Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14805
• Subject: XM_006534950.4
• Aligned Length: 1404
• Identities: 723
• Gaps: 585

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACCTTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAAACACGTGGATGTGTCATCTATTGCCAAACATTACAACATGAGCAAAAGCAAGGTGGACAACCAGTTCTACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGTGGAAGTGGGGGACTCAACCTTCACCGTTCTTAAGCGCTACCAGAACCTGAAGCCAATTGGCTCTGGGGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGGGAATAGTCTGTGCTGCGTACGACGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCAGAACCAAACTCACGCCAAGAGGGCTTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA  370

Query    1  -----------------------------------------------------------------ATGGAACTG  9
                                                                             |||||||||
Sbjct  371  TTAGCTTATTAAATGTTTTTACACCCCAGAAAACACTGGAGGAGTTCCAAGATGTCTACTTAGTGATGGAACTG  444

Query   10  ATGGATGCCAACTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAAT  83
            |||||.||||||.|.|||||.||||||||||||||..|.|||||.|||||.|||||||||.||||||||||.||
Sbjct  445  ATGGACGCCAACCTGTGTCAGGTGATTCAGATGGAGCTGGACCACGAGCGGATGTCTTACTTGCTGTACCAGAT  518

Query   84  GTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTCA  157
            |.||||||||||.|||||||||||.||.|||||.||.||.||||||||.||||||||.||||||||||||||||
Sbjct  519  GCTGTGTGGCATCAAGCACCTCCACTCCGCTGGGATCATCCACAGGGACTTAAAACCCAGTAACATTGTAGTCA  592

Query  158  AGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCCA  231
            ||||||||||||||.||||||||||.|||||.|||||||||||||||||.||.||||||||||||||||||||.
Sbjct  593  AGTCTGATTGCACACTGAAAATCCTCGACTTCGGACTGGCCAGGACAGCGGGTACAAGCTTCATGATGACTCCG  666

Query  232  TATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACGTGGATATATG  305
            |||||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||||||||.||..|.||
Sbjct  667  TATGTGGTGACGCGATATTACAGAGCCCCTGAGGTCATCCTGGGCATGGGCTACAAGGAGAACGTTGACCTGTG  740

Query  306  GTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAAAA-------TCCTCTTTCCAGGAAGGGACTATATT  372
            |||.||.||.|||||.||||||||||||||       ||||       |.||.||.||.||.|..||..|||||
Sbjct  741  GTCAGTAGGGTGCATCATGGGAGAAATGGT-------AAAAGGCACAGTGCTGTTCCCTGGCACTGATCATATT  807

Query  373  GACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAGAATTCATGAAGAAATTGCAACCCACAGT  446
            |||||||||||.||.||.||.||.||.||||||||.||.||||||||.|||||||||||||||||.||||||||
Sbjct  808  GACCAGTGGAACAAAGTCATCGAGCAGCTAGGAACTCCGTGTCCAGAGTTCATGAAGAAATTGCAGCCCACAGT  881

Query  447  AAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCCCCAAACTCTTCCCAGATTCCCTCTTCC  520
            .||||||||.||||||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||
Sbjct  882  CAGAAACTACGTGGAGAATCGGCCCAAGTACGCAGGACTCACCTTCCCCAAGCTCTTTCCAGATTCCCTCTTCC  955

Query  521  CAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGACTTGTTGTCAAAGATGCTAGTGATTGAC  594
            |||||||.||.||||||||||||||.||||||||||||||||||||.||||||||.||||||.|||||||||||
Sbjct  956  CAGCGGATTCTGAGCACAATAAACTTAAAGCCAGCCAAGCCAGGGATTTGTTGTCTAAGATGTTAGTGATTGAC  1029

Query  595  CCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACATCAACGTCTGGTATGACCCAGCCGAAGT  668
            |||||.||.||.|||||.|||||||||||..|.||||||||.|||||||||||.|||||.|||||.||.|||||
Sbjct 1030  CCAGCGAAGAGGATATCGGTGGACGACGCACTGCAGCATCCGTACATCAACGTTTGGTACGACCCGGCTGAAGT  1103

Query  669  GGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAGAACACACAATTGAAGAATGGAAAGAAC  742
            ||||||||||||.||||||||||||||.||||||.||||||||||.||.|||||.||.||||||||||||||||
Sbjct 1104  GGAGGCGCCTCCGCCTCAGATATATGATAAGCAGCTGGATGAAAGGGAGCACACCATCGAAGAATGGAAAGAAC  1177

Query  743  TTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGTGTAGTAAAAGGACAGCCTTCTCCTT--  814
            |||||||||||||.||||||||.||||||||.||||||||.|||||.|||||.|||||.|||||.||.||||  
Sbjct 1178  TTATCTACAAGGAGGTAATGAACTCAGAAGAGAAGACTAAGAATGGCGTAGTCAAAGGCCAGCCCTCGCCTTCA  1251

Query  815  ---CAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCGTCTGTCAATGACATCTCCTCCATGTCC  885
               ||||||||||||                                                           
Sbjct 1252  GCACAGGTGCAGCAG-----------------------------------------------------------  1266

Query  886  ACCGACCAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCTCGGCAGGACCCCTGGGTTGTTGCAGG  957
                                                                                    
Sbjct 1267  ------------------------------------------------------------------------  1266