTTTTGACTAGGTAGTGGGCCAAGGTGCAGGAAGCCCTGGAGTGTGTGAGCTCAGCCCAGGGCTGTATCCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGCCTGTGGTCAGCTAGCTGCGTGACCTTGTCTCATTTCTTTGGCCTTCAGTTTTTCTTTCTGTAAAATAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGTTGGATTAATTTGCGTCCATCTTCCAAAAAAGCTTTTTCATCACAAGTTTATTTAATCGGCACTCTTAGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGTGTAAGTTAGACCCGGAAAAGGTCTTAAAGGTCATTTTCTAGGATAGTCTCATCCACTGATTTTACAAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGTTGTTAACTCCCAGCATAGTGAAGCACTTGCTTTAAGGCTGCATAATTTATGGAAAGTTGATTTTCTCCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTGATGGGGGAAGGGTAGGCCAGGCTGCGGATGAGACAGACACTTTTCGTGATGTGTGCTCCGCTTTGTCTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATCTGTCCAAGGCTTGGTCAAAGGCATTTTCTAGTGGTGATGGTTTTGTGTCTTCCCAAGGAACTGAAAGAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAATGAGATAATGAGATTACGTTCTGAACTTTGAAGCACTAAATGAAGTCAGCCTGGAGATAAAGCTTTTAATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGCATGCAGGAGTAATTTCATTGTGATAGCTGTATCACAATTTATGCTTTTTACATAATCCACAAGGCTTAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAACTGACTTATCCATGAAGTGACCAGAAAATCCTGCCATTCTCTGTCGTATATGCATATGGTTTGAATTTTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAAATGATATTGTTTTTTTTCAAAAGTCTTGATGGTGACAATTAGGCCCCAGTCATGGAGGGGAATTTTCACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGCTTATGTGTATGTAGTGTCTTGATGAGAGTGATTTAAAACCTGGCAGTCAGCATTTGGAGGACTTGTGCAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCTGTTAAGAACAAGAGGAATCTCTTTTTCTCTCAAACATTTACTACATAGAATTAGAATAGATCATTGGTAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGATGATGGGGGTGGCTGGTTTTATAGAAAAGATACCAAAATTAAACGAGCTGCAGAATGGAAAGAAGGTACT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGTTATTTCACTGTTCAGGACTTTTTTGTTTGGTGCTTTTACATATTACTAAATTTTTTCTTCTGAAGTTCCAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCAATAAATACTTAGGAATTTCACAGAATGTCTCAAGATTTGATGAGAAAGTCAACAAGAAAATATATAGTAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTCAAAGACTCCAGCCTGTTGTCACCATTTCTTTTCAAGATAAATGGAGTTTCTTAATTACAATTTTGGGGGAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGACTTAAGCAGACTGAAACAAGGTTTCAGGTGGGAGCTAACTTGATAAGATATCAACGCTTTGGATGAGATAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCAAAAGTCAGATAAAGTCACGTGGTGCACAATGACGTTTTCATCAGTGACGGACTGCATATATGACACCCAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGCATATATGATCACGTAAGATTATAACAGAGCTGAAAGATTCCTGTCACCCAGTGACAGTGGGCAGCTGTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGTGTTGTAGCCCATTGCATTACTCATGTGTTTGTGGTGATGCTGGTGTAAACAAACCTACTTTATACTTCAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAAGTAAAAACTTATAGTAAGCTAAGACCAACTTATCATTGAAGAAAGAAAAACTGTTTTTAATAAATTTGGCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAGCTTAAGTATACAGTGTTCATAAAGTCTACAGCAGTGTACGGCAACGTCCCAGCCTTCCCATTCACTCACCG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTCATTCACTGATCCACCCAGAGCAACTCCCAGTACTGCAAGCTCCATTCATGATTGCTATGCTATGCCTTGTA 2368
Query 1 ---------------------------------------------------------------------ATGAA 5
|||||
Sbjct 2369 TGACTAAGACCTCTTACCAAGAATACGTGTCAGACCATAAAACCACTGCCAAGGAGTGCGGGGGTGGCAATGAA 2442
Query 6 ACAGCCCAACAGGAAAAGGAAGCTTAATATGGATTCCAAAGAGCGTTTGGATCAGGACGGACGCTTGGAGCAAG 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ACAGCCCAACAGGAAAAGGAAGCTTAATATGGATTCCAAAGAGCGTTTGGATCAGGACGGACGCTTGGAGCAAG 2516
Query 80 CTGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCCTTTGAGTCACGTCCCTTCAGCGGCTGCACAGGGAGCA 153
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CTGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCCTTTGAGTCAC--------------------------- 2563
Query 154 TGGTCTTGGGAGTGGTACTTGAAAGAACAGAAGGCTGTCGCAGCACCTGTTGAGCTGTTTTCCAAGGATCAGTC 227
|||||||||
Sbjct 2564 -----------------------------------------------------------------GGATCAGTC 2572
