Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14482
- Subject:
- XM_011509494.2
- Aligned Length:
- 3333
- Identities:
- 1308
- Gaps:
- 2022
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCAGTGCTGAGATAATTGGTTCTACAAATCTTATAATTCTGCTAGAGGATGAAGTCTTTGCCGATTTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAACACATTTCTTTCCCTCCCGGTTTTTGGTCAGACACCATTTTATACTGTTGAAAATTCACAGTGGAGCTTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCAGAAATACCTTGTAACTTGATTGCCAAATACAAAGGGTTATTGACCTGGTTGGAAAAATGCCGATTACCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCTTCTGTAAAACAAACTTGTGTTTCCATTACATTCTCTGTCAGGAGTTCATCAGTTTCATTAAGTCCCCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAGCCAAGATGATGAGATGGAAAAAGGCAGACCAGTGGCTACTCCAGAAATGCATTGGCGGGGTCAGAGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTGGCGCTTCTATTCCTACCTCACAGGCAGTGCAGGTGAAGAATTGGTGGATTTCTGGATCCTTGCTGAGAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCCTGAGCATAGATGAGATGGACCTGGAAGTGAGAGACTACTACCTGTCCCTCCTCCTCATGCTGAGGGCCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCATCTGCAGGAGGGCTCCAGGGTGGTAACCCTCTGTAACATGAACATCAAGTCCCTCCTGAACCTCTCCATCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCATCCCAACCAATCAACCACTAGGAGGGAGATCCTGAGCCACATGCAGAAAGTGGCTCTGTTCAAACTCCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCTATTGGCTTCCCAACTTTTACACCCACACCAAGATGACCATGGCCAAGGAGGAAGCATGCCATGGTCTGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAAGAGTACGAGACTCGCTTATACAGCGTTTGCTACACCCACATAGGAGGGCTCCCTCTGAACATGAGCATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAAGTGCCACCACTTTCAGAAACGGTACTCAAGCAGGAAAGCCAAGAGGAAGATGTGGCAATTGGTAGATCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACTCTTGGTCTCTGGAAATGGATCTCAAGCCAGATGCTATTGGTATGCCCCTACAGGAGACATGTCCTCAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGGTGGTTATACAAATGCCTTCCCTGAAAATGGCTTCTTCAAAGGAAACAAGAATCAGTTCCCTGGAAAAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATATGCATTATGCAAAAATATCCAGCATGGAGAATAAAGCCAAGAGCCACCTCCACATGGAAGCCCCCTTTGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACAAAGGTCTCTACCCACCTGAGGACTGTCATCCCCATTGTCAATCACTCCTCCAAGATGACAATTCAGAAGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATCAAGCAAAGCTTCTCCTTAGGATACATCCACTTGGCCTTGTGTGCTGATGCCTGTGCAGGGAACCCTTTCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGACCACCTGAAGAAGCTGAATTTGAAAGTGGAGATCCAACTTCTTGACCTCTGGCAGGACTTGCAGCATTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCAGTGTCCTTCTGAATAACAAAAAGAATGGGAATGCAATCTTTCGTCACTTGCTGGGTGACAGAATCTGCGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTCTACCTGAATGAGCAGATTGGTCCGTGCTTACCACTCAAATCCCAAACCATTCAGGGCCTGAAGGAACTAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGCCCTCTGGGGATGTGATCCCCTGGATTCCCAAAGCCCAGAAGGAGATTTGCAAGATGCTCAGTCCCTGGTAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATGAGTTTCTAGATGAAGAGGACTACTGGTTTCTCCTTTTTACGACACAGAACAGGTTCATCAGCTCCAGACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCATAAAAGAGAATTTATAGGCAAAGAAGAGAACATTCTTCTTTATAAGAGGATTCAGCAGTCTCTAGAGTTAA 1702
Query 1 --------------------------ATGGACTATAGGCAGTGGCGAAAGATAGCTACTGAGGACCTGAAGCAA 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GCCAGGCTTTGGCTGACATGAAGGAAATGGACTATAGGCAGTGGCGAAAGATAGCTACTGAGGACCTGAAGCAA 1776
Query 49 GGAGGCTCTCTCCAGGTAGAGCTGACATCTCCAGTGTTTCTAACAGACATAACTAAAATGTCCTTTGAGGAGCT 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGAGGCTCTCTCCAGGTAGAGCTGACATCTCCAGTGTTTCTAACAGACATAACTAAAATGTCCTTTGAGGAGCT 1850
Query 123 TTGCTACAAGAACCCAAAGATGGCCATACAGAAGATCAGTGATGACTACAAAATATACTGTGAGAAAGCACCTA 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TTGCTACAAGAACCCAAAGATGGCCATACAGAAGATCAGTGATGACTACAAAATATACTGTGAGAAAGCACCTA 1924
Query 197 AAATAGATTTTAAAATGGAAATTATCAAGGAAACAAAGACAGTTTCACGCTCAAATAGGAAAATGTCCTTGCTC 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AAATAGATTTTAAAATGGAAATTATCAAGGAAACAAAGACAGTTTCACGCTCAAATAGGAAAATGTCCTTGCTC 1998
