Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14460
Subject:
XR_001752486.2
Aligned Length:
3323
Identities:
2247
Gaps:
1070

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGTGGCTACTCTTCGGCAGTCAGTGGAGGAAGTGAAAAAAAACACGGGGTCACAGGTATTTCTGGAAAACTCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACTGTTTTTCCTCTACTCTGATACCACAAGAATCATCAGCACAGAGGAAGACTTCTGTGATCAAATGTGGTGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGAGGGAGGTTTTCACCAGCACATGAGCAGTCAGTTCTGCCGCAGACTCGGCGGGTGTCCTTCGGTTCAGTTCC  222

Query    1  -------------------------------------------ATGCTGCCACTGGGCTCAGAGCCCGCCCTGA  31
                                                       |||||||||||||||||||||||||||||||
Sbjct  223  AACACCGCCTGCCTGGAGAGAGGTCAGACCACAGGCGGCCACCATGCTGCCACTGGGCTCAGAGCCCGCCCTGA  296

Query   32  ATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGCT  105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGCT  370

Query  106  CTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGACTTTGTCTACAA  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGACTTTGTCTACAA  444

Query  180  CCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGGCCAGGGAGTGGG  253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGGCCAGGGAGTGGG  518

Query  254  AGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCGCTAGCCAGAGAG  327
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCGCTAGCCAGAGAG  592

Query  328  GCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGAGCGCGT  401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGAGCGCGT  666

Query  402  CCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACACTGGAGAGAA  475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACACTGGAGAGAA  740

Query  476  AACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAATCGAAAATGCGG  549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAATCGAAAATGCGG  814

Query  550  AAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAA  623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAA  888

Query  624  ACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGCAGAGGGCAGAGG  697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGCAGAGGGCAGAGG  962

Query  698  CCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGATCTGGAGGCCATGAGCCGC  771
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  963  CCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGC  1036

Query  772  GCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGGAAACATTTAA  845
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGGAAACATTTAA  1110

Query  846  GAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGCCCACG  919
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGCCCACG  1184

Query  920  TGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGAGGCGCAGCTC  993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGAGGCGCAGCTC  1258

Query  994  CGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAAGATGC  1067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAAGATGC  1332

Query 1068  ATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGAGACCTTCAGA  1141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGAGACCTTCAGA  1406

Query 1142  TTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTAC  1215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTAC  1480

Query 1216  AAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTGGACTG  1289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTGGACTG  1554

Query 1290  GCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGGGTCTGAGCATGG  1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGGGTCTGAGCATGG  1628

Query 1364  CAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAAGGCC  1437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAAGGCC  1702

Query 1438  ATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACAGATGCT  1511
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACAGATGCT  1776

Query 1512  TCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACA  1585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACA  1850

Query 1586  CGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATC  1659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATC  1924

Query 1660  CAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCCACTCCTGATTA  1733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCCACTCCTGATTA  1998

Query 1734  TGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGAAAAGCATCTAGAAGATG  1807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGAAAAGCATCTAGAAGATG  2072

Query 1808  TGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACT  1881
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACT  2146

Query 1882  GGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGG  1955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGG  2220

Query 1956  CCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACACGAC  2029
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACACGAC  2294

Query 2030  TCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGTGAGGTGGACCAG  2103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  TCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGTGAGGTGGACCAG  2368

Query 2104  GTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACGG  2177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  GTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACGG  2442

Query 2178  GGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGGGAGAGA-GGTGGGTG--  2248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||.||  
Sbjct 2443  GGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGGGAGAGAGGGTGGCTGTT  2516

Query 2249  --NCCGC-------------------------------------------------------------------  2253
              .||.|                                                                   
Sbjct 2517  GCACCACGCCCTCCCTCCTGCCCCTGAGGCCCGGAAGCCAGGCGAGGAGCCCAGGAGGCCTTTGGATCGCAGCC  2590

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2591  CACCTTTGGGACAGGTGCAGCCCCATTTTACATCTCAGGACGCCAAGAGTGCCGAGGATGAGGCTCCTTCCAGA  2664

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2665  CACTTGGGAAAGCACCAGCCCCGCTCAGCACAGACACAACACAGCATCCACACGGTGACCTGTAAATCACCTCG  2738

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2739  GCAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACA  2812

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2813  GCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCCTTCTGGT  2886

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2887  GTCACCTCCCAGGGTGACTCAACTCCAGAGCTCCCAGCTCCTCCAGCAGCCGACAGGAGGCCCGTCAAGATGCA  2960

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2961  GGCAGGCATTGCCACCCCAGGGATGAAGACAGCAGCCCAGGCAAAGGCCAAGACCACAGGAGCCTCCCGGTCTC  3034

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 3035  ATCCTGCAAAAGCTAAAGGCTGCCAGAGGCCCCCCAAGATCCGTAACTACAACATTATGGACTGACTTCCTCCC  3108

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 3109  CCCACCCCGCCCCACTAAGGGGTGCTCGGGGCCTCCGCATGGTGCCTGTGCTTTCACCTACGTGTTGTGGGGGG  3182

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 3183  GTGTGGGCACAGCGTGCAGGGTGGAGGCAGGGAGCTGCAGGGCAGGCTCCCAAATGCTGCTGAGGCGACCCTGC  3256

Query 2254  -------------------------------------------------------------------  2253
                                                                               
Sbjct 3257  TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGGGCGTCTGCTTGGC  3323

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