Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14451
- Subject:
- XM_011510916.1
- Aligned Length:
- 5591
- Identities:
- 420
- Gaps:
- 5149
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGTTTACCTTAACCGGTTGTAGACTGGTGGAGAAAACCCAGAAGGTGGAGAATCCATCAGTCTCATTTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTTCTTTCCCCCTTATTCCTCTTCTCCTAAGAGGCAAGAGTGTTCAGAAGAAACAAGCAGAGAGTAAAAGCC 148
Query 1 -----------------------------------------------------ATGCTCACCCAGGCTTCAAGC 21
|||||||||||||||.|||||
Sbjct 149 AGATAAAGCTCCATACTCAGAGTGCTCCCTTTGGACTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGC 222
Query 22 TCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAACTCTGGTGGATCCTGCCTGAGTGCCAGCACAGT 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAACTCTGGTGGATCCTGCCTGAGTGCCAGCACAGT 296
Query 96 GGCCATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCACCATCAGCGCCCAGCCCGCAAGCT 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCCATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCACCATCAGCGCCCAGCCCGCAAGCT 370
Query 170 CCATGGACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGGTG 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCATGGACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGGTG 444
Query 244 GCTGAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGAAAAATCGATC 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCTGAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGAAAAATCGATC 518
Query 318 CTTGAAACTCCAGAAGATGAAGCACAGGTACCAGTATAAGGGATCAAGGACCCAG----------------TGC 375
||||||||||||||||||||||.|||||..|| |.|.||||.|| |.|
Sbjct 519 CTTGAAACTCCAGAAGATGAAGTACAGGCCCC------------CCAAGACCAAGTTCTTCTTCACGGTCATCC 580
Query 376 CACAGC-------CTTGAGCCCCGAAAG----------CAGGCTC-------TCTTCAAAACAAAACAAAACAA 425
|.|||| |.||||||| || ||.|||| |||||
Sbjct 581 CTCAGCCCATCTTCCTGAGCCC----AGGCATAACCCTCACGCTCCCCATCGTCTTC----------------- 633
Query 426 ACAAAAAAAA-----------------CCTTTAACATGC---CATATA-------AAAGCCA-GT--------- 462
|||| ||| || |||.|| .|.|||| ||
Sbjct 634 ----------CGGCCTCTGGAGGCGCCCCTT--ACA-GCCGTCATCTACGAGGTGCAGGCCACGTGCTGGTACG 694
Query 463 ----------------GAGTGTTTAAAATACA--TGCAGTATG-----AA------------------------ 489
||| |...|..||.|| |||||..|| ||
Sbjct 695 GGGCGGGCAGCCGGCAGAG-GAGCAGCATCCAGCTGCAGGCTGTGGCCAAGTGCGCCCAGCTGCTGGTGAGCAT 767
Query 490 -------------------------------------------------------------------------- 489
Sbjct 768 AAAGCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTACTTTGGCTCTGTTGCTGTGG 841
Query 490 -------------------------------------------------------------------------- 489
Sbjct 842 GCTGCACCTCGGAGAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAATGCCCCCTTCAGGATTGAAATTTCC 915
Query 490 -------------------------------------------------------------------------- 489
Sbjct 916 CCGGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAGAGAAGAA 989
Query 490 -------------------------------------------------------------------------- 489
Sbjct 990 ATGTGTGTCGGTGTTCTTCCACCCCAAGACTCTGGACACCAGAACTGTGGACTACTGCTCCATCATGCCTTCTG 1063
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1064 GCTGTGCCTCCAAGACCCTGCTTAAAGTCGTTGGTTTCTGTAGAGGCCCTGCTGTGTCCCTGCAGCACTACTGT 1137
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1138 GTCAACTTCAGCTGGGTCAACCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCAC 1211
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1212 GGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGAGTGTCTTTACCATCAGGCCTGCCTTTGGGACGCTGGTGG 1285
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1286 GCAAGGCCCGTATGACCCTGCACTGTGCCTTCCAGCCCACTCACCCCATCATCTGCTTTCGGCGTGTGGCCTGT 1359
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1360 CTCATCCACCACCAGGACCCACTGTTCCTGGACCTGATGGGGACCTGCCACTCGGACAGCACCAAGCCAGCCAT 1433
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1434 CCTGAAGCCTCAGCACCTCACCTGGTACCGCACACACCTGGCCCGGGGCCTGACGCTCTACCCCCCTGACATCC 1507
