Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14460
- Subject:
- XM_017024477.2
- Aligned Length:
- 3324
- Identities:
- 1125
- Gaps:
- 2196
Alignment
Query 1 ATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCGGTGCCTGCAGGAGGACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGCTAAGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCAT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCAGGAGCATCGCCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TATGAAAATCTAAAATGGACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGAGCTCCAGGATCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TAACCAGGAAGAAGGAAGAGGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGAT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 ACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTA 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 TCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGT 1184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ---------ATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGT 65
Query 1185 GGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66 GGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGG 139
Query 1259 AGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 140 AGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAG 213
Query 1333 TCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGC 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 TCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGC 287
Query 1407 GCTACAGGAGCAGGAGGTGGTGCTGAAGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGC 1480
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 GCTACAGGAGCAGGAGGTGGTGCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGC 361
Query 1481 ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC 435
Query 1555 AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA 509
Query 1629 GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG 583
Query 1703 AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG 657
Query 1777 TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA 731
Query 1851 GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG 805
Query 1925 CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA 879
Query 1999 GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT 953
Query 2073 CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC 1027
Query 2147 TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC 1101
Query 2221 GCCGTGGCCCTTGGGAGAGAGGTGGGTGNCCGC----------------------------------------- 2253
||||||||||||||||||||| |.||.|
Sbjct 1102 GCCGTGGCCCTTGGGAGAGAG------GGCCTCACCAAGAGAGGGCCTATGGAGGCCGAGGACCAGGGGGAGCT 1169
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1170 TTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCACCGACTCCAGAGAAAGCTGAAGG 1243
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1244 AGGCAGCCAGAAAAATCATCAGCCTCCGCCTGGAGAAAGAGCAGCTCATCGAGATGGGGAACAGGCTCCGTGCA 1317
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1318 GAGCTGGGCCGACCCGAAAGGTGGCTGTTGCACCACGCCCTCCCTCCTGCCCCTGAGGCCCGGAAGCCAGGCGA 1391
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1392 GGAGCCCAGGAGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTGCAGCCCCATTTTACATCTCAGGACGCCA 1465
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1466 AGAGTGCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGA 1539
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1540 CTTGACGCCCTGCAAGGCCCGAAGACACAACACAGCATCCACACGGTGACCTGTAAATCACCTCGGCAGAAAGA 1613
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1614 AGACAGGTCCCCAAAGCCACCCCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCT 1687
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1688 CCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCCTTCTGGTGTCACCTCC 1761
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1762 CAGGGTGACTCAACTCCAGAAATGGGGTCTCACTATGTCACCCAGGCTGGTCTCGAACTCCTGGGCTCAAGCAG 1835
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1836 TCCTGCCGCCTTGGCCTCCCAAAGTGCTGAGATGACAGGTGTGGGCCCCACGCCCAGCCTGGCGTGGAGTGGAG 1909
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1910 CCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAGGAATGCGAGGGGGAATG 1983
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1984 AATGGAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGGGCCTCACTGGTCACCATCACAGCAGCCTTGCAG 2057
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2058 TGGGATCAGGACAGTCCTGCTGTCCAGGAAGGAGAGGACCCTGCTCTCTTGTTTCTCACTACCTGCTCCTGTCG 2131
Query 2254 -------------------------------------------------------------------- 2253
Sbjct 2132 TTCTAGTCCCATTGCTGCTCTCAGGACAAGCTGTGACTGAGAGAGCAGGTCACGCTGGTGACATTTTA 2199
