Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14378
- Subject:
- NM_001301685.1
- Aligned Length:
- 1773
- Identities:
- 308
- Gaps:
- 1464
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGCAGCTTCTGCTTCTCCAGATAATCTGGTATTCCATATGAAAAATGAGATGAGAAACATCAAGTACAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCAGTAGACTATCAACAATTGCGTGCATTAACTGAAGCAAAGAAATTGGCTTCTGCCTCTGCAAAGCTAAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGAAAAGCAATGTTGACTTCAAAGTTATCCAAAGAACAAACACTAATAAAACAACACAAGCAAGTGTGGTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGAATACCAGAGGCTGAATGAAGTCAGATGTAAAATGGAATCTGAAATAAAATCCCTTCTCAATGAAGAGAA 296
Query 1 --------ATGAATGTCTTTGTGACCTTACAAATTTT------------------------------------- 29
|||||||||||||||||||||||||||||
Sbjct 297 CATTGGAAATGAATGTCTTTGTGACCTTACAAATTTTGAGCAAGAGCTATCAGAACAACAGTGCACATATCTTA 370
Query 30 -------------------------------------------------------------------------- 29
Sbjct 371 AAAATGTAATAAATCCTATTCAGCAGCTGAGAGCAGATCTAAAATACAGACAGCATCACACTTTGCAGCATTCA 444
Query 30 -----------------------------------------GGTTGACTTTGTGAAGAAACAATTGAAAACTGT 62
|||||||||||||||||||||||||||||||||
Sbjct 445 CACCCACATATTGAGTTTAACTCCATGAAAGTATTGGAAGAGGTTGACTTTGTGAAGAAACAATTGAAAACTGT 518
Query 63 CTTTGAAAGACTTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATC 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTTGAAAGACTTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATC 592
Query 137 ATTCTTTGGAAGAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCT 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTCTTTGGAAGAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCT 666
Query 211 GATTTGAAATCTTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GATTTGAAATCTTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAA 740
Query 285 TCTGCAGTTGGAAGACATATACAGAAACTGTCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGG 358
||||||||||||||||||||||||.
Sbjct 741 TCTGCAGTTGGAAGACATATACAGG------------------------------------------------- 765
Query 359 ATCAGTACCCTGGAGATCTCTTTGGAAGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAA 432
Sbjct 766 -------------------------------------------------------------------------- 765
Query 433 TCTAGGCATGATTTGGTTGAACACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCT 506
Sbjct 766 -------------------------------------------------------------------------- 765
Query 507 GATATCAAATTGGAATAAAAATAGGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAA 580
Sbjct 766 -------------------------------------------------------------------------- 765
Query 581 CACATGAAATGGAGAGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAAG 654
Sbjct 766 -------------------------------------------------------------------------- 765
Query 655 GTTCGTCAATGGCGAGCCCACCAAGAAGAGGTAGCAAGACTGGAAATGGAAATTTCTGCCAGAAGAAGAGAAAA 728
Sbjct 766 -------------------------------------------------------------------------- 765
Query 729 GGAAGAGGAGAAAGAGAAACTGTGGAAGAAGAAGGAATTGTTGCAAAGAGCAGAGAAGAAAAAAAGCATAAAAA 802
Sbjct 766 -------------------------------------------------------------------------- 765
Query 803 AATACTGGGCCAAGAAAAAACAGAAGTGGCAAGAAATGGAAATGAGAGATCTTCAGCGTCTAGAAGAACTGAAG 876
Sbjct 766 -------------------------------------------------------------------------- 765
Query 877 AAATTAATCGCTGAACAGTCACTAAAAGACAGAGAAAGGGTTAAATATAGACAAGAATTATTGGAAAGGCGTTT 950
Sbjct 766 -------------------------------------------------------------------------- 765
Query 951 GATGGAGAAAAAGGAAGTGGCCCTTCAAGAAGCTCATGAAGACAAAGAGAGAGCACGGCGGCTAGAAGCCCTTA 1024
Sbjct 766 -------------------------------------------------------------------------- 765
Query 1025 GGAAACAGGTTGCTGTTGTTGCTCAATTTGATCCTGTTAGAATGATGTCAGATACAATGGCATCAAAAGCTAGA 1098
Sbjct 766 -------------------------------------------------------------------------- 765
Query 1099 ATGGGCATTGAAATTGAAGAAGAATTTATTCTTCAAAAGCCACTCTTCACATTGAATACATACAATGAACAGCA 1172
Sbjct 766 -------------------------------------------------------------------------- 765
Query 1173 GATAATTTCTGACCCTAGACTTCGCTTCGAGTTAGCACTTCGAGAAGCTGGACTTCATAGAACACTTTATGCTA 1246
Sbjct 766 -------------------------------------------------------------------------- 765
Query 1247 AAGAGATATTACCAAAAATTAGTCCTCAAAAACCTCCAAGAAAGGACATGGAGTCTACTGTATTGAAAATA 1317
Sbjct 766 ----------------------------------------------------------------------- 765
