Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14460
Subject:
XM_017024481.1
Aligned Length:
2530
Identities:
1511
Gaps:
1013

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGTGGCTACTCTTCGGCAGTCAGTGGAGGAAGTGAAAAAAAACACGGGGTCACAGGTATTTCTGGAAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCAAACTGTTTTTCCTCTACTCTGATACCACAAGAATCATCAGCACAGAGGAAGACTTCTGTGATCAAATGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGGGAGAGGGAGGTTTTCACCAGCACATGAGCAGTCAGTTCTGCCGCAGACTCGGCGGGTGTCCTTCGGTTCA  222

Query    1  ------------------------------------------------ATGCTGCCACTGGGCTCAGAGCCCGC  26
                                                            ||||||||||||||||||||||||||
Sbjct  223  GTTCCAACACCGCCTGCCTGGAGAGAGGTCAGACCACAGGCGGCCACCATGCTGCCACTGGGCTCAGAGCCCGC  296

Query   27  CCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGG  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGG  370

Query  101  CGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGACTTTGTC  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGACTTTGTC  444

Query  175  TACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGGCCAGGGA  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGGCCAGGGA  518

Query  249  GTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCGCTAGCCA  322
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCGCTAGCCA  592

Query  323  GAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGAG  396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGAG  666

Query  397  CGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACACTGGA  470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACACTGGA  740

Query  471  GAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAATCGAAAA  544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAATCGAAAA  814

Query  545  TGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAG  618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAG  888

Query  619  GTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGCAGAGGGC  692
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGCAGAGGGC  962

Query  693  AGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGATCTGGAGGCCATGA  766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  963  AGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGA  1036

Query  767  GCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGGAAACA  840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGGAAACA  1110

Query  841  TTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGC  914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGC  1184

Query  915  CCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGAGGCGC  988
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGAGGCGC  1258

Query  989  AGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAA  1062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAA  1332

Query 1063  GATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGAGACCT  1136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGAGACCT  1406

Query 1137  TCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAA  1210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAA  1480

Query 1211  GGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTG  1284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTG  1554

Query 1285  GACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGGGTCTGAG  1358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGGGTCTGAG  1628

Query 1359  CATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGA  1432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGA  1702

Query 1433  AGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACA-  1505
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 1703  AGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACAG  1776

Query 1506  ------GATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCC  1573
                  ||||| .|.|.||                                                       
Sbjct 1777  GTTGAGGATGC-GCACCGG-------------------------------------------------------  1794

Query 1574  GAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATT  1647
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 1648  CCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGC  1721
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 1722  CACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGAAAAGC  1795
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 1796  ATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCG  1869
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 1870  ACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATC  1943
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 1944  TGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGC  2017
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 2018  TGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGT  2091
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 2092  GAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGAT  2165
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 2166  AGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGGGAGAG  2239
                                                                                      
Sbjct 1795  --------------------------------------------------------------------------  1794

Query 2240  AGGTGGGTGNCCGC  2253
                          
Sbjct 1795  --------------  1794

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