Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14704
Subject:
XM_006537659.2
Aligned Length:
2668
Identities:
2293
Gaps:
65

Alignment

Query    1  ATGAGAGAGCTCGTCAACATTCCACTGGTACATATTCTTACTCTGGTTGCCTTCAGCGGAACTGAGAAACTTCC  74
            |||||||||||.|||||||||||||||.||||.||.||.||.|||||||||||||||||.||||||||||||||
Sbjct    1  ATGAGAGAGCTTGTCAACATTCCACTGTTACAGATGCTCACCCTGGTTGCCTTCAGCGGGACTGAGAAACTTCC  74

Query   75  AAAAGCTCCTGTCATCACCACTCCTCTTGAAACAGTGGATGCCTTAGTTGAAGAAGTGGCTACTTTCATGTGTG  148
            ||||||.||||||||||||||.|||||||||||.||.||||||||.|||||||||||.||.|||||||||||||
Sbjct   75  AAAAGCCCCTGTCATCACCACGCCTCTTGAAACTGTAGATGCCTTGGTTGAAGAAGTAGCGACTTTCATGTGTG  148

Query  149  CAGTGGAATCCTACCCCCAGCCTGAGATTTCCTGGACTAGAAATAAAATTCTCATTAAACTCTTTGACACCCGG  222
            |.||||||||||||||.|||||.||||||||.|||||.||||||||||||||||||||.||.|||||||||||.
Sbjct  149  CCGTGGAATCCTACCCTCAGCCCGAGATTTCTTGGACCAGAAATAAAATTCTCATTAAGCTGTTTGACACCCGC  222

Query  223  TACAGCATCCGGGAGAATGGGCAGCTCCTCACCATCCTGAGTGTGGAAGACAGTGATGATGGCATTTACTGCTG  296
            ||||||||||||||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.||||||||
Sbjct  223  TACAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCTGAGCGTGGAAGACAGTGATGATGGCATCTACTGCTG  296

Query  297  CACGGCCAACAATGGTGTGGGAGGAGCTGTGGAGAGTTGTGGAGCCCTGCAAGTGAAGATGAAACCTAAAATAA  370
            ||..|||||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  297  CATAGCCAACAATGGAGTGGGAGGAGCCGTGGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCTAAAATAA  370

Query  371  CTCGCCCTCCCATAAATGTGAAAATAATAGAGGGATTAAAAGCAGTCCTACCATGTACTACAATGGGTAATCCC  444
            ||||.||||||||.|||||.|||||||||||||||||.||.|||||.||.||.||.|||||.||||||||.|||
Sbjct  371  CTCGTCCTCCCATTAATGTAAAAATAATAGAGGGATTGAAGGCAGTTCTGCCGTGCACTACGATGGGTAACCCC  444

Query  445  AAACCATCAGTGTCTTGGATAAAGGGAGACAGCCCTCTCAGGGAAAATTCCCGAATTGCAGTTCTTGAATCTGG  518
            ||||||||.|||||.|||||.|||||.||||...|||||||||||||||||.||||.|||||||||||||||||
Sbjct  445  AAACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCTCAGGGAAAATTCCAGAATCGCAGTTCTTGAATCTGG  518

Query  519  GAGCTTGAGGATTCATAACGTACAAAAGGAAGATGCAGGACAGTATCGATGTGTGGCAAAAAACAGCCTCGGGA  592
            ||||||.|||||.|||||.||.|||||||||||||||||||||||.||.||||||||.|||||||||||.||.|
Sbjct  519  GAGCTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCA  592

Query  593  CAGCATATTCCAAAGTGGTGAAGCTGGAAGTTGAG---------------------------------------  627
            ||||.||.||||||.||||||||||||||||.|||                                       
Sbjct  593  CAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGGCTCTTAATATGACAAATGCCACAGAGAGAGAAGACAGA  666

Query  628  ---------------------GTTTTTGCCAGGATCCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGGCTC  680
                                 ||||||||.||.||||||||.|||||||||||||||||||||||||||||.||
Sbjct  667  GAACCTGAGCAGGACGCTAAAGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTC  740

Query  681  CTTTGTGACCCTGCACTGTACAGCAACAGGCATTCCTGTCCCCACCATCACCTGGATTGAAAACGGAAATGCTG  754
            ||||||.|||||.|.|||.|||||||.||||||.||||||||||||||||.|||||||||||||||||||||||
Sbjct  741  CTTTGTAACCCTACGCTGCACAGCAATAGGCATCCCTGTCCCCACCATCAGCTGGATTGAAAACGGAAATGCTG  814

Query  755  TTTCTTCTGGGTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACTGCAGCTGTTTATCACCAAG  828
            |||||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||.|||||.|||
Sbjct  815  TTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTCATCACAAAG  888

Query  829  CCAGGACTCTACACATGCATAGCTACCAATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCAT  902
            |||||||||||||||||||||||||||||||||||.||.||.|||||||||||.||.||||||||||||||..|
Sbjct  889  CCAGGACTCTACACATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACTGT  962

