Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14356
- Subject:
- XM_011537849.2
- Aligned Length:
- 1959
- Identities:
- 1278
- Gaps:
- 678
Alignment
Query 1 ---------------------------------------------------------ATGGGCGAGCGGCGCAG 17
|||||||||||||||||
Sbjct 1 ATGTCCCGCAAGGCAAGCGAGAATGTGGAGTACACGCTGCGGAGCCTGAGCAGCCTGATGGGCGAGCGGCGCAG 74
Query 18 GAAGCAGCCGGAGCCGGACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCACCA 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGCAGCCGGAGCCGGACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCACCA 148
Query 92 GCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGCAG 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGCAG 222
Query 166 GACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGACAC 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGACAC 296
Query 240 CGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAGGAGCTGCTGG 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAGGAGCTGCTGG 370
Query 314 TGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCCGC 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCCGC 444
Query 388 GCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGAGAC 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGAGAC 518
Query 462 ACTGCTCGCCGGCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTGCGG 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACTGCTCGCCGGCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTGCGG 592
Query 536 AGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTT 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTT 666
Query 610 GCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCAGCAGT 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCAGCAGT 740
Query 684 TCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGACAGA 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGACAGA 814
Query 758 CTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATCAAA 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATCAAA 888
Query 832 AACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGCTGGACCTGTGATCTGCAGAATGCTGAGTTATCCCCC 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGCTGGACCTGTGATCTGCAGAATGCTGAGTTATCCCCC 962
Query 906 AACTCGCCGAGCTTTAATTGTGGGTTGTGGCCTACAAATGTTCCAGCAGCTCTCAGGCATTAACACCATCATGT 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AACTCGCCGAGCTTTAATTGTGGGTTGTGGCCTACAAATGTTCCAGCAGCTCTCAGGCATTAACACCATCATGT 1036
Query 980 ACTACAGTGCAACCATTCTGCAGATGTCTGGTGTTGAAGATGATAGACTTGCAATATGGCTGGCTTCAGTTACA 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTACAGTGCAACCATTCTGCAGATGTCTGGTGTTGAAGATGATAGACTTGCAATATGGCTGGCTTCAGTTACA 1110
Query 1054 GCCTTCACAAATTTCATTTTCACACTTGTGGGAGTCTGGCTTGTTGAGAAGGTGGGCCGCAGAAAGCTTACCTT 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCCTTCACAAATTTCATTTTCACACTTGTGGGAGTCTGGCTTGTTGAGAAGGTGGGCCGCAGAAAGCTTACCTT 1184
Query 1128 TGGTAGTTTAGCAGGTACCACCGTAGCACTCATTATTCTTGCCTTGGGATTTGTGCTATCAGCCCAAGTTTCCC 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGGTAGTTTAGCAGGTACCACCGTAGCACTCATTATTCTTGCCTTGGGATTTGTGCTATCAGCCCAAGTTTCCC 1258
Query 1202 CACGCATCACTTTTAAGCCAATAGCTCCGTCAGGTCAGAACGCCACTTGCACAAGATACAGTTACTGT------ 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.||
Sbjct 1259 CACGCATCACTTTTAAGCCAATAGCTCCGTCAGGTCAGAACGCCACTTGCACAAGATACAG---CGGTCAGCCT 1329
Query 1270 ---------AATGAATGTATGTTGGATCCAGACTGCGGTTTCTGCTACAAGATGAACAAATCAACTGTCATTGA 1334
|.|| |.||||| ||||
Sbjct 1330 CACCAGGACAGTG---GCATGTT--------------GTTT--------------------------------- 1353
Query 1335 CTCCTCCTGTGTTCCAGTTAATAAAGCATCTACAAATGAGGCAGCCTGGGGCAGGTGTGAAAATGAAACCAAGT 1408
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1409 TCAAAACAGAAGATATATTTTGGGCTTACAATTTCTGCCCTACTCCATACTCCTGGACTGCACTTCTGGGCCTT 1482
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1483 ATTTTATATCTTGTCTTCTTTGCACCTGGAATGGGACCAATGCCTTGGACTGTGAATTCTGAAATATATCCCCT 1556
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1557 TTGGGCAAGAAGTACAGGAAATGCATGTTCATCTGGAATAAACTGGATTTTCAATGTCCTGGTTTCACTAACAT 1630
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1631 TTTTACACACAGCAGAGTATCTTACATACTATGGAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTC 1704
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1705 CTTTTCATCTATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGGAAATTGAATCACTCTTTGACAACAG 1778
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1779 GCTATGTACATGTGGCACTTCAGATTCTGATGAAGGGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACT 1852
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1853 ATCATCTTTCTGACAATGATGCTTCTGATGTGGAA 1887
Sbjct 1354 ----------------------------------- 1353