Query 228 CTTTCCAGAGCATGAAAATGGTTTTCAGATTGGAATGAGATTAGAAGGCATTGATCCCCGACATCCATCGGTAT 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2573 CTTTCCAGAGCATGAAAATGGTTTTCAGATTGGAATGAGATTAGAAGGCATTGATCCCCGACATCCATCGGTAT 2646
Query 302 TCTGTGTGCTTTCTGTAGCGGAGGTTTGTGGTTACCGTCTAAGACTTCATTTTGATGGTTATTTAAGTTGCTAT 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2647 TCTGTGTGCTTTCTGTAGCGGAGGTTTGTGGTTACCGTCTAAGACTTCATTTTGATGGTTATTTAAGTTGCTAT 2720
Query 376 GATTTTTGGACCAATGCTGGTTCCCCTGACATTCATCCAGTAGGATGGTGTGAAAAGACCAAACATGAACTGCA 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2721 GATTTTTGGACCAATGCTGGTTCCCCTGACATTCATCCAGTAGGATGGTGTGAAAAGACCAAACATGAACTGCA 2794
Query 450 CATCCCTAAGGGTTATAGAAAAGATAAATTTGTTTGGATGGATTACTTGAAGGCCTGCAAATTGCAAAATGCTC 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2795 CATCCCTAAGGGTTATAGAAAAGATAAATTTGTTTGGATGGATTACTTGAAGGCCTGCAAATTGCAAAATGCTC 2868
Query 524 CAAAGAAATTATTCAGAAACAGAAGTCCTAATGGGCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGCTGGAG 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2869 CAAAGAAATTATTCAGAAACAGAAGTCCTAATGGGCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGCTGGAG 2942
Query 598 GCCGTGGACAGGAAGAACCCTTCCTTGGTGTGTGTGGCGACCATAGCAGATATTGTTGAAGATCGCTTACTAGT 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2943 GCCGTGGACAGGAAGAACCCTTCCTTGGTGTGTGTGGCGACCATAGCAGATATTGTTGAAGATCGCTTACTAGT 3016
Query 672 GCATTTTGACAACTGGGATGATAGTTACGATTACTGGTGCGATGTTAATAGCCCTTATGTCCAGCCAGTTGGTT 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3017 GCATTTTGACAACTGGGATGATAGTTACGATTACTGGTGCGATGTTAATAGCCCTTATGTCCAGCCAGTTGGTT 3090
Query 746 GGTGTCAGGAGAATGGAAGAACTCTGATAGCACCCCAAGGTTATCCCAATCCAGAAAATTTTTCCTGGACAGAA 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 GGTGTCAGGAGAATGGAAGAACTCTGATAGCACCCCAAGGTTATCCCAATCCAGAAAATTTTTCCTGGACAGAA 3164
Query 820 TACCTGGAAGCTACTCAAACCAATGCAGTTCCTGCCAAAGTTTTTAAAATGAGGTTGCCTCATGGTTTTCTGCC 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165 TACCTGGAAGCTACTCAAACCAATGCAGTTCCTGCCAAAGTTTTTAAAATGAGGTTGCCTCATGGTTTTCTGCC 3238
Query 894 AAATATGAAACTTGAAGTTGTGGATAAACGGAACCCCAGGTTAATTCGTGTTGCTACGATTGTAGATGTTGATG 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 AAATATGAAACTTGAAGTTGTGGATAAACGGAACCCCAGGTTAATTCGTGTTGCTACGATTGTAGATGTTGATG 3312
Query 968 ACCAAAGAGTAAAGGTTCATTTTGATGGTTGGGACCATAAGTATGACTACTGGGTGGAGGCAGACAGCCCTGAT 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313 ACCAAAGAGTAAAGGTTCATTTTGATGGTTGGGACCATAAGTATGACTACTGGGTGGAGGCAGACAGCCCTGAT 3386
Query 1042 ATCCACCCGATCGGATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCCACAGCGAACGAATGACCTGAAGAT 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3387 ATCCACCCGATCGGATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCCACAGCGAACGAATGACCTGAAGAT 3460
Query 1116 CCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACGTTATTCGG 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3461 CCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACGTTATTCGG 3534
Query 1190 GACATCACAGTGCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATCGTTTG 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3535 GACATCACAGTGCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATCGTTTG 3608
Query 1264 AGAGAACAAACACAGGCAAATTTGGAATCAGACTCTTCACATTCAAAATCAAAAAGCCTCTGTAGTTTGAACTT 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3609 AGAGAACAAACACAGGCAAATTTGGAATCAGACTCTTCACATTCAAAATCAAAAAGCCTCTGTAGTTTGAACTT 3682
Query 1338 CAATGGAAAACATGAAAAGGTGAACAGTCAGCCCAGACT------TGTA-------CAGCAGG----------- 1387
|||||||||||||||||||||||||||||||||||||.| ||.| |||||||
Sbjct 3683 CAATGGAAAACATGAAAAGGTGAACAGTCAGCCCAGAATACTCGGTGGAGCAGGCGCAGCAGGTGCTTCACCAG 3756
Query 1388 --------------CAAAGTGT----------TT-----------------------GAAAATCA----AAG-- 1408
||..|||| || ||..|.|| |||
Sbjct 3757 TCAGTGTCCATGTCCACGGTGTCAGCCCACCCTTTTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTT 3830
Query 1409 ----------------GAAA--------AG--AAG----ATATT-GACT-TGGAT------------------- 1431
