Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14378
- Subject:
- XM_011510638.3
- Aligned Length:
- 1875
- Identities:
- 1313
- Gaps:
- 558
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGCAGCTTCTGCTTCTCCAGATACGGAAAACATGAATCAAAGAGACCAACCATTCATGACAATTCAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAATGATAGCTCAGATAATCTGGTATTCCATATGAAAAATGAGATGAGAAACATCAAGTACAAACCAGTAGACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCAACAATTGCGTGCATTAACTGAAGCAAAGAAATTGGCTTCTGCCTCTGCAAAGCTAAAGATCAGAAAAGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGTTGACTTCAAAGTTATCCAAAGAACAAACACTAATAAAACAACACAAGCAAGTGTGGTGGCAGGAATACCA 296
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 297 GAGGCTGAATGAAGTCAGATGTAAAATGGAATCTGAAATAAAATCCCTTCTCAATGAAGAGAACATTGGAAATG 370
Query 4 AATGTCTTTGTGACCTTACAAATTTT------------------------------------------------ 29
||||||||||||||||||||||||||
Sbjct 371 AATGTCTTTGTGACCTTACAAATTTTGAGCAAGAGCTATCAGAACAACAGTGCACATATCTTAAAAATGTAATA 444
Query 30 -------------------------------------------------------------------------- 29
Sbjct 445 AATCCTATTCAGCAGCTGAGAGCAGATCTAAAATACAGACAGCATCACACTTTGCAGCATTCACACCCACATAT 518
Query 30 ------------------------------GGTTGACTTTGTGAAGAAACAATTGAAAACTGTCTTTGAAAGAC 73
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGTTTAACTCCATGAAAGTATTGGAAGAGGTTGACTTTGTGAAGAAACAATTGAAAACTGTCTTTGAAAGAC 592
Query 74 TTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATCATTCTTTGGAA 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATCATTCTTTGGAA 666
Query 148 GAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCTGATTTGAAATC 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCTGATTTGAAATC 740
Query 222 TTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAATCTGCAGTTGG 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAATCTGCAGTTGG 814
Query 296 AAGACATATACAGAAACTGTCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGGATCAGTACCCT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGACATATACAGAAACTGTCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGGATCAGTACCCT 888
Query 370 GGAGATCTCTTTGGAAGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAATCTAGGCATGA 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGAGATCTCTTTGGAAGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAATCTAGGCATGA 962
Query 444 TTTGGTTGAACACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCTGATATCAAATT 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTTGGTTGAACACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCTGATATCAAATT 1036
Query 518 GGAATAAAAATAGGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAACACATGAAATG 591
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGAATAAAAATAAGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAACACATGAAATG 1110
Query 592 GAGAGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAA------------ 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGAGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAAGGAAGTGATTCT 1184
Query 654 ---------------------------GGTTCGTCAATGGCGAGCCCACCAAGAAGAGGTAGCAAGACTGGAAA 700
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATTCAGAGATAACCAATATCATTATTTGGTTCGTCAATGGCGAGCCCACCAAGAAGAGGTAGCAAGACTGGAAA 1258
Query 701 TGGAAATTTCTGCCAGAAGAAGAGAAAAGGAAGAGGAGAAAGAGAAACTGTGGAAGAAGAAGGAATTGTTGCAA 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGAAATTTCTGCCAGAAGAAGAGAAAAGGAAGAGGAGAAAGAGAAACTGTGGAAGAAGAAGGAATTGTTGCAA 1332
Query 775 AGAGCAGAGAAGAAAAAAAGCATAAAAAAATACTGGGCCAAGAAAAAACAGAAGTGGCAAGAAATGGAAATGAG 848
|||||||||||||||||||..|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGAGCAGAGAAGAAAAAAAAAATAAAAAAATACTGGGCCAAGAAAAAACAGAAGTGGCAAGAAATGGAAATGAG 1406
Query 849 AGATCTTCAGCGTCTAGAAGAACTGAAGAAATTAATCGCTGAACAGTCACTAAAAGACAGAGAAAGGGTTAAAT 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGATCTTCAGCGTCTAGAAGAACTGAAGAAATTAATCGCTGAACAGTCACTAAAAGACAGAGAAAGGGTTAAAT 1480
Query 923 ATAGACAAGAATTATTGGAAAGGCGTTTGATGGAGAAAAAGGAAGTGGCCCTTCAAGAAGCTCATGAAGACAAA 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATAGACAAGAATTATTGGAAAGGCGTTTGATGGAGAAAAAGGAAGTGGCCCTTCAAGAAGCTCATGAAGACAAA 1554
Query 997 GAGAGAGCACGGCGGCTAGAAGCCCTTAGGAAACAGGTTGCTGTTGTTGCTCAATTTGATCCTGTTAGAATGAT 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAGAGAGCACGGCGGCTAGAAGCCCTTAGGAAACAGGTTGCTGTTGTTGCTCAATTTGATCCTGTTAGAATGAT 1628
Query 1071 GTCAGATACAATGGCATCAAAAGCTAGAATGGGCATTGAAATTGAAGAAGAATTTATTCTTCAAAAGCCACTCT 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GTCAGATACAATGGCATCAAAAGCTAGAATGGGCATTGAAATTGAAGAAGAATTTATTCTTCAAAAGCCACTCT 1702
Query 1145 TCACATTGAATACATACAATGAACAGCAGATAATTTCTGACCCTAGACTTCGCTTCGAGTTAGCACTTCGAGAA 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCACATTGAATACATACAATGAACAGCAGATAATTTCTGACCCTAGACTTCGCTTCGAGTTAGCACTTCGAGAA 1776
Query 1219 GCTGGACTTCATAGAACACTTTATGCTAAAGAGATATTACCAAAAATTAGTCCTCAAAAACCTCCAAGAAAGGA 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCTGGACTTCATAGAACACTTTATGCTAAAGAGATATTACCAAAAATTAGTCCTCAAAAACCTCCAAGAAAGGA 1850
Query 1293 CATGGAGTCTACTGTATTGAAAATA 1317
||||||||||||||||||.||||||
Sbjct 1851 CATGGAGTCTACTGTATTTAAAATA 1875