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1508 TGGATGCCATGCTGAAGGAGAAGAAGCTGGCACAGGACCAGAACGGGGCTCTCATGATTCCCATCCAGGATCTG 1581
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1582 GAGGACATGCCGGCCCCGCAGTACCCTTATATCCCCCCCATGACCGAGTTCTTCTTCGACGGCACCAGCGACAT 1655
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1656 AACCATCTTCCCCCCGCCCATCAGTGTAGAGCCTGTCGAGGTAGACTTCGGTGCCTGCCCAGGGCCTGAGGCCC 1729
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1730 CCAACCCTGTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGAC 1803
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1804 TGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCCATGCGCCTGCACTTCCA 1877
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1878 GCCGCCTCACCCCAACTGCCTTTACACGGTGGAGCTCGAAGCCTTCGCCATCTATAAGGTCCTGCAGAGCTACA 1951
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1952 GTAATATTGAGGAGGACTGCACCATGTGCCCATCCTGGTGCCTGACGGTGCGGGCACGAGGCCACAGCTATTTC 2025
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2026 GCTGGCTTTGAGCACCACATCCCCCAGTATTCCCTAGATGTCCCCAAGCTATTTCCAGCAGTGTCCTCCGGTGA 2099
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2100 GCCCACCTACCGCAGCCTGCTCCTGGTCAACAAAGACTGCAAGCTGCTGACCTTCAGCCTGGCCCCCCAGAGAG 2173
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2174 GCTCAGACGTCATCCTTCGGCCCACTTCGGGCCTTGTGGCACCCGGGGCCCACCAGATCATCCTCATCTGCACC 2247
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2248 TACCCTGAGGGCAGCTCCTGGAAGCAGCACACTTTCTATCTGCAGTGCAATGCTTCCCCCCAGTATCTCAAGGA 2321
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2322 GGTGAGCATGTACAGCCGGGAGGAGCCACTGCAGCTGAAGCTGGACACCCACAAAAGCCTCTACTTCAAGCCCA 2395
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2396 CCTGGGTGGGCTGCTCCTCCACCAGCCCCTTCACCTTCCGCAACCCCTCGCGTCTGCCCCTGCAGTTCGAGTGG 2469
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2470 AGGGTCTCTGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCCCTCCAGGGGGCTAATCCAGCCCAACGAGAGACT 2543
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2544 TACGCTGACGTGGACCTTCAGCCCTTTGGAGGAGACCAAGTACCTGTTCCAAGTGGGGATGTGGGTCTGGGAAG 2617
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2618 CCGGCCTGTCCCCAAATGCCAACCCCGCTGCCACCACCCACTACATGCTCCGGCTGGTGGGCGTTGGGCTCACC 2691
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2692 AGCAGCCTCTCTGCAAAGGAAAAGGAGCTGGCCTTTGGGAATGTGCTGGTGAACAGCAAGCAGTCCAGGTTCCT 2765
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2766 TGTCCTCCTGAATGACGGCAACTGCACCCTCTATTACCGCCTCTACCTGGAGCAGGGCAGCCCTGAGGCCGTTG 2839
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2840 ACAACCACCCCCTCGCTCTGCAGCTGGACCGAACAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGC 2913
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2914 CTGACTGCCTGTCCCAAGCAGCGGTCCCAGTACTCCTGGACCATCACCTACTCTCTCCTTTCCCACAGAGATAA 2987
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2988 CAAGGCTGGGGAGAAGCAGGAGCTGTGCTGCGTCTCCCTGGTGGCCGTGTACCCCTTGCTTTCCATCCTGGATG 3061
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3062 TCAGCTCCATGGGCAGTGCTGAGGGTATCACCCGGAAGCACCTGTGGCGCCTCTTCTCTCTGGACCTGCTTAAC 3135
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3136 AGTTACTTGGAGCGTGACCCCACCCCCTGTGAGCTCACCTACAAGGTGCCCACCCGGCACAGCATGAGCCAGAT 3209
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3210 CCCCCCCGTCCTCACCCCTTTAAGGCTTGACTTCAATTTCGGGGCCGCACCATTCAAGGCCCCACCTTCCGTGG 3283
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3284 TATTCCTGGCCCTGAAGAACAGCGGAGTGGTGTCCCTGGACTGGGCCTTCCTCCTTCCAAGTGACCAGCGGATT 3357
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3358 GACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTG 3431
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3432 CCTCTTCTCCATCAGCCCCAAGGCTGGGAGCCTGAGTCCTGGGCAGGAGCAGATGGTGGAGTTAAAATACAGCC 3505
