Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14649
- Subject:
- XM_017010655.2
- Aligned Length:
- 1470
- Identities:
- 866
- Gaps:
- 561
Alignment
Query 1 ATGGGCTGTGTGCAATGTAAGGATAAAGAAGCAACAAAACTGACGGAGGAGAGGGACGGCAGCCTGAACCAGAG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGCTGTGTGCAATGTAAGGATAAAGAAGCAACAAAACTGACGGAGGAGAGGGACGGCAGCCTGAACCAGAG 74
Query 75 CTCTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCCAGCTTCGGTGTGACCTCCATCCCCAACT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCCAGCTTCGGTGTGACCTCCATCCCCAACT 148
Query 149 ACAACAACTTCCACGCAGCCGGGGGCCAAGGACTCACCGTCTTTGGAGGTGTGAACTCTTCGTCTCATACGGGG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACAACAACTTCCACGCAGCCGGGGGCCAAGGACTCACCGTCTTTGGAGGTGTGAACTCTTCGTCTCATACGGGG 222
Query 223 ACCTTGCGTACGAGAGGAGGAACAGGAGTGACACTCTTTGTGGCCCTTTATGACTATGAAGCACGGACAGAAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCTTGCGTACGAGAGGAGGAACAGGAGTGACACTCTTTGTGGCCCTTTATGACTATGAAGCACGGACAGAAGA 296
Query 297 TGACCTGAGTTTTCACAAAGGAGAAAAATTTCAAATATTGAACAGCTCGGAAGGAGATTGGTGGGAAGCCCGCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGACCTGAGTTTTCACAAAGGAGAAAAATTTCAAATATTGAACAGCTCGGAAGGAGATTGGTGGGAAGCCCGCT 370
Query 371 CCTTGACAACTGGAGAGACAGGTTACATTCCCAGCAATTATGTGGCTCCAGTTGACTCTATCCAGGCAGAAGAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTTGACAACTGGAGAGACAGGTTACATTCCCAGCAATTATGTGGCTCCAGTTGACTCTATCCAGGCAGAAGAG 444
Query 445 TGGTACTTTGGAAAACTTGGCCGAAAAGATGCTGAGCGACAGCTATTGTCCTTTGGAAACCCAAGAGGTACCTT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGTACTTTGGAAAACTTGGCCGAAAAGATGCTGAGCGACAGCTATTGTCCTTTGGAAACCCAAGAGGTACCTT 518
Query 519 TCTTATCCGCGAGAGTGAAACCACCAAAGGTGCCTATTCACTTTCTATCCGTGATTGGGATGATATGAAAGGAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCTTATCCGCGAGAGTGAAACCACCAAAGGTGCCTATTCACTTTCTATCCGTGATTGGGATGATATGAAAGGAG 592
Query 593 ACCATGTCAAACATTATAAAATTCGCAAACTTGACAATGGTGGATACTACATTACCACCCGGGCCCAGTTTGAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCATGTCAAACATTATAAAATTCGCAAACTTGACAATGGTGGATACTACATTACCACCCGGGCCCAGTTTGAA 666
Query 667 ACACTTCAGCAGCTTGTACAACATTACTCAGGTACCTGGAATGGAAACACAAAAGTAGC--CATAAAGACTCTT 738
||||||||||||||||||||||||||||||| |.|| ||| | |.|.||||
Sbjct 667 ACACTTCAGCAGCTTGTACAACATTACTCAG--------------------AGAG-AGCTGC---AGGTCTCT- 715
Query 739 AAACCAGGCACAATGTCCCCCGAATCATTCCTTGAGGAAGCGCAGATCATGAAGAAGCTGAAGCACGACAA-GC 811
|| || ||.||.|.|..||||.|| |||..||| |.|.|.||| ||
Sbjct 716 -------GC----TG-CCGCCTAGTAGTTCCCTG------------TCACAAAG--------GGATGCCAAGGC 757
Query 812 TGGTCCAGCTCTATGCAGTGGTGTCTGAGGAGCCCATCTACATCGTCACCGAGTATATGAACAAAGGAAGTTTA 885
| |.|.|.|| ||||| |||| .|||.||.||.||
Sbjct 758 T--TACCGATC----------TGTCT------------------GTCA----------AAACCAAAGATGT--- 788
Query 886 CTGGATTTCTTAAAAGA------TGGAGAAGGAAGAGCTCTGAAATT-ACCAA-ATCTTGTGGACATGGCAGCA 951
|||| || |.|||| |.|.|||.|.|| |.||| |...|| |||.|||| |||
Sbjct 789 CTGG-----------GAAATCCCTCGAGA------ATCCCTGCAGTTGATCAAGAGACTG-GGAAATGG--GCA 842
Query 952 CAGG--TGGCTGCAGGAATGGCTTACATCGAGCGCATGAATTATATCCATAGAGATCTGCGATCAGCAAACATT 1023
| ||| |||| |.|||.||
Sbjct 843 ---GTTTGG-----GGAA---------------GTATGGAT--------------------------------- 860
Query 1024 CTAGTGGGGAATG----GACTCATATGCAAGATTGCTGACTTCGGATTGG----CCCGATTGATAGAAGA---C 1086
|||.||| |||||| |||.||..||| |||.| ||||.||| ||||| |
Sbjct 861 ------GGGTATGCTGAGACTCA--------ATTACTCTCTT---ATTAGCTTCCCCGTTTG---GAAGATCCC 914
Query 1087 AATGAGTACACAGCAAGACAAGGTGCAAAGTTCCCCATCAAGTGGACGGCCCCCGAGGCAGCCCTGTACGGGAG 1160
|| |||.|| |||.||.||.|
Sbjct 915 AA-------ACACCA----AAGATGGAAGG-------------------------------------------- 933
Query 1161 GTTCACAATCAAGTCTGACGTGTGGTCTTTTGGAATCTTACTCACAGAGCTGGTCACCAAAGGAAGAGTGCCAT 1234
Sbjct 934 -------------------------------------------------------------------------- 933
Query 1235 ACCCAGGCATGAACAACCGGGAGGTGCTGGAGCAGGTGGAGCGAGGCTACAGGATGCCCTGCCCGCAGGACTGC 1308
Sbjct 934 -------------------------------------------------------------------------- 933
Query 1309 CCCATCTCTCTGCATGAGCTCATGATCCACTGCTGGAAAAAGGACCCTGAAGAACGCCCCACTTTTGAGTACTT 1382
Sbjct 934 -------------------------------------------------------------------------- 933
Query 1383 GCAGAGCTTCCTGGAAGACTACTTTACCGCGACAGAGCCCCAGTACCAACCTGGTGAAAACCTG 1446
Sbjct 934 ---------------------------------------------------------------- 933