Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14358
- Subject:
- XM_017009019.2
- Aligned Length:
- 1710
- Identities:
- 1045
- Gaps:
- 621
Alignment
Query 1 ------ATGGCGTATTTCATCGAGAATTTTTGGGGGGAAAAAAATAGTGGCTTTGATGTCCTCTACCATAATAT 68
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTCATGGCGTATTTCGTCGAGAATTTTTGGGGGGAAAAAAATAGTGGCTTTGATGTCCTCTACCATAATAT 74
Query 69 GAAACATGGACAGATATCGACAAAAGAACTAGCAGATTTTGTAAGGGAACGAGCTACCATAGAGGAGGCATACT 142
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAACATGGACAGATATCAACAAAAGAACTAGCAGATTTTGTAAGGGAACGAGCTACCATAGAGGAGGCATACT 148
Query 143 CCAGGTCAATGACAAAACTAGCAAAATCTGCAAGCAATTATTCACAACTTGGAACATTTGCACCAGTATGGGAT 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCAGGTCAATGACAAAACTAGCAAAATCTGCAAGCAATTATTCACAACTTGGAACATTTGCACCAGTATGGGAT 222
Query 217 GTATTCAAAACATCTACAGAGAAATTAGCAAATTGTCACTTGGATCTTGTTAGAAAATTACAAGAATTAATAAA 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTATTCAAAACATCTACAGAGAAATTAGCAAATTGTCACTTGGATCTTGTTAGAAAATTACAAGAATTAATAAA 296
Query 291 GGAAGTTCAGAAGTATGGAGAAGAACAAGTAAAGTCTCATAAAAAGACTAAAGAAGAAGTTGCAGGAACTCTGG 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAGTTCAGAAGTATGGAGAAGAACAAGTAAAGTCTCATAAAAAGACTAAAGAAGAAGTTGCAGGAACTCTGG 370
Query 365 AAGCTGTCCAAACCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAGGAAAATTACAATGCCAAGTGTGTA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGCTGTCCAAACCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAGGAAAATTACAATGCCAAGTGTGTA 444
Query 439 GAACAGGAGCGTTTGAAAAAGGAAGGAGCTACACAAAGAGAAATAGAAAAGGCAGCTGTTAAATCTAAGAAAGC 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAACAGGAGCGTTTGAAAAAGGAAGGAGCTACACAAAGAGAAATAGAAAAGGCAGCTGTTAAATCTAAGAAAGC 518
Query 513 TACAGATACTTATAAACTCTATGTGGAAAAATATGCATTAGCAAAAGCTGATTTCGAACAGAAAATGACAGAAA 586
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TACAGATACCTATAAACTCTATGTGGAAAAATATGCATTAGCAAAAGCTGATTTCGAACAGAAAATGACAGAAA 592
Query 587 CAGCTCAGAAATTTCAAGATATTGAAGAAACTCATCTCATTCACATAAAGGAAATTATAGGATCCTTGTCAAAT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGCTCAGAAATTTCAAGATATTGAAGAAACTCATCTCATTCACATAAAGGAAATTATAGGATCCTTGTCAAAT 666
Query 661 GCTATAAAGGAAATTCATTTGCAGATAGGCCAGGTCCATGAAGAATTTATAAATAACATGGCTAATACTACAGT 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTATAAAGGAAATTCATTTGCAGATAGGCCAGGTCCATGAAGAATTTATAAATAACATGGCTAATACTACAGT 740
Query 735 TGAAAGTTTGATACAAAAATTTGCTGAGTCAAAAGGCACTGGGAAGGAAAGACCTGGCCTCATTGAATTTGAAG 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGAAAGTTTGATACAAAAATTTGCTGAGTCAAAAGGCACTGGGAAGGAAAGACCTGGCCTCATTGAATTTGAAG 814
Query 809 AATGTGACACTGCTAGTGCAGTTGAAGGTATAAAACCAAGGAAAAGAAAGACCTTTGCTTTGCCAGGAATCATT 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AATGTGACACTGCTAGTGCAGTTGAAGGTATAAAACCAAGGAAAAGAAAGACCTTTGCTTTGCCAGGAATCATT 888
Query 883 AAAAAGGAAAAAGATGCAGAATCTGT-----------ATGGAGTTTCA----------CTGTTGTTGCCCAGGT 935
|||||||||||||||||||||||||| |||.||.|||| |||.|||.|
Sbjct 889 AAAAAGGAAAAAGATGCAGAATCTGTGGAATGTCCTGATGCAGATTCATTGAACATTCCTGATGTAG------- 955
Query 936 TGGAATGCA-ATGGCGCGATCTTGGCTTACTGCATTCTCCACC------------------TCCCAGGTTCAAG 990
|||.| |.||| |||.|.|| |..||| |.||| |||
Sbjct 956 ----ATGAAGAAGGC------------TACAGTAT--TAAACCAGAAACAAATCAGAATGATACCA-----AAG 1006
Query 991 CGA-----TTCTCCTC--CTA---CCTCAGCCTCC-----------------CAAGTAGCTGG-----AATTAC 1032
.|| ||||.||| ||| ..||.|.|||| .|||||.| || |||||
Sbjct 1007 AGAACCATTTCTACTCATCTAGTGATTCTGACTCCGAAGATGAAGAACCAAAGAAGTATC-GGATAGAAATTA- 1078
Query 1033 GGCGCCCA-----CCA------CCACATC------TGGCTAATTTTT---TGTATTTTTAGTAGAGACAGGG-- 1084
.|||.| ||| .|||||| ||||| |.||| ||.|||...||||...|.||||
Sbjct 1079 --AGCCTATGCATCCAAATAACTCACATCACACAATGGCT--TCTTTGGATGAATTAAAAGTATCTATAGGGAA 1148
Query 1085 --------TTTCACC----ATAT--------TGGCCAG----GCTG-GTCGCGAACTCCTGAC--CTCAGG--- 1128
|.||.|| |||| .|.|||| |.|| .||| |||.| ||.| .|.|||
Sbjct 1149 TATAACACTCTCCCCAGCAATATCTAGACACAGTCCAGTACAGATGAATCG-GAATT--TGTCTAATGAGGAGT 1219
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1220 TAACAAAATCAAAGCCATCTGCTCCACCCAATGAAAAAGGAACCAGTGATTTACTTGCTTGGGACCCCCTATTT 1293
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1294 GGACCATCTCTTGATTCATCTTCTTCATCTTCACTAACTTCATCATCATCAGCCAGGCCCACAACTCCTCTTTC 1367
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1368 TGTAGGCACCATTGTCCCACCTCCGAGGCCTGCTTCCAGACCAAAGCTTACTTCAGGCAAACTCAGTGGGATTA 1441
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1442 ATGAAATACCCAGGCCATTCAGCCCACCTGTAACTTCCAACACCAGCCCACCTCCTGCTGCACCATTAGCCCGG 1515
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1516 GCAGAAAGTTCTTCTTCTATCTCATCATCTGCTTCATTGAGTGCTGCCAATACTCCAACAGTAGAAGATGATAA 1589
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1590 TTTGATTGGGACACACACTGAAATTGAAAAGCACTGTGAGACGTCACCAGGTATTGTATCAGAAGCAAATGTAT 1663
Query 1129 -------- 1128
Sbjct 1664 GTGTTGAC 1671