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3506 ACCTGTTCATCGGTACTGATCACCTCCCAGTGCTCTTCAAGGTGTCCCATGGCCGGGAGATCCTGCTAAATTTC 3579
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3580 ATAGGTGTGACAGTGAAGCCGGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCATTCC 3653
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3654 CATTGGTGACACGCTACCCCCACGGCAGATTTATGAGCTGTATAATGGTGGCTCAGTGCCCGTGACATATGAGG 3727
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3728 TCCAGACCGATGTCCTGTCACAGGTTCAGGAAAAAAATTTTGATCACCCCATCTTTTGCTGCCTCAACCCCAAA 3801
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3802 GGGGAGATCCAGCCAGGCAGCACTGCCCGGGTCTTGTGGATCTTCTCACCTATCGAGGCCAAGACCTACACGGT 3875
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3876 GGACGTGCCCATACACATCCTGGGATGGAACTCGGCCCTCATCCACTTCCAGGGAGTGGGCTACAACCCCCATA 3949
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3950 TGATGGGGGACACAGCCCCATTCCACAACATCTCCTCGTGGGACAACAGTTCCATACACTCTAGGCTGGTGGTG 4023
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4024 CCTGGACAGAATGTCTTCCTGTCCCAGTCTCATATTTCCCTGGGAAACATACCTGTGCAGAGCAAGTGCAGCCG 4097
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4098 CCTGCTCTTCCTCAACAACATCTCCAAGAACGAGGAAATTGCCTTCTCCTGGCAGCCAAGTCCTCTAGATTTTG 4171
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4172 GGGAGGTGTCTGTGAGTCCCATGATAGGGGTGGTGGCTCCTGAAGAGACGGTCCCATTTGTGGTGACCTTGAGG 4245
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4246 GCCTCTGTGCATGCCAGCTTCTACAGTGCAGACCTGGTATGCAAGCTGTACTCGCAGCAGCTCATGAGGCAGTA 4319
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4320 TCACAAGGAGCTGCAGGAGTGGAAGGACGAGAAGGTGCGGCAGGAAGTGGAGTTCACCATCACCGACATGAAAG 4393
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4394 TGAAGAAGAGAACATGCTGCACAGCCTGTGAACCTGCGAGGAAGTACAAGACACTGCCTCCCATCAAGAACCAG 4467
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4468 CAGTCTGTCAGCCGGCCTGCCAGCTGGAAACTGCAGACCCCAAAGGAGGAGGTGTCCTGGCCCTGCCCCCAGCC 4541
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4542 ACCCTCGCCAGGCATGCTCTGCCTGGGCCTTACTGCCCGAGCCCATGCCACCGACTACTTTCTGGCTAACTTCT 4615
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4616 TCTCAGAGTTTCCCTGCCACTTTTTGCACCGCATGGTGGCTTGCCCAGGCCACTCAGAATGTCATGGCTGCCAC 4689
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4690 AGGGAGCTGCCAAAGAGGAAGGCCCCCAGGGAAGAGTCAGAGACTTCTGAGGAAAAATCCCCTAACAAGTGGGG 4763
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4764 CCCTGTTTCCAAGCAGAAGAAGCAGCTCCTGGTTGACATTCTCACCACAATAATCAGGGGCCTGCTGGAAGACA 4837
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4838 AGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGAGCAG 4911
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4912 TCAACTAAGTTCATGGACCAGAAAAACAGCCTGTACTTAATGCCAATCCTGCCTGTACCCTCCAGCAGCTGGGA 4985
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4986 GGATGGGAAGGGCAAGCAGCCGAAGGAAGACAGACCAGAGCACTATCCAGGGTTGGGAAAGAAGGAAGAGGGGG 5059
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5060 AGGAGGAGAAGGGTGAAGAGGAAGAAGAAGAGTTGGAGGAGGAAGAGGAGGAAGAAGAGGAGACAGAAGAGGAG 5133
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5134 GAGTTGGGCAAGGAGGAGATAGAGGAGAAGGAGGAGGAGAGGGATGAGAAGGAAGAGAAAGTGAGCTGGGCGGG 5207
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5208 CATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAGCTGAATGTCATGG 5281
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5282 TGAAGGAGGAGCAAGAACAGGACGAGAAGGAGGCCATCAGAAGGCTCCCGGCCTTCGCCAACCTGCAGGAGGCG 5355
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5356 CTGCTGGAGAACATGATCCAGAACATCCTGGTGGAGGCGAGCCGCGGGGAGGTGGTACTCACCTCGCGGCCACG 5429
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5430 CGTCATCGCCCTGCCGCCGTTCTGCGTGCCCAGGAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAG 5503
Query 490 ----------------------------------------- 489
Sbjct 5504 AGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCG 5544