Query  903  CAGCATAGCAGAATGGAGTAAACCACAGAAAGATAACAAAGGCTACTGCGCCCAGTACAGAGGGGAGGTGTGTA  976
            |||||||||||||||||||||..||||||||||.|.|.||||||||||.||||||||||||||||||||||||.
Sbjct  963  CAGCATAGCAGAATGGAGTAAGTCACAGAAAGACAGCCAAGGCTACTGTGCCCAGTACAGAGGGGAGGTGTGTG  1036

Query  977  ATGCAGTCCTGGCAAAAGATGCTCTTGTTTTTCTCAACACCTCCTATGCGGACCCTGAGGAGGCCCAAGAGCTA  1050
            |||||||||||||.||||||||||||||.||..|||||||||||||...||||||.|||||.|||||.|||||.
Sbjct 1037  ATGCAGTCCTGGCGAAAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGGACCCCGAGGACGCCCAGGAGCTG  1110

Query 1051  CTGGTCCACACGGCCTGGAATGAACTGAAAGTAGTGAGCCCAGTCTGCCGGCCAGCTGCTGAGGCTTTGTTGTG  1124
            |||.|||||||.||.||||||||.|||||.|..|||||.|||.|.|||||||||||||||||||||.||.||||
Sbjct 1111  CTGATCCACACTGCGTGGAATGAGCTGAAGGCTGTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTGCTGTG  1184

Query 1125  TAACCACATCTTCCAGGAGTGCAGTCCTGGAGTAGTGCCTACTCCTATTCCCATTTGCAGAGAGTACTGCTTGG  1198
            |||||||.|||||||.||||||||.||||||||.||.||||||||.||.|||||||||||||||||||||.|||
Sbjct 1185  TAACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTACCTACTCCCATGCCCATTTGCAGAGAGTACTGCCTGG  1258

Query 1199  CAGTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAATGGAAGAGAAGACCCACAGAGGACTCTACAGATCC  1272
            |.|||||||||||||||||.|||||.|||||||.||.||||||||..|||.|||||.|.||.|||||||||||.
Sbjct 1259  CGGTAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCCACCGGGGCCTCTACAGATCT  1332

Query 1273  GAGATGCATTTGCTGTCC-GTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCA  1345
            |.|||||||.|.|| ||| ||.|||||.|||||||||||||||||||||||..||||||||||.|||||..|.|
Sbjct 1333  GGGATGCATCTCCT-TCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAA  1405

Query 1346  GACTGCCACATCTAGATTATAACAAAGAAAACCTAAAAACATTCCCACCAATGACGTCCTCAAAGCCAAGTGTG  1419
            ||||||||.||.||||||||||.|||||||||.|||.|||||||||..||||.||||||||.|.|||.||.|.|
Sbjct 1406  GACTGCCATATTTAGATTATAAAAAAGAAAACATAACAACATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCG  1479

Query 1420  GACATTCCAAATCTGCCTTCCTCCTCCTCTTCTTCCTTCTCTGTCTCACCTACATACTCCATGACTGTAATAAT  1493
            |||||||||||.||||||.|||||.||   ||||||||..|.|||||.|||.|.|||||||||||.||.||.||
Sbjct 1480  GACATTCCAAACCTGCCTGCCTCCACC---TCTTCCTTTGCCGTCTCGCCTGCGTACTCCATGACCGTCATCAT  1550

Query 1494  CTCCATCATGTCCAGCTTTGCAATATTTGTGCTTCTTACCATAACTACTCTCTATTGCTGCCGAAGAAGAAAAC  1567
            |||||||.|||||||||||||..|.||||..|||||.|||||..||||||||||||||||||||||.||.|||.
Sbjct 1551  CTCCATCGTGTCCAGCTTTGCCCTGTTTGCTCTTCTCACCATCGCTACTCTCTATTGCTGCCGAAGGAGGAAAG  1624

Query 1568  AATGGAAAAATAAGAAAAGAGAATCAGCAGCAGTAACCCTCACCACACTGCCTTCTGAGCTCTTACTAGATAGA  1641
            ||||||||||||||||||||||.||..|.||.||.|||||||||||..|||||||.||||||.|.||.|||||.
Sbjct 1625  AATGGAAAAATAAGAAAAGAGAGTCGACCGCGGTGACCCTCACCACGTTGCCTTCCGAGCTCCTGCTGGATAGG  1698

Query 1642  CTTCATCCCAACCCCATGTACCAGAGGATGCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAAG  1715
            ||.|||||||||||||||||||||||||||||.|||||||||||.||.||.||||||||||||||||||||.||
Sbjct 1699  CTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAAGTTGCTCAGCCTGGAGTATCCGAG  1772

