Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14460
- Subject:
- XR_001752492.1
- Aligned Length:
- 2528
- Identities:
- 1448
- Gaps:
- 1077
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAGAAATGGCTGTGGCTACTCTTCGGCAGTCAGTGGAGGAAGTGAAAAAAAACACGGGGTCACAGGTATTTCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAAACTCAAACTGTTTTTCCTCTACTCTGATACCACAAGAATCATCAGCACAGAGGAAGACTTCTGTGATCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGTGGTGGGAGAGGGAGGTTTTCACCAGCACATGAGCAGTCAGTTCTGCCGCAGACTCGGCGGGTGTCCTTCG 222
Query 1 -----------------------------------------------------ATGCTGCCACTGGGCTCAGAG 21
|||||||||||||||||||||
Sbjct 223 GTTCAGTTCCAACACCGCCTGCCTGGAGAGAGGTCAGACCACAGGCGGCCACCATGCTGCCACTGGGCTCAGAG 296
Query 22 CCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCA 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCA 370
Query 96 GGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGACT 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGACT 444
Query 170 TTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGGCC 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGGCC 518
Query 244 AGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCGCT 317
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGGGAGTGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCGCT 592
Query 318 AGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGC 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGC 666
Query 392 TGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACA 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACA 740
Query 466 CTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAATC 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAATC 814
Query 540 GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGC 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGC 888
Query 614 TTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGCAG 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGCAG 962
Query 688 AGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGATCTGGAGGC 761
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 963 AGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGC 1036
Query 762 CATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGG 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGG 1110
Query 836 AAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAG 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAG 1184
Query 910 GGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGA 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGA 1258
Query 984 GGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTC 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTC 1332
Query 1058 GTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGA 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGA 1406
Query 1132 GACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACAT 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACAT 1480
Query 1206 TGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGG 1279
||||
Sbjct 1481 TGAA---------------------------------------------------------------------- 1484
Query 1280 GCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGGGT 1353
Sbjct 1485 -------------------------------------------------------------------------- 1484
Query 1354 CTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGT 1427
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1485 -------------------AGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGT 1539
Query 1428 GCTGAAGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGG 1501
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1540 GCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGG 1613
Query 1502 CACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGA 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1614 CACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGA 1687
Query 1576 GAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCC 1649
|||||||||||||||||||||||||||||||||||||||
Sbjct 1688 GAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATG----------------------------------- 1726
Query 1650 TCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCCA 1723
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 1724 CTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGAAAAGCAT 1797
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 1798 CTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGAC 1871
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 1872 AGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTG 1945
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 1946 TCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTG 2019
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 2020 GTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGTGA 2093
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 2094 GGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAG 2167
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 2168 CCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGGGAGAGAG 2241
Sbjct 1727 -------------------------------------------------------------------------- 1726
Query 2242 GTGGGTGNCCGC 2253
Sbjct 1727 ------------ 1726
