Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14451
- Subject:
- NM_001278296.2
- Aligned Length:
- 2249
- Identities:
- 406
- Gaps:
- 1819
Alignment
Query 1 ---ATGCTCACCCAGGCTTCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAACTCTGGTGG 71
|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAACTCTGGTGG 74
Query 72 ATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCA 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCA 148
Query 146 CCATCAGCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAAG 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCATCAGCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAAG 222
Query 220 AGGGTCATCTGGGGCATTGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGAAAGGAGACCACAAG 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGGTCATCTGGGGCATTGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGAAAGGAGACCACAAG 296
Query 294 GAATCTGGTTCTGAAAAATCGATCCTTGAAACTCCAGAAGATGAAGCACAGGTACCAGTATAAGGGATCAAGGA 367
||||||||||||||||||||||||||||||||||||||||||||||.|||||..|| |.|.||
Sbjct 297 GAATCTGGTTCTGAAAAATCGATCCTTGAAACTCCAGAAGATGAAGTACAGGCCCC------------CCAAGA 358
Query 368 CCCAG----------------TGCCACAGC-------CTTGAGCCCCGAAAGCAGGCTCTCTTCAAAACAAAAC 418
||.|| |.||.|||| |.|||||| |||||
Sbjct 359 CCAAGTTCTTCTTCACGGTCATCCCTCAGCCCATCTTCCTGAGCC-------CAGGC----------------- 408
Query 419 AAAACAAACAAAAAAAACCTTTA------ACAT---------GCCATATAAAAGCCAGTGAGTGTTTAAAATAC 477
|.||||.|.| .||| ||| |.|..|.||.|..||| |||
Sbjct 409 -------------ATAACCCTCACGCTCCCCATCGTCTTCCGGCC-TCTGGAGGCGAAGGAG---------TAC 459
Query 478 ATGCA---------GTATGAA----------------------------------------------------- 489
|||.| ||.|||.
Sbjct 460 ATGGACCAGCTGTGGTTTGAGAAAGCGGAGGGGATGTTCTGTGTCGGCCTACGGGCCACCCTGCCCTGCCACAG 533
Query 490 -------------------------------------------------------------------------- 489
Sbjct 534 GCTGATCTGCCGCCCACCATCCCTGCAGCTGCCCATGTGTGCTGTGGGAGATACGACTGAGGCCTTTTTCTGCC 607
Query 490 -------------------------------------------------------------------------- 489
Sbjct 608 TGGATAATGTGGGGGACCTGCCCACCTTCTTCACCTGGGAGTTCTCCAGCCCATTCCAGATGCTGCCCGCCACG 681
Query 490 -------------------------------------------------------------------------- 489
Sbjct 682 GGGCTCCTGGAGCCAGGCCAGGCCTCTCAGATCAAGGTGACCTTTCAGCCCCTTACAGCCGTCATCTACGAGGT 755
Query 490 -------------------------------------------------------------------------- 489
Sbjct 756 GCAGGCCACGTGCTGGTACGGGGCGGGCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGGCTGTGGCCAAGTGCG 829
Query 490 -------------------------------------------------------------------------- 489
Sbjct 830 CCCAGCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTAC 903
Query 490 -------------------------------------------------------------------------- 489
Sbjct 904 TTTGGCTCTGTTGCTGTGGGCTGCACCTCGGAGAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAATGCCCC 977
Query 490 -------------------------------------------------------------------------- 489
Sbjct 978 CTTCAGGATTGAAATTTCCCCGGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCG 1051
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1052 TGCTTCCGGGAGAGAAGAAATGTGTGTCGGTGTTCTTCCACCCCAAGACTCTGGACACCAGAACTGTGGACTAC 1125
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1126 TGCTCCATCATGCCTTCTGGCTGTGCCTCCAAGACCCTGCTTAAAGTCGTTGGTTTCTGTAGAGGCCCTGCTGT 1199
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1200 GTCCCTGCAGCACTACTGTGTCAACTTCAGCTGGGTCAACCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTG 1273
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1274 AGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGAGTGTCTTTACCATCAGGCCT 1347
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1348 GCCTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCCTGCACTGTGCCTTCCAGCCCACTCACCCCATCATCTG 1421
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1422 CTTTCGGCGTGTGGCCTGTCTCATCCACCACCAGGACCCACTGTTCCTGGACCTGATGGGGACCTGCCACTCGG 1495
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1496 ACAGCACCAAGCCAGCCATCCTGAAGCCTCAGCACCTCACCTGGTACCGCACACACCTGGCCCGGGGCCTGACG 1569
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1570 CTCTACCCCCCTGACATCCTGGATGCCATGCTGAAGGAGAAGAAGCTGGCACAGGACCAGAACGGGGCTCTCAT 1643
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1644 GATTCCCATCCAGGATCTGGAGGACATGCCGGCCCCGCAGTACCCTTATATCCCCCCCATGACCGAGTTCTTCT 1717
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1718 TCGACGGCACCAGCGACATAACCATCTTCCCCCCGCCCATCAGTGTAGAGCCTGTCGAGGTAGACTTCGGTGCC 1791
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1792 TGCCCAGGGCCTGAGGCCCCCAACCCTGTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGT 1865
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1866 CTGGACGCGAAGGTCTGACTGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTGCCCCCACTCAAGTCCATGG 1939
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1940 CCATGCGCCTGCACTTCCAGCCGCCTCACCCCAACTGCCTTTACACGGTGGAGCTCGAAGCCTTCGCCATCTAT 2013
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2014 AAGGTGTGTGCACGCAATGAGAGGGAGGAATGCGGGGTCTCTGCTAGGAGCCTGAGTGGCTTGGTGGGGTGGCA 2087
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2088 GGAAGTGACCGAGGGCAGCTTCAGGCTCCATCCTCTGCGTGCCAGGCTTTCTCTTGGCTGGACAGTGACCCCTA 2161
Query 490 ----------------------------- 489
Sbjct 2162 TGAGTTTGTCTCCTCCAAAGCTCCTGGCC 2190
