Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14482
- Subject:
- XM_017001194.1
- Aligned Length:
- 3027
- Identities:
- 1603
- Gaps:
- 1422
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGAGATGGAAAAAGGCAGACCAGTGGCTACTCCAGAAATGCATTGGCGGGGTCAGAGGGATGTGGCGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTATTCCTACCTCACAGGCAGTGCAGGTGAAGAATTGGTGGATTTCTGGATCCTTGCTGAGAACATCCTGAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGATGAGATGGACCTGGAAGTGAGAGACTACTACCTGTCCCTCCTCCTCATGCTGAGGGCCACTCATCTGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGGCTCCAGGGTGGTAACCCTCTGTAACATGAACATCAAGTCCCTCCTGAACCTCTCCATCTGGCATCCCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAATCAACCACTAGGAGGGAGATCCTGAGCCACATGCAGAAAGTGGCTCTGTTCAAACTCCAGAGCTATTGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCCCAACTTTTACACCCACACCAAGATGACCATGGCCAAGGAGGAAGCATGCCATGGTCTGATGCAAGAGTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGACTCGCTTATACAGCGTTTGCTACACCCACATAGGAGGGCTCCCTCTGAACATGAGCATCAAGAAGTGCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCACTTTCAGAAACGGTACTCAAGCAGGAAAGCCAAGAGGAAGATGTGGCAATTGGTAGATCCTGACTCTTGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCTGGAAATGGATCTCAAGCCAGATGCTATTGGTATGCCCCTACAGGAGACATGTCCTCAAGAGAAGGTGGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATACAAATGCCTTCCCTGAAAATGGCTTCTTCAAAGGAAACAAGAATCAGTTCCCTGGAAAAGGATATGCATTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCAAAAATATCCAGCATGGAGAATAAAGCCAAGAGCCACCTCCACATGGAAGCCCCCTTTGAGACAAAGGTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTACCCACCTGAGGACTGTCATCCCCATTGTCAATCACTCCTCCAAGATGACAATTCAGAAGGCCATCAAGCAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCTTCTCCTTAGGATACATCCACTTGGCCTTGTGTGCTGATGCCTGTGCAGGGAACCCTTTCCGGGACCACCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGAAGCTGAATTTGAAAGTGGAGATCCAACTTCTTGACCTCTGGCAGGACTTGCAGCATTTCCTCAGTGTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTCTGAATAACAAAAAGAATGGGAATGCAATCTTTCGTCACTTGCTGGGTGACAGAATCTGCGAGCTCTACCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGAGCAGATTGGTCCGTGCTTACCACTCAAATCCCAAACCATTCAGGGCCTGAAGGAACTATTGCCCTCTGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGATGTGATCCCCTGGATTCCCAAAGCCCAGAAGGAGATTTGCAAGATGCTCAGTCCCTGGTATGATGAGTTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAGATGAAGAGGACTACTGGTTTCTCCTTTTTACGACACAGAACAGGTTCATCAGCTCCAGACAGCATAAAAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAATTTATAGGCAAAGAAGAGAACATTCTTCTTTATAAGAGGATTCAGCAGTCTCTAGAGTTAAGCCAGGCTTT 1406
Query 1 ----------------ATGGACTATAGGCAGTGGCGAAAGATAGCTACTGAGGACCTGAAGCAAGGAGGCTCTC 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGCTGACATGAAGGAAATGGACTATAGGCAGTGGCGAAAGATAGCTACTGAGGACCTGAAGCAAGGAGGCTCTC 1480
Query 59 TCCAGGTAGAGCTGACATCTCCAGTGTTTCTAACAGACATAACTAAAATGTCCTTTGAGGAGCTTTGCTACAAG 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCCAGGTAGAGCTGACATCTCCAGTGTTTCTAACAGACATAACTAAAATGTCCTTTGAGGAGCTTTGCTACAAG 1554
Query 133 AACCCAAAGATGGCCATACAGAAGATCAGTGATGACTACAAAATATACTGTGAGAAAGCACCTAAAATAGATTT 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AACCCAAAGATGGCCATACAGAAGATCAGTGATGACTACAAAATATACTGTGAGAAAGCACCTAAAATAGATTT 1628
Query 207 TAAAATGGAAATTATCAAGGAAACAAAGACAGTTTCACGCTCAAATAGGAAAATGTCCTTGCTCAAAAGAACTC 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TAAAATGGAAATTATCAAGGAAACAAAGACAGTTTCACGCTCAAATAGGAAAATGTCCTTGCTCAAAAGAACTC 1702
Query 281 TTGTAAGGAAGCCATCAATGAGACCCAGAAACTTGACAGAAGTCCTCTTAAATACACAGCACTTGGAGTTCTTC 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTGTAAGGAAGCCATCAATGAGACCCAGAAACTTGACAGAAGTCCTCTTAAATACACAGCACTTGGAGTTCTTC 1776
Query 355 ATGGAGTTCCTCAAGGAACGGAAGGCTAAAATCCCATTGCAATTTCTCACAGCTGTACAGAAGATCAGTGTAGA 428
