Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14756
Subject:
XM_006508172.3
Aligned Length:
1221
Identities:
793
Gaps:
333

Alignment

Query    1  ATGACGCTGGACGTGGGGCCGGAGGATGAGCTGCCCGACTGGGCCGCCGCCAAAGAGTTTTACCAGAAGTACGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCTAAGGACGTCATCGGCAGAGGAGTGAGCTCTGTGGTCCGCCGTTGTGTTCATCGAGCTACTGGCCACGAGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGCGGTGAAGATTATGGAAGTGACAGCTGAGCGGCTGAGTCCTGAGCAGCTGGAGGAGGTGCGGGAAGCCACA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGGCGAGAGACACACATCCTTCGCCAGGTCGCCGGCCACCCCCACATCATCACCCTCATCGATTCCTACGAGTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TTCTAGCTTCATGTTCCTGGTGTTTGACCTGATGCGGAAGGGAGAGCTGTTTGACTATCTCACAGAGAAGGTGG  370
                                           ||||||||.|||||||||||||||||||||||.|||||.||||
Sbjct    1  -------------------------------ATGCGGAAAGGAGAGCTGTTTGACTATCTCACCGAGAAAGTGG  43

Query  371  CCCTCTCTGAAAAGGAAACCAGGTCCATCATGCGGTCTCTGCTGGAAGCAGTGAGCTTTCTCCATGCCAACAAC  444
            |||||||.||||||||||||||||||||||||.|||||||.|||||||||||||||||||||||||||||||||
Sbjct   44  CCCTCTCAGAAAAGGAAACCAGGTCCATCATGAGGTCTCTACTGGAAGCAGTGAGCTTTCTCCATGCCAACAAC  117

Query  445  ATTGTGCATCGAGATCTGAAGCCCGAGAATATTCTCCTAGATGACAATATGCAGATCCGACTTTCAGATTTCGG  518
            |||||.||||||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||.||
Sbjct  118  ATTGTACATCGAGACCTGAAGCCTGAGAATATTCTCCTAGATGACAATATGCAGATACGCCTTTCAGATTTTGG  191

Query  519  GTTCTCCTGCCACTTGGAACCTGGCGAGAAGCTTCGAGAGTTGTGTGGGACCCCAGGGTATCTAGCGCCAGAGA  592
            ||||||||||||.||||||.|||||||||||||||||||..||||.|||||.||||||||||||||.|||||||
Sbjct  192  GTTCTCCTGCCATTTGGAAGCTGGCGAGAAGCTTCGAGAACTGTGCGGGACTCCAGGGTATCTAGCACCAGAGA  265

Query  593  TCCTTAAATGCTCCATGGATGAAACCCACCCAGGCTATGGCAAGGAGGTCGACCTCTGGGCCTGTGGGGTGATC  666
            ||||||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||.||||||||||||
Sbjct  266  TCCTTAAATGCTCCATGGATGAAACCCACCCAGGCTATGGCAAGGAAGTTGATCTCTGGGCTTGTGGGGTGATC  339

Query  667  TTGTTCACACTCCTGGCTGGCTCGCCACCCTTCTGGCACCGGCGGCAGATCCTGATGTTACGCATGATCATGGA  740
            .||||||||||.|||||||||||.|||||.||||||||||||||.||.|||||||||.||||||||||||||||
Sbjct  340  CTGTTCACACTTCTGGCTGGCTCACCACCATTCTGGCACCGGCGCCAAATCCTGATGCTACGCATGATCATGGA  413

Query  741  GGGCCAGTACCAGTTCAGTTCCCCCGAGTGGGATGACCGTTCCAGCACTGTCAAAGACCTGATCTCCAGGCTGC  814
            .|||||.||.|||||.|.|||.||.|||||||||||.|||||.|.|||.|||||||||||||||||||.|||||
Sbjct  414  AGGCCAATATCAGTTTACTTCACCTGAGTGGGATGATCGTTCAAACACCGTCAAAGACCTGATCTCCAAGCTGC  487

Query  815  TGCAGGTGGATCCTGAGGCACGCCTGACAGCTGAGCAGGCCCTACAGCACCCCTTCTTTGAGCGTTGTGAAGGC  888
            ||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||||||
Sbjct  488  TGCAGGTGGATCCTGAAGCGCGCCTGACAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTGAGCGCTGTGAAGGC  561

Query  889  AGCCAACCCTGGAACCTCACCCCCCGCCAGCGGTTCCGGGTGGCAGTGTGGACAGTGCTGGCTGCTGGACGAGT  962
            ||||||||.|||||||||||.||.||||||||||||||||||||||||||||||.|.||||||||.||||||||
Sbjct  562  AGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGGGTGGCAGTGTGGACAATACTGGCTGCCGGACGAGT  635

Query  963  GGCCCTAAGCACCCATCGTGTACGGCCACTGACCAAGAATGCACTGTTGAGGGACCCTTATGCGCTGCGGTCAG  1036
            ||||.||||||..||.|||.||||||||||.||.|||||||||||.|||||.|||||.|||||.||||||.|||
Sbjct  636  GGCCTTAAGCAGTCACCGTTTACGGCCACTAACTAAGAATGCACTATTGAGAGACCCCTATGCACTGCGGCCAG  709

Query 1037  TGCGGCACCTCATCGACAACTGTGCCTTCCGGCTCTACGGGCACTGGGTAAAGAAAGGGGAGCAGCAGAACCGG  1110
            |.||||.||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||||
Sbjct  710  TACGGCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGGTGAGCAGCAGAACCGG  783

Query 1111  GCGGCTCTCTTTCAGCACCGGCCCCCTGGGCCTTTTCCCATCATGG--GCC-CTGAAGAGGAGGGAGACTCTGC  1181
            ||.||.|||||.|||||||.|||.|||.|| ||.|||||  |||.|  ||| |||||...||.||||||||.|.
Sbjct  784  GCAGCCCTCTTCCAGCACCAGCCTCCTAGG-CTGTTCCC--CATTGCTGCCACTGAACTCGAAGGAGACTCCGG  854

Query 1182  TGCTATAACTGAGGATGAGGCCGTGCTTGTGCTGGGC  1218
            |||.||.||.|||||||||||....||.||.|.|.||
Sbjct  855  TGCCATCACAGAGGATGAGGCTACACTGGTACGGAGC  891