Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14741
• Subject: XM_017023277.1
• Aligned Length: 1357
• Identities: 961
• Gaps: 377

Alignment

Query    1  ATGGCCAGGACCACCAGCCAGCTGTATGACGCCGTGCCCATCCAGTCCAGCGTGGTGTTATGTTCCTGCCCATC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCATCAATGGTGAGGACCCAGACTGAGTCCAGCACGCCCCCTGGCATTCCTGGTGGCAGCAGGCAGGGCCCCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCATGGACGGCACTGCAGCCGAGCCTCGGCCCGGCGCCGGCTCCCTGCAGCATGCCCAGCCTCCGCCGCAGCCT  222
                                                               ||||.||.||             
Sbjct    1  ---------------------------------------------------ATGCACATCC-------------  10

Query  223  CGGAAGAAGCGGCCTGAGGACTTCA-AG-TTTGGGAA----AATCCTTGGGGAAGGCTCTTTTTCCACGGTTGT  290
                |||               ||| || |||.||||    ||         |||  ||||             
Sbjct   11  ----AGA---------------TCACAGATTTTGGAACAGCAA---------AAG--TCTT-------------  41

Query  291  CCTGGCTCGAGAACTGGCAACCTCCAGAGAATATGCGA-----CCAGGGCCAACTCATTCGTGGGAACAGCGCA  359
                               |.|.|||||||    ||.|     |||||||||||||||||||||||||||||||
Sbjct   42  -------------------ATCCCCAGAGA----GCAAACAAGCCAGGGCCAACTCATTCGTGGGAACAGCGCA  92

Query  360  GTACGTTTCTCCAGAGCTGCTCACGGAGAAGTCCGCCTGTAAGAGTTCAGACCTTTGGGCTCTTGGATGCATAA  433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   93  GTACGTTTCTCCAGAGCTGCTCACGGAGAAGTCCGCCTGTAAGAGTTCAGACCTTTGGGCTCTTGGATGCATAA  166

Query  434  TATACCAGCTTGTGGCAGGACTCCCACCATTCCGAGCTGGAAACGAGTATCTTATATTTCAGAAGATCATTAAG  507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  167  TATACCAGCTTGTGGCAGGACTCCCACCATTCCGAGCTGGAAACGAGTATCTTATATTTCAGAAGATCATTAAG  240

Query  508  TTGGAATATGACTTTCCAGAAAAATTCTTCCCTAAGGCAAGAGACCTCGTGGAGAAACTTTTGGTTTTAGATGC  581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  TTGGAATATGACTTTCCAGAAAAATTCTTCCCTAAGGCAAGAGACCTCGTGGAGAAACTTTTGGTTTTAGATGC  314

Query  582  CACAAAGCGGTTAGGCTGTGAGGAAATGGAAGGATACGGACCTCTTAAAGCACACCCGTTCTTCGAGTCCGTCA  655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  315  CACAAAGCGGTTAGGCTGTGAGGAAATGGAAGGATACGGACCTCTTAAAGCACACCCGTTCTTCGAGTCCGTCA  388

Query  656  CGTGGGAGAACCTGCACCAGCAGACGCCTCCGAAGCTCACCGCTTACCTGCCGGCTATGTCGGAAGACGACGAG  729
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  389  CGTGGGAGAACCTGCACCAGCAGACGCCTCCGAAGCTCACCGCTTACCTGCCGGCTATGTCGGAAGACGACGAG  462

Query  730  GACTGCTATGGCAATTATGACAATCTCCTGAGCCAGTTTGGCTGCATGCAGGTGTCTTCGTCCTCCTCCTCACA  803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  463  GACTGCTATGGCAATTATGACAATCTCCTGAGCCAGTTTGGCTGCATGCAGGTGTCTTCGTCCTCCTCCTCACA  536

Query  804  CTCCCTGTCAGCCTCCGACACGGGCCTGCCCCAGAGGTCAGGCAGCAACATAGAGCAGTACATTCACGATCTGG  877
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  537  CTCCCTGTCAGCCTCCGACACGGGCCTGCCCCAGAGGTCAGGCAGCAACATAGAGCAGTACATTCACGATCTGG  610

Query  878  ACTCGAACTCCTTTGAACTGGACTTACAGTTTTCCGAAGATGAGAAGAGGTTGTTGTTGGAGAAGCAGGCTGGC  951
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  611  ACTCGAACTCCTTTGAACTGGACTTACAGTTTTCCGAAGATGAGAAGAGGTTGTTGTTGGAGAAGCAGGCTGGC  684

Query  952  GGAAACCCTTGGCACCAGTTTGTAGAAAATAATTTAATACTAAAGATGGGCCCAGTGGATAAGCGGAAGGGTTT  1025
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  685  GGAAACCCTTGGCACCAGTTTGTAGAAAATAATTTAATACTAAAGATGGGCCCAGTGGATAAGCGGAAGGGTTT  758

Query 1026  ATTTGCAAGACGACGACAGCTGTTGCTCACAGAAGGACCACATTTATATTATGTGGATCCTGTCAACAAAGTTC  1099
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  759  ATTTGCAAGACGACGACAGCTGTTGCTCACAGAAGGACCACATTTATATTATGTGGATCCTGTCAACAAAGTTC  832

Query 1100  TGAAAGGTGAAATTCCTTGGTCACAAGAACTTCGACCAGAGGCCAAGAATTTTAAAACTTTCTTTGTCCACACG  1173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  833  TGAAAGGTGAAATTCCTTGGTCACAAGAACTTCGACCAGAGGCCAAGAATTTTAAAACTTTCTTTGTCCACACG  906

Query 1174  -----------CCTAACAGGACGTATTATCTG-----------ATGG-----------ACCCCAGCGGGAACGC  1214
                       ||   |||   |.||| ||||           ||||           |||.| |.||||| ||
Sbjct  907  GTGAGTCTGTTCC---CAG---GGATT-TCTGTGTGCAGGGTAATGGGAGGGCTTTGCACCAC-GTGGGAA-GC  971

Query 1215  A--CACAAG---TGGTGC---AGGAAGATCCAG-GAGGTTTGGAGGCAGC-----------------GATACCA  1262
            |  ||||.|   ||  ||   |||.||   ||| |.||.|.|| ||||||                 .||.|||
Sbjct  972  AGCCACAGGCCTTG--GCCAGAGGGAG---CAGCGGGGATCGG-GGCAGCTGCCTCGCCCTTTCCGACATCCCA  1039

Query 1263  GAGCCACCCGGACGCCGCTGTGCAG  1287
            ||  |.|||..||            
Sbjct 1040  GA--CGCCCACAC------------  1050