|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1777 AGGGAGTTCCTCAAGGAACGGAAGGCTAAAATCCCATTGCAATTTCTCACAGCTGTACAGAAGATCAGTATAGA 1850
Query 429 GACCAATGAAAAGATTTGCAAGTCTCTCATAGAAAATGTAATCAAGACTTTCTTCCAAGGCCAACTCTCTCCTG 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GACCAATGAAAAGATTTGCAAGTCTCTCATAGAAAATGTAATCAAGACTTTCTTCCAAGGCCAACTCTCTCCTG 1924
Query 503 AAGAAATGCTGCAGTGTGATGCCCCTATTATCAAAGAAATCGCTTCCATGCGTCATGTCACCACAAGCACACTG 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AAGAAATGCTGCAGTGTGATGCCCCTATTATCAAAGAAATCGCTTCCATGCGTCATGTCACCACAAGCACACTG 1998
Query 577 TTAACGCTCCAGGGACATGTTATGAAATCTATAGAAGAAAAGTGGTTTAAAGATTATCAAGACCTGTTCCCACC 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TTAACGCTCCAGGGACATGTTATGAAATCTATAGAAGAAAAGTGGTTTAAAGATTATCAAGACCTGTTCCCACC 2072
Query 651 TCACCATCAGGAGGTGGAAGTGCAAAGTGAAGTACAAATTTCGTCTAGGAAGCCCTCAAAGATAGTGTCAACTT 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TCACCATCAGGAGGTGGAAGTGCAAAGTGAAGTACAAATTTCGTCTAGGAAGCCCTCAAAGATAGTGTCAACTT 2146
Query 725 ACCTACAGGAATCCCAGAAGAAAGGCTGGATGAGAATGATCAGCTTTATCAGGAGTTTTTGCAAGTACCGCAGA 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ACCTACAGGAATCCCAGAAGAAAGGCTGGATGAGAATGATCAGCTTTATCAGGAGTTTTTGCAAGTACCGCAGA 2220
Query 799 TTTATGTTGAATCCTAGTAAGCGCCAGGAATTTGAAGACTATCTTCACCAGGAAATGCAAAATAGCAAGGAAAA 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTTATGTTGAATCCTAGTAAGCGCCAGGAATTTGAAGACTATCTTCACCAGGAAATGCAAAATAGCAAGGAAAA 2294
Query 873 TTTCACCACAGCACACAACACATCGGGACGTTCAGCTCCACCCTCCACAAATGTCCGGAGTGCAGACCAAGAGA 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TTTCACCACAGCACACAACACATCGGGACGTTCAGCTCCACCCTCCACAAATGTCCGGAGTGCAGACCAAGAGA 2368
Query 947 ATGGAGAAATAACCCTTGTAAAGCGTCGTATATTTGGCCACAGGATTATCACTGTCAACTTTGCGATCAATGAT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATGGAGAAATAACCCTTGTAAAGCGTCGTATATTTGGCCACAGGATTATCACTGTCAACTTTGCGATCAATGAT 2442
Query 1021 CTATATTTCTTTTCTGAAATGGAGAAATTTAATGATCTGGTCAGTTCAGCCCACATGCTGCAGGTCAACCGGGC 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CTATATTTCTTTTCTGAAATGGAGAAATTTAATGATCTGGTCAGTTCAGCCCACATGCTGCAGGTCAACCGGGC 2516
Query 1095 ATATAATGAGAATGATGTGATCCTAATGCGGTCCAAAATGAACATTATCCAAAAACTCTTCCTGAATTCTGACA 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 ATATAATGAGAATGATGTGATCCTAATGCGGTCCAAAATGAACATTATCCAAAAACTCTTCCTGAATTCTGACA 2590
Query 1169 TCCCTCCAAAGCTGAGGGTGAATGTCCCTGAGTTCCAGAAGGATGCCATCCTTGCTGCCATCACAGAGGGCTAC 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TCCCTCCAAAGCTGAGGGTGAATGTCCCTGAGTTCCAGAAGGATGCCATCCTTGCTGCCATCACAGAGGGCTAC 2664
Query 1243 CTAGATCGGAGCGTCTTCCATGGGGCTATCATGTCTGTCTTCCCCGTTGTTATGTACTTCTGGAAAAGGTTTTG 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CTAGATCGGAGCGTCTTCCATGGGGCTATCATGTCTGTCTTCCCCGTTGTTATGTACTTCTGGAAAAGGTTTTG 2738
Query 1317 TTTCTGGAAGGCAACCCGCTCTTACTTACAGTATAGGGGGAAGAAGTTCAAGGACAGAAAAAGCCCTCCTAAAT 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TTTCTGGAAGGCAACCCGCTCTTACTTACAGTATAGGGGGAAGAAGTTCAAGGACAGAAAAAGCCCTCCTAAAT 2812
Query 1391 CTACGGACAAGTATCCTTTCTCGAGTGGAGGAGACAATGCCATCTTAAGGTTCACCTTGCTCAGAGGTATTGAG 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CTACGGACAAGTATCCTTTCTCGAGTGGAGGAGACAATGCCATCTTAAGGTTCACCTTGCTCAGAGGTATTGAG 2886
Query 1465 TGGTTGCAGCCTCAACGGGAAGCAATAAGTTCAGTTCAAAATTCTTCATCAAGCAAACTTACTCAGCCAAGACT 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TGGTTGCAGCCTCAACGGGAAGCAATAAGTTCAGTTCAAAATTCTTCATCAAGCAAACTTACTCAGCCAAGACT 2960
Query 1539 CGTGGTATCTGCCATGCAGCTGCATCCCGTCCAGGGACAAAAATTATCCTACATCAAAAAAGAGAAG 1605
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CGTGGTATCTGCCATGCAGCTGCATCCCGTCCAGGGACAAAAATTATCCTACATCAAAAAAGAGAAG 3027
