Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14356
- Subject:
- NM_001033633.3
- Aligned Length:
- 1951
- Identities:
- 1585
- Gaps:
- 104
Alignment
Query 1 ---------------------------------------------------------ATGGGCGAGCGGCGCAG 17
|||||||||.|||||.|
Sbjct 1 ATGTCCCGCAAGGCGAGCGAGGACGTGGAGTACACGCTGCGCAGCCTGAGCAGCCTGATGGGCGAGAGGCGCCG 74
Query 18 GAAGCAGCCGGAGCCGGACGCGGCGAGCGC--GGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCAC 89
...|||||||||||||| |.|||| || |||||||.||||||||||| ||||||||.|||..|.|
Sbjct 75 CCGGCAGCCGGAGCCGG-------GGGCGCCAGG-CGGGGAGCGCAGCCTCCTG---GCCGCCGAGTCGGCCGC 137
Query 90 CAGCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGC 163
||||||||||.|||| |||.|||||||||||||||||..||||||||||||
Sbjct 138 CAGCCTGCAGGGCGC------------------------GGAGCTGGAGCGCGCGGCGCGCAGGCAGTTCCAGC 187
Query 164 AGGACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGAC 237
..|||||||||||.|||||||||||||.||..||||.||||||.|||||.||||||||||||||.|||||.|||
Sbjct 188 GCGACGAGACCCCGGCCTTCGTGTACGCGGCCGCCGCCTTCTCGGCGCTCGGCGGCTTCCTGTTCGGCTACGAC 261
Query 238 ACCGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAGGAGCTGCT 311
|||||.||||||||.|||||||||||||||||...|||.|||.|..|.||||.||||.||||||||||||||||
Sbjct 262 ACCGGCGTGGTGTCGGGGGCCATGCTGCTGCTGCGGCGCCAGATGCGCCTGGGCGCGATGTGGCAGGAGCTGCT 335
Query 312 GGTGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCC 385
||||||..||.|||||||.|||||.||||||.||||||||||||||||.|||||.|||||||.|.||||.||.|
Sbjct 336 GGTGTCGGGCGCGGTGGGCGCGGCCGCCGTCGCGGCGCTGGCCGGAGGGGCCCTGAACGGCGCCCTCGGTCGGC 409
Query 386 GC-GCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGA 458
|| || ||||||||.||||||||.|||||.|.|||||..||||||||.||||||||.||.|||..|||||||||
Sbjct 410 GCAGC-GCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACAAGGA 482
Query 459 GACACTGCTCGCCGGCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTG 532
|||.|||||.||||||||||||||||||||.||||||||||||||.||.||.|||||.|||||.||||||||.|
Sbjct 483 GACGCTGCTGGCCGGCCGCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCG 556
Query 533 CGGAGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTC 606
|||||||.||.||||||||..|.|||||.||..|.||||||||.||.|||||||||||||||||.||.||||||
Sbjct 557 CGGAGGTTTCTCCACCCAACCTGAGAGGTCGCCTGGTCACCATCAACACCCTCTTCATCACAGGCGGACAGTTC 630
Query 607 TTTGCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCAGC 680
||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||||||||.||
Sbjct 631 TTTGCAAGTGTTGTCGATGGCGCCTTCAGTTACCTGCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCGGC 704
Query 681 AGTTCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGAC 754
..||||.||.||||||||||||.||||.||.|||||||||||.|||||||||||.|||||.||||||||.||||
Sbjct 705 CATTCCAGCTGTTATACAGTTTCTTGGATTCCTCTTTTTGCCCGAAAGCCCTCGGTGGCTGATTCAGAAGGGAC 778
Query 755 AGACTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATC 828
||||||||||||||||..|||||||.||.|||||||||||.||.|||||||||||||||||.|||||.||||||
Sbjct 779 AGACTCAGAAGGCCCGCCGAATTTTGTCCCAGATGCGTGGCAATCAGACCATTGATGAGGAGTATGACAGCATC 852
Query 829 AAAAACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGCTGGACCTGTGATCTGCAGAATGCTGAGTTATCC 902
|..||||..||.||.|||||||||||.||.|....|.|||||||||||.|.||||||||||||||||||||.||
Sbjct 853 AGGAACAGTATCGAGGAGGAGGAAAAGGAAGCCACCGCAGCTGGACCTATAATCTGCAGAATGCTGAGTTACCC 926
Query 903 CCCAACTCGCCGAGCTTTAATTGTGGGTTGTGGCCTACAAATGTTCCAGCAGCTCTCAGGCATTAACACCATCA 976
|||||||||||||||.|||.|||||||.||||||.||||.|||||||||||.|||||.|||||.|||||.||||
Sbjct 927 CCCAACTCGCCGAGCGTTAGTTGTGGGATGTGGCTTACAGATGTTCCAGCAACTCTCGGGCATCAACACTATCA 1000
Query 977 TGTACTACAGTGCAACCATTCTGCAGATGTCTGGTGTTGAAGATGATAGACTTGCAATATGGCTGGCTTCAGTT 1050
||||||||||.||||||||.||.||||||||.||.||.||||||||.|||||||||||||||||||||||..|.
