Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14380
- Subject:
- NR_158712.1
- Aligned Length:
- 2574
- Identities:
- 948
- Gaps:
- 1626
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGGAAGCTCTGCCTGTGCGACCGCCGCCCACCCGAGCCTATCTGGGCTGCGTCTTCTCGCCGCTGCTCTTCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCAACGCCCCAATCCTTGCGTGTGCTTGCAGTCCCACCCCACACTCAGCCTTGTGTCCCTCGATCCAGTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGACTTCCATTTCCCACCCTAAACCGCCTACCCGGTGTCTGTTCCCCGCCCGGTTGTCCTCGCCCTGCTGCGC 222
Query 1 ---------------------------ATGGCGCTGNCAGACGCTGCAGAGCTCGTGGGTGACCTTCCGCAAGA 47
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 223 TGAGTGTCCCCTGTTAGCCTCGACCCCATGGCGCTG-CAGACGCTGCAGAGCTCGTGGGTGACCTTCCGCAAGA 295
Query 48 TCCTGTCTCACTTCCCCGAGGAGCTGAGTCTGGCTTTCGTCTACGGCTCCGGGGTGTACCGCCAGGCAGGGCCG 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 TCCTGTCTCACTTCCCCGAGGAGCTGAGTCTGGCTTTCGTCTACGGCTCCGGGGTGTACCGCCAGGCAGGGCCG 369
Query 122 AGTTCAGACCAGAAGAATGCTATGCTGGACTTTGTGTTCACAGTAGATGACCCTGTCGCATGGCATTCAAAGAA 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 AGTTCAGACCAGAAGAATGCTATGCTGGACTTTGTGTTCACAGTAGATGACCCTGTCGCATGGCATTCAAAGAA 443
Query 196 CCTGAAGAAAAATTGGAGTCACTACTCTTTCCTAAAAGTTTTAGGGCCCAAGATTATCACGTCCATCCAGAATA 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 CCTGAAGAAAAATTGGAGTCACTACTCTTTCCTAAAAGTTTTAGGGCCCAAGATTATCACGTCCATCCAGAATA 517
Query 270 ACTATGGCGCTGGAGTTTACTACAATTCATTGATCATGTGTAATGGTAGGCTTATCAAATATGGAGTTATTAGC 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 ACTATGGCGCTGGAGTTTACTACAATTCATTGATCATGTGTAATGGTAGGCTTATCAAATATGGAGTTATTAGC 591
Query 344 ACTAACGTTCTGATTGAAGATCTCCTCAACTGGAATAACTTATACATTGCTGGACGACTCCAAAAACC------ 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 ACTAACGTTCTGATTGAAGATCTCCTCAACTGGAATAACTTATACATTGCTGGACGACTCCAAAAACCGGCCTC 665
Query 412 -------------------------------------------------------------------------- 411
Sbjct 666 TCTGGCAGTGTCCCAAGAGTTCACTGGCTTTTCACTCTGAACAACAAATAACAGTGCTGCTGAGACAAGTTCCT 739
Query 412 -------------------------------------------------------------------------- 411
Sbjct 740 AGTTCACCTTTCATTGAAGAACCAGATCAGCACAGTAGCAGAATCTTCCGAACTGACATTTTTCCTTTGAGGTC 813
Query 412 -------------------------------------------------------------------------- 411
Sbjct 814 TCAACTGTGTCTTTCAGGCTGGAGTGTAGTGTCATGATCATGGCTCACTGCAACCCACTGCAGCCTCAACCACC 887
Query 412 -------------------------------------------------------------------------- 411
Sbjct 888 TGGACTGAAGCTGTCTTCCTACCTCAACCTCCTGAGTATCTGGGACCACACATGTGCATCACTGTGCCTGGCTA 961
Query 412 -------------------------------------------------------------------------- 411
Sbjct 962 GGTGTTTGTTTTTTTTGTTTTTGTTTTATAGAGATGGGGTCTCACTATGTTGCCCAGGCTGGTCTCATGATCCC 1035
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1036 CCTGCTTTGGCCTCCCAAAGTGCTGAGATTACAGATGTGAGCCACCACACCCAGTCACTCTTTGTATTTTAATG 1109
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1110 GATTTGCAGAAAGTCTCAGATGGAAGCTTCTACTCTGTATTGAGGAGAAAAATTCTTTCTGAGCGAAGCAGTTG 1183
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1184 CTAGTATTCTAGGCACTTTACATTTATTATTATAGTCAATCTTTGTGACGATTCTTTGATGCAAATCATTTGCC 1257