Query 1716  GAATAACATTGAATATGTGAGAGACATCGGAGAGGGAGCGTTTGGAAGGGTGTTTCAAGCAAGGGCACCAGGCT  1789
            ||||||||||||.|||||..||||||||||||||||.|||||||||||.||.||.|||||||||||.||.||||
Sbjct 1773  GAATAACATTGAGTATGTCCGAGACATCGGAGAGGGGGCGTTTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCT  1846

Query 1790  TACTTCCCTATGAACCTTTCACTATGGTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGGCAGATATGCAAGCG  1863
            |.||.||.|||||||||||||||||||||||.||.||||||||.||.|||||.|||||.|||||.|||||||||
Sbjct 1847  TGCTGCCTTATGAACCTTTCACTATGGTGGCCGTGAAGATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCG  1920

Query 1864  GACTTTCAGAGGGAGGCAGCCCTCATGGCAGAATTTGACAACCCTAACATTGTGAAGCTATTAGGAGTGTGTGC  1937
            |||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||.||.|||||.||||||||
Sbjct 1921  GACTTTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCCAACATTGTGAAACTCTTAGGTGTGTGTGC  1994

Query 1938  TGTCGGGAAGCCAATGTGCCTGCTCTTTGAATACATGGCCTATGGTGACCTCAATGAGTTCCTCCGCAGCATGT  2011
            .||.||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||.||.||||
Sbjct 1995  CGTTGGGAAGCCGATGTGTCTGCTCTTTGAATATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAAGTATGT  2068

Query 2012  CCCCTCACACCGTGTGCAGCCTCAGTCACAGTGACTTGTCTATGAGGGCTCAGGTCTCCAGCCCTGGGCCCCCA  2085
            ||||.|||||.||.|||||||||||.|||||||||.||||.|.||||||||.|||.||.||||||||.||.|||
Sbjct 2069  CCCCGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCACGAGGGCTCGGGTGTCTAGCCCTGGTCCTCCA  2142

Query 2086  CCCCTCTCCTGTGCTGAGCAGCTTTGCATTGCCAGGCAGGTGGCAGCTGGCATGGCTTACCTCTCAGAACGTAA  2159
            ||.||.||||||||.||.|||||.||||||||||||||||||||||||||||||||.|||||.|||||.||.||
Sbjct 2143  CCACTGTCCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAGAGCGCAA  2216

Query 2160  GTTTGTTCACCGAGATTTAGCCACCAGGAACTGCCTGGTGGGCGAGAACATGGTGGTGAAAATTGCCGACTTTG  2233
            ||||||.|||||.||.|||||.|||||||||||||||||.||.||||.||||||||||||||||||.|||||||
Sbjct 2217  GTTTGTCCACCGGGACTTAGCTACCAGGAACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTGCAGACTTTG  2290

Query 2234  GCCTCTCCAGGAACATCTACTCAGCAGACTACTACAAAGCTAATGAAAACGACGCTATCCCTATCCGTTGGATG  2307
            |||||||||||||||||||.||.||||||||||||||||||.|||.|||.|||||.|||||||||||.||||||
Sbjct 2291  GCCTCTCCAGGAACATCTATTCCGCAGACTACTACAAAGCTGATGGAAATGACGCCATCCCTATCCGCTGGATG  2364

Query 2308  CCACCAGAGTCCATTTTTTATAACCGCTACACTACAGAGTCTGATGTGTGGGCCTATGGCGTGGTCCTCTGGGA  2381
            ||.||.|||||.||.||.||.|||||||||||.||.|||||.|||||.|||||||||||.||||||||||||||
Sbjct 2365  CCGCCCGAGTCTATCTTCTACAACCGCTACACCACTGAGTCGGATGTATGGGCCTATGGTGTGGTCCTCTGGGA  2438

Query 2382  GATCTTCTCCTATGGCCTGCAGCCCTACTATGGGATGGCCCATGAGGAGGTCATTTACTACGTGCGAGATGGCA  2455
            |||||||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||.|||.|||||||||
Sbjct 2439  GATCTTCTCCTATGGGCTGCAGCCCTACTATGGAATGGCCCACGAGGAGGTCATTTACTATGTGAGAGATGGCA  2512

Query 2456  ACATCCTCTCCTGCCCTGAGAACTGCCCCGTGGAGCTGTACAATCTCATGCGTCTATGTTGGAGCAAGCTGCCT  2529
            ||||||||.||||||||||||||||||||.||||.||||||||.||||||||.||.||||||||||||||||||
Sbjct 2513  ACATCCTCGCCTGCCCTGAGAACTGCCCCTTGGAACTGTACAACCTCATGCGCCTGTGTTGGAGCAAGCTGCCT  2586

Query 2530  GCAGACAGACCCAGTTTCACCAGTATTCACCGAATTCTGGAACGCATGTGTGAGAGGGCAGAGGGAACTGTGAG  2603
            ||.||.||||||||.|||..||||||.|||.|.||.|||.|.||||||||.|||||.|||||||||||.|||.|
Sbjct 2587  GCTGATAGACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGG  2660

Query 2604  TGTC  2607
            ||||
Sbjct 2661  TGTC  2664

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