Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14824
Subject:
NM_001330234.2
Aligned Length:
1257
Identities:
690
Gaps:
567

Alignment

Query    1  ATGAAGAACTATAAAGCAATTGGCAAAATAGGAGAGGGAACGTTTTCTGAAGTTATGAAGATGCAAAGCCTGAG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGAACTATAAAGCAATTGGCAAAATAGGAGAGGGAACGTTTTCTGAAGTTATGAAGATGCAAAGCCTGAG  74

Query   75  AGATGGAAACTACTATGCATGTAAACAAATGAAGCAGCGCTTTGAAAGTATTGAGCAAGTCAACAACCTACGAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGATGGAAACTACTATGCATGTAAACAAATGAAGCAGCGCTTTGAAAGTATTGAGCAAGTCAACAACCTACGAG  148

Query  149  AGATCCAAGCACTGAGGCGCCTGAATCCGCACCCAAACATTCTTATGTTGCATGAAGTGGTTTTTGACAGAAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGATCCAAGCACTGAGGCGCCTGAATCCGCACCCAAACATTCTTATGTTGCATGAAGTGGTTTTTGACAGAAAA  222

Query  223  TCTGGTTCTCTTGCACTAATATGTGAACTTATGGACATGAATATTTATGAGCTAATACGAGGGAGAAGATACCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCTGGTTCTCTTGCACTAATATGTGAACTTATGGACATGAATATTTATGAGCTAATACGAGGGAGAAGATACCC  296

Query  297  ATTATCAGAAAAAAAAATTATGCACTATATGTACCAGTTATGTAAGTCCCTGGATCATATTCACAGAAATGGAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATTATCAGAAAAAAAAATTATGCACTATATGTACCAGTTATGTAAGTCCCTGGATCATATTCACAGAAATGGAA  370

Query  371  TATTTCACAGAGATGTAAAACCAGAAAATATACTAATAAAGCAGGATGTCCTGAAATTAGGGGACTTTGGCTCC  444
            |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct  371  TATTTCACAGAGATGTAAAACCAGAAAATATACTAATAA---AGGATGTCCTGAAATTAGGGGACTTTGGCTCC  441

Query  445  TGCCGGAGTGTCTATTCCAAGCAGCCGTACACGGAATACATCTCCACCCGCTGGTACCGGGCCCCGGAGTGTCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  442  TGCCGGAGTGTCTATTCCAAGCAGCCGTACACGGAATACATCTCCACCCGCTGGTACCGGGCCCCGGAGTGTCT  515

Query  519  CCTCACTGATGGGTTCTACACGTACAAGATGGACCTGTGGAGCGCCGGCTGTGTGTTCTACGAGATCGCCAGTC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  516  CCTCACTGATGGGTTCTACACGTACAAGATGGACCTGTGGAGCGCCGGCTGTGTGTTCTACGAGATCGCCAGTC  589

Query  593  TGCAGCCCCTCTTTCCTGGAGTAAATGAACTGGACCAAATCTCAAAAATCCACGATGTCATCGGCACACCCGCT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  590  TGCAGCCCCTCTTTCCTGGAGTAAATGAACTGGACCAAATCTCAAAAATCCACGATGTCATCGGCACACCCGCT  663

Query  667  CAGAAGATCCTCACCAAGTTCAAACAG-----------------------------------------------  693
            |||||||||||||||||||||||||||                                               
Sbjct  664  CAGAAGATCCTCACCAAGTTCAAACAGTCGAGAGCTATGAATTTTGATTTTCCTTTTAAAAAGGGATCAGGAAT  737

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct  738  ACCTCTACTAACAACCAATTTGTCCCCACAATGCCTCTCCCTCCTGCACGCAATGGTGGCCTATGATCCCGATG  811

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct  812  AGAGAATCGCCGCCCACCAGGCCCTGCAGCACCCCTACTTCCAAGAACAGAGGAAAACAGAGAAGCGGGCTCTG  885

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct  886  GGCAGCCACAGAAAAGCTGGCTTTCCGGAGCACCCTGTGGCACCGGAACCACTCAGTAACAGCTGCCAGATTTC  959

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct  960  CAAGGAGGGCAGAAAGCAGAAACAGTCCCTAAAGCAAGAGGAGGACCGTCCCAAGAGACGAGGACCGGCCTATG  1033

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1034  TCATGGAACTGCCCAAACTAAAGCTTTCGGGAGTGGTCAGACTGTCGTCTTACTCCAGCCCCACGCTGCAGTCC  1107

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1108  GTGCTTGGATCTGGAACAAATGGAAGAGTGCCGGTGCTGAGACCCTTGAAGTGCATCCCTGCGAGCAAGAAGAC  1181

Query  694  -------------------------------------------------------------------------  693
                                                                                     
Sbjct 1182  AGATCCGCAGAAGGACCTTAAGCCTGCCCCGCAGCAGTGTCGCCTGCCCACCATAGTGCGGAAAGGCGGAAGA  1254