Query 271 AAAAGAACTCTTGTAAGGAAGCCATCAATGAGACCCAGAAACTTGACAGAAGTCCTCTTAAATACACAGCACTT 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AAAAGAACTCTTGTAAGGAAGCCATCAATGAGACCCAGAAACTTGACAGAAGTCCTCTTAAATACACAGCACTT 2072
Query 345 GGAGTTCTTCATGGAGTTCCTCAAGGAACGGAAGGCTAAAATCCCATTGCAATTTCTCACAGCTGTACAGAAGA 418
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGAGTTCTTCAGGGAGTTCCTCAAGGAACGGAAGGCTAAAATCCCATTGCAATTTCTCACAGCTGTACAGAAGA 2146
Query 419 TCAGTGTAGAGACCAATGAAAAGATTTGCAAGTCTCTCATAGAAAATGTAATCAAGACTTTCTTCCAAGGCCAA 492
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCAGTATAGAGACCAATGAAAAGATTTGCAAGTCTCTCATAGAAAATGTAATCAAGACTTTCTTCCAAGGCCAA 2220
Query 493 CTCTCTCCTGAAGAAATGCTGCAGTGTGATGCCCCTATTATCAAAGAAATCGCTTCCATGCGTCATGTCACCAC 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CTCTCTCCTGAAGAAATGCTGCAGTGTGATGCCCCTATTATCAAAGAAATCGCTTCCATGCGTCATGTCACCAC 2294
Query 567 AAGCACACTGTTAACGCTCCAGGGACATGTTATGAAATCTATAGAAGAAAAGTGGTTTAAAGATTATCAAGACC 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AAGCACACTGTTAACGCTCCAGGGACATGTTATGAAATCTATAGAAGAAAAGTGGTTTAAAGATTATCAAGACC 2368
Query 641 TGTTCCCACCTCACCATCAGGAGGTGGAAGTGCAAAGTGAAGTACAAATTTCGTCTAGGAAGCCCTCAAAGATA 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGTTCCCACCTCACCATCAGGAGGTGGAAGTGCAAAGTGAAGTACAAATTTCGTCTAGGAAGCCCTCAAAGATA 2442
Query 715 GTGTCAACTTACCTACAGGAATCCCAGAAGAAAGGCTGGATGAGAATGATCAGCTTTATCAGGAGTTTTTGCAA 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GTGTCAACTTACCTACAGGAATCCCAGAAGAAAGGCTGGATGAGAATGATCAGCTTTATCAGGAGTTTTTGCAA 2516
Query 789 GTACCGCAGATTTATGTTGAATCCTAGTAAGCGCCAGGAATTTGAAGACTATCTTCACCAGGAAATGCAAAATA 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GTACCGCAGATTTATGTTGAATCCTAGTAAGCGCCAGGAATTTGAAGACTATCTTCACCAGGAAATGCAAAATA 2590
Query 863 GCAAGGAAAATTTCACCACAGCACACAACACATCGGGACGTTCAGCTCCACCCTCCACAAATGTCCGGAGTGCA 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GCAAGGAAAATTTCACCACAGCACACAACACATCGGGACGTTCAGCTCCACCCTCCACAAATGTCCGGAGTGCA 2664
Query 937 GACCAAGAGAATGGAGAAATAACCCTTGTAAAGCGTCGTATATTTGGCCACAGGATTATCACTGTCAACTTTGC 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GACCAAGAGAATGGAGAAATAACCCTTGTAAAGCGTCGTATATTTGGCCACAGGATTATCACTGTCAACTTTGC 2738
Query 1011 GATCAATGATCTATATTTCTTTTCTGAAATGGAGAAATTTAATGATCTGGTCAGTTCAGCCCACATGCTGCAGG 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GATCAATGATCTATATTTCTTTTCTGAAATGGAGAAATTTAATGATCTGGTCAGTTCAGCCCACATGCTGCAGG 2812
Query 1085 TCAACCGGGCATATAATGAGAATGATGTGATCCTAATGCGGTCCAAAATGAACATTATCCAAAAACTCTTCCTG 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TCAACCGGGCATATAATGAGAATGATGTGATCCTAATGCGGTCCAAAATGAACATTATCCAAAAACTCTTCCTG 2886
Query 1159 AATTCTGACATCCCTCCAAAGCTGAGGGTGAATGTCCCTGAGTTCCAGAAGGATGCCATCCTTGCTGCCATCAC 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 AATTCTGACATCCCTCCAAAGCTGAGGGTGAATGTCCCTGAGTTCCAGAAGGATGCCATCCTTGCTGCCATCAC 2960
Query 1233 AGAGGGCTACCTAGATCGGAGCGTCTTCCATGGGGCTATCATGTCTGTCTTCCCCGTTGTTATGTACTTCTGGA 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 AGAGGGCTACCTAGATCGGAGCGTCTTCCATGGGGCTATCATGTCTGTCTTCCCCGTTGTTATGTACTTCTGGA 3034
Query 1307 AAAGGTTTTGTTTCTGGAAGGCAACCCGCTCTTACTTACAGTATAGGGGGAAGAAGTTCAAGGACAGAAAAAGC 1380
||||.
Sbjct 3035 AAAGA--------------------------------------------------------------------- 3039
Query 1381 CCTCCTAAATCTACGGACAAGTATCCTTTCTCGAGTGGAGGAGACAATGCCATCTTAAGGTTCACCTTGCTCAG 1454
Sbjct 3040 -------------------------------------------------------------------------- 3039
Query 1455 AGGTATTGAGTGGTTGCAGCCTCAACGGGAAGCAATAAGTTCAGTTCAAAATTCTTCATCAAGCAAACTTACTC 1528
Sbjct 3040 -------------------------------------------------------------------------- 3039
Query 1529 AGCCAAGACTCGTGGTATCTGCCATGCAGCTGCATCCCGTCCAGGGACAAAAATTATCCTACATCAAAAAAGAG 1602
Sbjct 3040 -------------------------------------------------------------------------- 3039
Query 1603 AAG 1605
Sbjct 3040 --- 3039
