Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14378
- Subject:
- XM_005246319.3
- Aligned Length:
- 1836
- Identities:
- 1313
- Gaps:
- 519
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGCAGCTTCTGCTTCTCCAGATACGGAAAACATGAATCAAAGAGACCAACCATTCATGACAATTCAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAATGATAGCTCAGATAATCTGGTATTCCATATGAAAAATGAGATGAGAAACATCAAGTACAAACCAGTAGACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCAACAATTGCGTGCATTAACTGAAGCAAAGAAATTGGCTTCTGCCTCTGCAAAGCTAAAGATCAGAAAAGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGTTGACTTCAAAGTTATCCAAAGAACAAACACTAATAAAACAACACAAGCAAGTGTGGTGGCAGGAATACCA 296
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 297 GAGGCTGAATGAAGTCAGATGTAAAATGGAATCTGAAATAAAATCCCTTCTCAATGAAGAGAACATTGGAAATG 370
Query 4 AATGTCTTTGTGACCTTACAAATTTT------------------------------------------------ 29
||||||||||||||||||||||||||
Sbjct 371 AATGTCTTTGTGACCTTACAAATTTTGAGCAAGAGCTATCAGAACAACAGTGCACATATCTTAAAAATGTAATA 444
Query 30 -------------------------------------------------------------------------- 29
Sbjct 445 AATCCTATTCAGCAGCTGAGAGCAGATCTAAAATACAGACAGCATCACACTTTGCAGCATTCACACCCACATAT 518
Query 30 ------------------------------GGTTGACTTTGTGAAGAAACAATTGAAAACTGTCTTTGAAAGAC 73
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGTTTAACTCCATGAAAGTATTGGAAGAGGTTGACTTTGTGAAGAAACAATTGAAAACTGTCTTTGAAAGAC 592
Query 74 TTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATCATTCTTTGGAA 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATCATTCTTTGGAA 666
Query 148 GAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCTGATTTGAAATC 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCTGATTTGAAATC 740
Query 222 TTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAATCTGCAGTTGG 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAATCTGCAGTTGG 814
Query 296 AAGACATATACAGAAACTGTCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGGATCAGTACCCT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGACATATACAGAAACTGTCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGGATCAGTACCCT 888
Query 370 GGAGATCTCTTTGGAAGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAATCTAGGCATGA 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGAGATCTCTTTGGAAGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAATCTAGGCATGA 962
Query 444 TTTGGTTGAACACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCTGATATCAAATT 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTTGGTTGAACACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCTGATATCAAATT 1036
Query 518 GGAATAAAAATAGGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAACACATGAAATG 591
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGAATAAAAATAAGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAACACATGAAATG 1110
Query 592 GAGAGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAAGGTTCGTCAATG 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGAGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAAGGTTCGTCAATG 1184
Query 666 GCGAGCCCACCAAGAAGAGGTAGCAAGACTGGAAATGGAAATTTCTGCCAGAAGAAGAGAAAAGGAAGAGGAGA 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCGAGCCCACCAAGAAGAGGTAGCAAGACTGGAAATGGAAATTTCTGCCAGAAGAAGAGAAAAGGAAGAGGAGA 1258
Query 740 AAGAGAAACTGTGGAAGAAGAAGGAATTGTTGCAAAGAGCAGAGAAGAAAAAAAGCATAAAAAAATACTGGGCC 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||||||||||
Sbjct 1259 AAGAGAAACTGTGGAAGAAGAAGGAATTGTTGCAAAGAGCAGAGAAGAAAAAAAAAATAAAAAAATACTGGGCC 1332
Query 814 AAGAAAAAACAGAAGTGGCAAGAAATGGAAATGAGAGATCTTCAGCGTCTAGAAGAACTGAAGAAATTAATCGC 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGAAAAAACAGAAGTGGCAAGAAATGGAAATGAGAGATCTTCAGCGTCTAGAAGAACTGAAGAAATTAATCGC 1406
Query 888 TGAACAGTCACTAAAAGACAGAGAAAGGGTTAAATATAGACAAGAATTATTGGAAAGGCGTTTGATGGAGAAAA 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGAACAGTCACTAAAAGACAGAGAAAGGGTTAAATATAGACAAGAATTATTGGAAAGGCGTTTGATGGAGAAAA 1480
Query 962 AGGAAGTGGCCCTTCAAGAAGCTCATGAAGACAAAGAGAGAGCACGGCGGCTAGAAGCCCTTAGGAAACAGGTT 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGGAAGTGGCCCTTCAAGAAGCTCATGAAGACAAAGAGAGAGCACGGCGGCTAGAAGCCCTTAGGAAACAGGTT 1554
Query 1036 GCTGTTGTTGCTCAATTTGATCCTGTTAGAATGATGTCAGATACAATGGCATCAAAAGCTAGAATGGGCATTGA 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCTGTTGTTGCTCAATTTGATCCTGTTAGAATGATGTCAGATACAATGGCATCAAAAGCTAGAATGGGCATTGA 1628
Query 1110 AATTGAAGAAGAATTTATTCTTCAAAAGCCACTCTTCACATTGAATACATACAATGAACAGCAGATAATTTCTG 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AATTGAAGAAGAATTTATTCTTCAAAAGCCACTCTTCACATTGAATACATACAATGAACAGCAGATAATTTCTG 1702
Query 1184 ACCCTAGACTTCGCTTCGAGTTAGCACTTCGAGAAGCTGGACTTCATAGAACACTTTATGCTAAAGAGATATTA 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACCCTAGACTTCGCTTCGAGTTAGCACTTCGAGAAGCTGGACTTCATAGAACACTTTATGCTAAAGAGATATTA 1776
Query 1258 CCAAAAATTAGTCCTCAAAAACCTCCAAGAAAGGACATGGAGTCTACTGTATTGAAAATA 1317
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1777 CCAAAAATTAGTCCTCAAAAACCTCCAAGAAAGGACATGGAGTCTACTGTATTTAAAATA 1836