Sbjct 1001 TGTACTACAGCGCAACCATCCTCCAGATGTCCGGCGTGGAAGATGACAGACTTGCAATATGGCTGGCTTCGATC 1074
Query 1051 ACAGCCTTCACAAATTTCATTTTCACACTTGTGGGAGTCTGGCTTGTTGAGAAGGTGGGCCGCAGAAAGCTTAC 1124
|||||.|||||.|||||||||||||||||.||||||||||||||.||.|||||.|||||.|||||.||||||||
Sbjct 1075 ACAGCATTCACCAATTTCATTTTCACACTAGTGGGAGTCTGGCTCGTCGAGAAAGTGGGTCGCAGGAAGCTTAC 1148
Query 1125 CTTTGGTAGTTTAGCAGGTACCACCGTAGCACTCATTATTCTTGCCTTGGGATTTGTGCTATCAGCCCAAGTTT 1198
||||||||||||.|||||||||||.||||||||.|||||.||||||.||||||||.||||.||.||.||.||.|
Sbjct 1149 CTTTGGTAGTTTGGCAGGTACCACAGTAGCACTGATTATCCTTGCCCTGGGATTTTTGCTCTCGGCACAGGTCT 1222
Query 1199 CCCCACGCATCACTTTTAAGCCAATAGCTCCGTCAGGTCAGAACGCCACTTGCACAAGATACAGTTACTGTAAT 1272
|.|||||..|||||||||..||||...||||.||.|.|||.||..||||.|||||..|||||||||||||.|||
Sbjct 1223 CACCACGGGTCACTTTTAGACCAACGACTCCTTCGGATCAAAATACCACCTGCACGGGATACAGTTACTGCAAT 1296
Query 1273 GAATGTATGTTGGATCCAGACTGCGGTTTCTGCTACAAGATGAACAAATCAACTGTCATTGACTCCTCCTGTGT 1346
||.||||||.|||||||||||||.|||||||||||||||||.|||...|||.||||||||||.|||||||||||
Sbjct 1297 GAGTGTATGCTGGATCCAGACTGTGGTTTCTGCTACAAGATCAACGGTTCAGCTGTCATTGATTCCTCCTGTGT 1370
Query 1347 TCCAGTTAATAAAGCATCTACAAATGAGGCAGCCTGGGGCAGGTGTGAAAATGAAACCAAGTTCAAAACAGAAG 1420
|||||||||.|||||.|||||||.|||.||||||||||||||||||||.||||||||||||||||||.|.||||
Sbjct 1371 TCCAGTTAACAAAGCCTCTACAACTGAAGCAGCCTGGGGCAGGTGTGATAATGAAACCAAGTTCAAAGCTGAAG 1444
Query 1421 AT----ATATTTTGGGCTTACAATTTCTGCCCTACTCCATACTCCTGGACTGCACTTCTGGGCCTTATTTTATA 1490
.| | .||||||||||.||||||||||||.||.|||||||||||.|||||..|||||||..|.||.||
Sbjct 1445 GTGCTCA----CTGGGCTTACAGTTTCTGCCCTACCCCCTACTCCTGGACAGCACTCGTGGGCCTGGTGTTGTA 1514
Query 1491 TCTTGTCTTCTTTGCACCTGGAATGGGACCAATGCCTTGGACTGTGAATTCTGAAATATATCCCCTTTGGGCAA 1564
.|||||.|||||||||||||||||||||||||||||.|||||.|||||.||||||||.|||||.||.|||||||
Sbjct 1515 CCTTGTTTTCTTTGCACCTGGAATGGGACCAATGCCCTGGACCGTGAACTCTGAAATCTATCCTCTCTGGGCAA 1588
Query 1565 GAAGTACAGGAAATGCATGTTCATCTGGAATAAACTGGATTTTCAATGTCCTGGTTTCACTAACATTTTTACAC 1638
||||||||||||||||.||.|||.||||||||||||||||||||||.||.||||||||..|.||.|||||||||
Sbjct 1589 GAAGTACAGGAAATGCGTGCTCAGCTGGAATAAACTGGATTTTCAACGTGCTGGTTTCTTTGACCTTTTTACAC 1662
Query 1639 ACAGCAGAGTATCTTACATACTATGGAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCAT 1712
|||||||||||||||||||||||||||||.|||||||||||.||.|||||.||.|||||||||||.|||||..|
Sbjct 1663 ACAGCAGAGTATCTTACATACTATGGAGCATTCTTCCTCTACGCCGGATTCGCCGCTGTGGGACTGCTTTTTGT 1736
Query 1713 CTATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGGAAATTGAATCACTCTTTGACAACAGGCTATGTA 1786
|||||||||.||.|||||.|||||.||.||||||||.||||||||.|||||.|||||||||.||.||||||||.
Sbjct 1737 CTATGGCTGCCTCCCTGAAACCAAGGGGAAAAAATTGGAGGAAATCGAATCGCTCTTTGACCACCGGCTATGTT 1810
Query 1787 CATGTGGCACTTCAGATTCTGATGAAGGGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTT 1860
||||||||.||.|.||.||.|||||||||||.||.|||||.||.||.||.||.||||||||.|||||||||||.
Sbjct 1811 CATGTGGCGCTGCCGACTCGGATGAAGGGAGGTACATTGAGTACATCCGCGTGAAGGGAAGCAACTATCATCTC 1884
Query 1861 TCTGACAATGATGCTTCTGATGTGGAA 1887
||.|||||.||.||||||||.|||||.
Sbjct 1885 TCCGACAACGACGCTTCTGACGTGGAG 1911