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1258 CAAACTCACATAGCTAGTAAGTACCTGGACTTGAGCCCATACCTATCTCTAAAACCCGTTCTTTTTCTACTGTA 1331
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1332 GCTAGTTTTCTTTCATTTTTCCTTAGTCAAGTTCAAAATCGATGTATCTAGAAAGTGCGAAATAGAGCATGAAC 1405
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1406 TTCCTATGTTAGATATGGTCCAAGATTACAGATGAGGTCTAAATAAAGAGGTAAAATGCCTCTGTCGACTAAAA 1479
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1480 AATTAAGTGACGACAGTGAGATTATAAAATTTAAAAATATTAAAGTTTCCAAAGGACTTTTGCTCTTTTTCTAA 1553
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1554 ACCTATGCTGCATTTCCTCATTTAAGAAGAATATTTGTTTTCTTTGGCATTTTGATCCTTTCCTGTGTCATGAT 1627
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1628 TTCTTTGACCTTGGCATAAAACAAGGAGATTCTGGGATTACTTATTAGAGGAACAATTTTGTGTCACCTGAACC 1701
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1702 AGTATTCCAAGATCTTCAGTGGGAAGAGAGTTTGAGATAGTTCCAGTGCATTTGTAACCCATGCTTGAGCAATA 1775
Query 412 -------------------------------------------GGTGAAAATTATCTCAGTGAACGAGGATGTC 442
|||||||||||||||||||||||||||||||
Sbjct 1776 CTCCACTTCTGGAATTTTTCTTCCCAATGTTCTGCTTCTTTCAGGTGAAAATTATCTCAGTGAACGAGGATGTC 1849
Query 443 ACTCTTAGATCAGCCCTCGATAGAAATCTGAAGAGTGCTGTGACCGCTGCTTTCCTCATGCTCCCCGAAAGCTT 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 ACTCTTAGATCAGCCCTCGATAGAAATCTGAAGAGTGCTGTGACCGCTGCTTTCCTCATGCTCCCCGAAAGCTT 1923
Query 517 TTCTGAAGAAGACCTCTTCATAGAGATTGCCGGTCTCTCCTATTC----------------------------- 561
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1924 TTCTGAAGAAGACCTCTTCATAGAGATTGCCGGTCTCTCCTATTCAGATGAGAAAACTGAGGCCCAGAATGGTT 1997
Query 562 -----------------------------------------------------------AGGTGACTTTCGGAT 576
|||||||||||||||
Sbjct 1998 CCCTGTCTAAGGTCACTCATCTGGTACATGGTGGACTAGTTTGAATACCAGCTTTCTAAAGGTGACTTTCGGAT 2071
Query 577 GGTGGTTGGAGAAGATAAAACAAAAGTGTTGAATATTGTGAAGCCCAATATAGCCCACTTTCGAGAGCTCTATG 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2072 GGTGGTTGGAGAAGATAAAACAAAAGTGTTGAATATTGTGAAGCCCAATATAGCCCACTTTCGAGAGCTCTATG 2145
Query 651 GCAGCATACTACAGGAAAATCCTCAAGTGGTGTATAAAAGCCAGCAAGGCTGGCTGGAGATAGATAAAAGCCCA 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146 GCAGCATACTACAGGAAAATCCTCAAGTGGTGTATAAAAGCCAGCAAGGCTGGCTGGAGATAGATAAAAGCCCA 2219
Query 725 GAAGGACAGTTCACTCAGCTGATGACATTGCCCAAAACCTTACAGCAACAGATAAATCATATTATGGACCCTCC 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 GAAGGACAGTTCACTCAGCTGATGACATTGCCCAAAACCTTACAGCAACAGATAAATCATATTATGGACCCTCC 2293
Query 799 TGGAAAAAACAGAGATGTGGAAGAAACTTTATTCCAAGTGGCTCATGATCCCGACTGTGGAGATGTGGTGCGAC 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2294 TGGAAAAAACAGAGATGTGGAAGAAACTTTATTCCAAGTGGCTCATGATCCCGACTGTGGAGATGTGGTGCGAC 2367
Query 873 TA---------------------------------------------------------------GGCCTGAAG 883
|| |||||||||
Sbjct 2368 TAGGGCTTTCAGCAATCGTGAGACCGTCTAGTATAAGACAGAGCACGAAAGGCATTTTTACTGCTGGCCTGAAG 2441
Query 884 AAGTCAGTGATTTATAGTTCACTAAAACTGCACAAAATGTGGAAAGGGTGGCTGAGGAAAACATCC-------- 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2442 AAGTCAGTGATTTATAGTTCACTAAAACTGCACAAAATGTGGAAAGGGTGGCTGAGGAAAACATCCTGATTTTG 2515
Query 950 ---------------------------------------------------------- 949
Sbjct 2516 CTTGCTTTTATATATGTTATGTGTAGATGAATAAAGTGTTTGATCCTTTTTGACAGAA 2573