||.| || ||| |..|| |||| |||||
Sbjct 3831 GCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTTTGTAC 3904
Query 1432 AATCTCTTC----------AGAG---GCCGAGTG------------------CGGTGGC-------TCATGCCT 1467
|.||||||| |||| |||.|||| ||.|||| ||.|||.|
Sbjct 3905 AGTCTCTTCTGGGCTGTGAAGAGCATGCCAAGTGCTTTAAGAAAGAGCAGATCGATGGCAAAGCCTTCCTGCTT 3978
Query 1468 ------------------------GTAAT---------------CCCAGCACT-----TT-------------- 1483
||.|| ||||||||| ||
Sbjct 3979 CTGACACAGACGGACATTGTCAAAGTGATGAAGATCAAACTGGGCCCAGCACTGAAGATTTACAACTCTATCCT 4052
Query 1484 --------GGGAGGCCGAGG------------------------CAGGCAGATCACGAGATCAGGAGATCAA-- 1523
||.|..||.||| ||||| ||.||..|||||.|||.||
Sbjct 4053 GATGTTCAGGCATTCCCAGGAACTCCCTGAAGAAGATATTGCCTCAGGC----CAAGAAGTCAGGGGATGAATG 4122
Query 1524 --------GACCATC--CTGGCCAACGCAGTGAAACC-CCGTCTCTACCAAAAATACAAAA------------A 1574
||.|.|| ||||| ||..|| ||| .|| ||||..||..||| |||| |
Sbjct 4123 GGCTCCCTGAACTTCCTCTGGC--ACCAAG----ACCTGCG-CTCTTTCAGCAAT--AAAAGTGGAGCACATTA 4187
Query 1575 ATTAG------------CCAGGCGTGGTGGCGGGCGCCTA---------------------------------- 1602
|||.| ||| |||| |.||
Sbjct 4188 ATTTGATGTGAATGTCCCCA-------TGGC-----CGTATCCACACTGAATCTGGACTTTTTAAAGTGTCTGT 4249
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4250 GATTTGTTTACATGTTTAGAGGATTTTGATGACTGGTCCAGTGCCAATGACTCAGAGGCTTAGGCCCATCTGTG 4323
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4324 GGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAGACCAAAGA 4397
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4398 AGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTTCCATCTTACAAGCATAACACTC 4471
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4472 TCAAGTGGTGAAATATTAGAAAAGCAGTGTTCATGAATACATCGTTAATGTTTTTACCAGAGCAACATCGAGCT 4545
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4546 TGGCTCAGATCTGCCATGGAGCACAGCTAGTCTAAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAG 4619
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4620 ATTTTTGTGTACTTTACTCAGGAAAGTGTGAATCTCTAAAAAATAATAATAATAAGCACATGTTTTCATGATTC 4693
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4694 ATTAATTCTCCTTTTTGTTCCATTAACCATTTCTTGGTTGTGCTCCCAAGCTTTCCTGGAGCCTCCACAAAGGA 4767
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4768 GAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGGAGAGACCCTTCTGAGGACCCTC 4841
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4842 CACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCTGGGCCAGACGCTCACCTGCACAG 4915
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4916 AACTCCTCCCTGCTCCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCTGCCAGAACCCCTG 4989
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 4990 TAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGA 5063
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 5064 AGATCTCTAAAGTAGGGAGCGTGGTACTTATTCTTTGTTTGAAACATTCCGATTTGTTGTCAGGCCTTATTTGT 5137
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 5138 TTTTTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAAGACAAGTACCTCT 5211
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 5212 TTTCTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATT 5285
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 5286 TGTGGGTGGGGAGAAAGAGGGAGAGGTTCTATGTCCACTTGCTTCATTAAGAATGTTAAGGTTTAAGAAAGTTG 5359
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 5360 ATTCTGCTTGGAGAATTTCTCAAGCTTTACATTTTTTTTTCACTGAAGAAAATAAACAAACTCTAAGAGGTGTG 5433
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 5434 CATATATAACATTTCTTTAGATCTTTACCTAAAAGGAATTTTAATATATTATTGGTTGATGTAAATTTTGTTTC 5507
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 5508 TGTGGAGTTTTGTTTGTTTTGCTTTTTGTAGACTGCCATGTGCAAGTAAAATTCCTGCTTCTGCCATGTTAAAA 5581
Query 1603 ---------------------------------------------------- 1602
Sbjct 5582 TTTTAATATATTTTAAATGATAATAAACAGAGAAAACAAAATTTATACCTCA 5633
