Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14564
- Subject:
- NM_177407.4
- Aligned Length:
- 1522
- Identities:
- 1151
- Gaps:
- 101
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||.|||| |.|||||||||||.|||||.||.|||||||||||||..|||||..|.||.|||||.||.||
Sbjct 1 ATGGCTACCA---TCACCTGCACCCGATTCACAGAAGAGTACCAGCTCTTTGAGGAACTGGGAAAGGGAGCCTT 71
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAG 147
|||||||||.||..|.|||||.|||.| ||| .|.||.||.||||||||.||||||||.|||||||||||||||
Sbjct 72 CTCTGTGGTGCGCAGGTGTGTGAAGGTGCTG-GCTGGTCAGGAGTATGCTGCCAAGATTATCAACACCAAGAAG 144
Query 148 CTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGT 221
||.|||||||||||||||||||||||||||.|.|||||.||.|||||||||.|..|||||||..||||.|||||
Sbjct 145 CTTTCAGCCAGAGATCACCAGAAGCTGGAGCGTGAGGCCCGCATCTGCCGCTTGTTGAAGCACCCCAATATCGT 218
Query 222 GCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCT 295
.||.|||||.||||||||||||||||||||...|||||||||..|||||||||||||.|||||||||||.||.|
Sbjct 219 CCGACTCCATGACAGCATCTCCGAGGAGGGGCACCACTACCTTATCTTCGATCTGGTTACTGGTGGGGAACTGT 292
Query 296 TTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCC 369
||||||||||||||||..|.|||||.|||||.||.|||||||||||.||||||||||||||||||.|||||||.
Sbjct 293 TTGAAGACATTGTGGCCCGGGAGTATTACAGTGAAGCTGATGCCAGCCACTGTATCCAGCAGATCTTGGAGGCT 366
Query 370 GTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG 443
||.||.||.||||||||.||||||||.||.||..|.|||||.|||||.|||||.|||.|.||||||...|||..
Sbjct 367 GTGCTACACTGTCACCAGATGGGGGTGGTGCATCGTGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCGAAGCT 440
Query 444 CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG 517
|||.||.|||||.|||||||||||||||||.|||||.||.||.||||||.|||||||.||||||||||||||||
Sbjct 441 CAAGGGCGCTGCTGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTG 514
Query 518 GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC 591
|.|||||.||.|||||.||.|||||.|||||.||.||.||..|.||.||..||||.||.|||||.||||||.|.
Sbjct 515 GGTTCGCAGGGACACCTGGATACCTCTCCCCAGAAGTGCTGAGGAAGGACCCGTACGGGAAGCCCGTGGACCTG 588
Query 592 TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT 665
|||||.|||||.||.||||||||.|||.||||.||.||.||.||.||.||||||||.||.||||||||....||
Sbjct 589 TGGGCCTGTGGCGTCATCCTGTATATCTTGCTGGTTGGGTATCCCCCGTTCTGGGATGAAGACCAGCATCGCCT 662
Query 666 GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA 739
|||||||||||||||.||||||||||||||.|||||.||.||.||.||||||||||||||.||.||||||||..
Sbjct 663 GTACCAGCAGATCAAAGCTGGTGCCTATGATTTCCCATCACCAGAATGGGACACCGTCACCCCAGAAGCCAAGG 736
Query 740 ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG 813
|.||.|||||..|||||||||||||||||||..||||.||||||||.|||..||||||.||.||||||||.|||
Sbjct 737 ATCTGATCAATAAGATGCTGACCATCAACCCGTCCAAACGCATCACGGCCGCTGAGGCTCTCAAGCACCCATGG 810
Query 814 GTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATG 886
.|||..||.||||||||.||.||.||| || |||||||||||||||||.|||||.||.|||||.||||||||||
Sbjct 811 ATCTCGCACCGCTCCACCGTGGCCTCC-TGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATG 883
Query 887 CCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTA 960
|||||||.||.||.||||||||||||||||||||.|||||||||||..||||.|||||.|.||..|||||...|
Sbjct 884 CCAGGAGGAAACTGAAGGGAGCCATCCTCACCACTATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAGCGGA 957
Query 961 CTCAACAAGAAAGCA-GATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCA 1033
...|||||| |||.| |||||.||.||
Sbjct 958 GGAAACAAG-AAGAACGATGGTGTGAA----------------------------------------------- 983
Query 1034 AAGGGACGCTTCCTCCTGCCGCCCTGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAA 1107
|||.||||||||.||..||||.||||||||.|||||.||||||.|.|||
Sbjct 984 -------------------------GGAATCTTCTGAGAGCACCAACACCACCATTGAGGACGAAGACACCAAA 1032
Query 1108 GCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTA 1181
|..||.||.|||||.||.||.||....||.||||||||.|||||.|||.|.|.|||.||.|||||||||.||||
Sbjct 1033 GTGCGCAAACAGGAAATTATCAAAGTGACAGAGCAGCTGATCGAAGCCATAAGCAATGGAGACTTTGAGTCCTA 1106
Query 1182 CGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACT 1255
|.||||.||.||.|||||.||..||||..|.|||||.||.||.||.|||||.||||||||.||.||..||||||
Sbjct 1107 CACGAAGATGTGCGACCCTGGAATGACAGCCTTTGAACCAGAGGCCCTGGGGAACCTGGTGGAGGGCCTGGACT 1180
Query 1256 TCCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACA 1328
|.||..|||||||.||.||.|||||| ||| ||..||||||||||||..|.|||||.||||||||||||||.||
Sbjct 1181 TTCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAACCCTCA 1253
Query 1329 CGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCC 1402
|.|.|||.|.||.||.||.||..|.|||||||||||.||.|||||..||||.||||||.|.|| .||||| |
Sbjct 1254 CATCCACCTGATGGGTGACGAGTCAGCCTGCATCGCCTATATCCGCATCACTCAGTACCTGGA--TGCAGG--C 1323
Query 1403 GG----CCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCA 1472
|| ||||||||...||||||.||||||||||||||.|||||||||.|.||||||||.|||||||.|||.||
Sbjct 1324 GGCATACCCCGCACGGCCCAGTCAGAGGAGACCCGCGTCTGGCACCGCAGGGACGGCAAATGGCAGATCGTCCA 1397
Query 1473 CTTCCACTGCTCGGGCGCGCCTGTGGCCCCG--CTGCAG--- 1509
|||||||.|.||.||.||||| |.||| ||||.|
Sbjct 1398 CTTCCACAGATCTGGGGCGCC-----CTCCGTCCTGCCGCAT 1434